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DESCRIPTION
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DESCRIPTION
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Package: metacoder
Title: Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data
Version: 0.3.7
Authors@R: c(person("Zachary", "Foster", email =
"zacharyfoster1989@gmail.com", role = c("aut", "cre")),
person("Niklaus", "Grunwald", email =
"grunwaln@science.oregonstate.edu", role = c("ths")),
person("Rob", "Gilmore", email = "rgilmore@ummc.edu",
role = "ctb"))
Maintainer: Zachary Foster <zacharyfoster1989@gmail.com>
Description: A set of tools for parsing, manipulating, and graphing data
classified by a hierarchy (e.g. a taxonomy).
Depends:
R (>= 3.0.2)
License: GPL-2 | GPL-3
LazyData: true
URL: https://grunwaldlab.github.io/metacoder_documentation/
BugReports: https://github.com/grunwaldlab/metacoder/issues
Imports:
stringr,
ggplot2,
igraph,
grid,
taxize,
seqinr,
RCurl,
ape,
stats,
grDevices,
utils,
lazyeval,
dplyr,
magrittr,
readr,
rlang,
ggfittext,
vegan,
cowplot,
GA,
Rcpp,
crayon,
tibble,
R6
Suggests:
knitr,
rmarkdown,
testthat,
zlibbioc,
BiocManager,
phyloseq,
phylotate,
traits,
biomformat,
DESeq2
VignetteBuilder: knitr
RoxygenNote: 7.3.1
Date: 2024-02-19
Encoding: UTF-8
biocViews:
LinkingTo: Rcpp