From 3bfb09f9f487a0bce571d63f5661ac4b879c4573 Mon Sep 17 00:00:00 2001 From: graik Date: Sat, 11 Jun 2016 21:34:23 +0300 Subject: [PATCH] update copyright --- Biskit/AmberCrdEntropist.py | 2 +- Biskit/AmberCrdParser.py | 2 +- Biskit/AmberEntropist.py | 2 +- Biskit/AmberEntropyMaster.py | 2 +- Biskit/AmberEntropySlave.py | 2 +- Biskit/AmberParmBuilder.py | 2 +- Biskit/AmberRstParser.py | 2 +- Biskit/BioUnit.py | 2 +- Biskit/BisList.py | 2 +- Biskit/Blast2Seq.py | 2 +- Biskit/ColorSpectrum.py | 2 +- Biskit/CommandLine.py | 2 +- Biskit/DSSP.py | 2 +- Biskit/DictList.py | 2 +- Biskit/Dock/Analyzer.py | 2 +- Biskit/Dock/Complex.py | 2 +- Biskit/Dock/ComplexEvolving.py | 2 +- Biskit/Dock/ComplexEvolvingList.py | 2 +- Biskit/Dock/ComplexList.py | 2 +- Biskit/Dock/ComplexModelRegistry.py | 2 +- Biskit/Dock/ComplexRandomizer.py | 2 +- Biskit/Dock/ComplexTraj.py | 2 +- Biskit/Dock/ContactMaster.py | 2 +- Biskit/Dock/ContactSlave.py | 2 +- Biskit/Dock/Docker.py | 2 +- Biskit/Dock/FixedList.py | 2 +- Biskit/Dock/HexParser.py | 2 +- Biskit/Dock/Intervor.py | 2 +- Biskit/Dock/XRefineComplex.py | 2 +- Biskit/Dock/__init__.py | 2 +- Biskit/Dock/delphiBindingEnergy.py | 2 +- Biskit/Dock/hexTools.py | 2 +- Biskit/Dock/settings.py | 2 +- Biskit/EnsembleTraj.py | 2 +- Biskit/ErrorHandler.py | 2 +- Biskit/Errors.py | 2 +- Biskit/ExeConfig.py | 2 +- Biskit/ExeConfigCache.py | 2 +- Biskit/Executor.py | 2 +- Biskit/Fold_X.py | 2 +- Biskit/Hmmer.py | 2 +- Biskit/IcmCad.py | 2 +- Biskit/LocalPath.py | 2 +- Biskit/LogFile.py | 2 +- Biskit/MatrixPlot.py | 2 +- Biskit/Mod/Aligner.py | 2 +- Biskit/Mod/AlignerMaster.py | 2 +- Biskit/Mod/AlignerSlave.py | 2 +- Biskit/Mod/Analyse.py | 2 +- Biskit/Mod/Benchmark.py | 2 +- Biskit/Mod/CheckIdentities.py | 2 +- Biskit/Mod/ModelMaster.py | 2 +- Biskit/Mod/ModelSlave.py | 2 +- Biskit/Mod/Modeller.py | 2 +- Biskit/Mod/TemplateCleaner.py | 2 +- Biskit/Mod/TemplateFilter.py | 2 +- Biskit/Mod/TemplateSearcher.py | 2 +- Biskit/Mod/ValidationSetup.py | 2 +- Biskit/Mod/__init__.py | 2 +- Biskit/Mod/modUtils.py | 2 +- Biskit/Mod/settings.py | 2 +- Biskit/Model.py | 2 +- Biskit/ModelList.py | 2 +- Biskit/PCRModel.py | 2 +- Biskit/PDBCleaner.py | 2 +- Biskit/PDBDope.py | 2 +- Biskit/PDBModel.py | 2 +- Biskit/PDBParseFile.py | 2 +- Biskit/PDBParseModel.py | 2 +- Biskit/PDBParseNCBI.py | 2 +- Biskit/PDBParsePickle.py | 2 +- Biskit/PDBParser.py | 2 +- Biskit/PDBParserFactory.py | 2 +- Biskit/PVM/ExampleMaster.py | 2 +- Biskit/PVM/ExampleSlave.py | 2 +- Biskit/PVM/Status.py | 2 +- Biskit/PVM/TrackingJobMaster.py | 2 +- Biskit/PVM/__init__.py | 2 +- Biskit/PVM/pvm.py | 2 +- Biskit/Polymer.py | 2 +- Biskit/ProfileCollection.py | 2 +- Biskit/ProfileMirror.py | 2 +- Biskit/Prosa2003.py | 2 +- Biskit/Pymoler.py | 2 +- Biskit/QualMaster.py | 2 +- Biskit/QualSlave.py | 2 +- Biskit/Ramachandran.py | 2 +- Biskit/ReduceCoordinates.py | 2 +- Biskit/SettingsManager.py | 2 +- Biskit/SettingsParser.py | 2 +- Biskit/SparseArray.py | 2 +- Biskit/StructureMaster.py | 2 +- Biskit/StructureSlave.py | 2 +- Biskit/SurfaceRacer.py | 2 +- Biskit/TrajCluster.py | 2 +- Biskit/TrajFlexMaster.py | 2 +- Biskit/TrajFlexSlave.py | 2 +- Biskit/Trajectory.py | 2 +- Biskit/WhatIf.py | 2 +- Biskit/XplorInput.py | 2 +- Biskit/Xplorer.py | 2 +- Biskit/amberResidueLibrary.py | 2 +- Biskit/amberResidues.py | 2 +- Biskit/atomCharger.py | 2 +- Biskit/decorators.py | 2 +- Biskit/delphi.py | 2 +- Biskit/deprecated/ChainCleaner.py | 2 +- Biskit/deprecated/ChainSeparator.py | 2 +- Biskit/deprecated/ChainWriter.py | 2 +- Biskit/hist.py | 2 +- Biskit/match2seq.py | 2 +- Biskit/mathUtils.py | 2 +- Biskit/molTools.py | 2 +- Biskit/molUtils.py | 2 +- Biskit/msms.py | 2 +- Biskit/plotUtils.py | 2 +- Biskit/reduce.py | 2 +- Biskit/residue.py | 2 +- Biskit/settings.py | 2 +- Biskit/surfaceRacerTools.py | 2 +- Biskit/test.py | 2 +- Biskit/tmalign.py | 2 +- scripts/Biskit/1pdb2model.py | 2 +- scripts/Biskit/am_restartMD.py | 2 +- scripts/Biskit/amber2traj.py | 2 +- scripts/Biskit/amberConcat.py | 2 +- scripts/Biskit/amber_ensembleMD.py | 2 +- scripts/Biskit/amber_pdb2parm.py | 2 +- scripts/Biskit/averageASA.py | 2 +- scripts/Biskit/castPdbs.py | 2 +- scripts/Biskit/cvsrm.py | 2 +- scripts/Biskit/dope.py | 2 +- scripts/Biskit/echoTestRoot.py | 2 +- scripts/Biskit/fix_array_constructor.py | 2 +- scripts/Biskit/getSS.py | 2 +- scripts/Biskit/killpp.py | 2 +- scripts/Biskit/model2pdb.py | 2 +- scripts/Biskit/pcr_crd2pdb.py | 2 +- scripts/Biskit/pdb2model.py | 2 +- scripts/Biskit/pdb2seq.py | 2 +- scripts/Biskit/pdb2traj.py | 2 +- scripts/Biskit/reduceTraj.py | 2 +- scripts/Biskit/redump.py | 2 +- scripts/Biskit/relocalize.py | 2 +- scripts/Biskit/replace_wildcard_import.py | 2 +- scripts/Biskit/restartPVM.py | 2 +- scripts/Biskit/rm_pvm.py | 2 +- scripts/Biskit/runPcr.py | 2 +- scripts/Biskit/thinTraj.py | 2 +- scripts/Biskit/traj2ensemble.py | 2 +- scripts/Biskit/trajAddNames.py | 2 +- scripts/Biskit/trajFluct.py | 2 +- scripts/Biskit/trajpool2ensemble.py | 2 +- scripts/Biskit/xload.py | 2 +- scripts/Dock/PCR2hex.py | 2 +- scripts/Dock/concat_complexLists.py | 2 +- scripts/Dock/contacter.py | 2 +- scripts/Dock/delphiBinding.py | 2 +- scripts/Dock/hex2complex.py | 2 +- scripts/Dock/hexInput.py | 2 +- scripts/Dock/hexResults.py | 2 +- scripts/Dock/inspectComplexList.py | 2 +- scripts/Dock/multidock.py | 2 +- scripts/Dock/pdb2complex.py | 2 +- scripts/Dock/reduceComplexList.py | 2 +- scripts/Dock/selectModels.py | 2 +- scripts/Mod/align.py | 2 +- scripts/Mod/align_parallel.py | 2 +- scripts/Mod/analyse.py | 2 +- scripts/Mod/benchmark.py | 2 +- scripts/Mod/clean_templates.py | 2 +- scripts/Mod/model.py | 2 +- scripts/Mod/model_for_docking.py | 2 +- scripts/Mod/model_parallel.py | 2 +- scripts/Mod/modelling_example.py | 2 +- scripts/Mod/search_sequences.py | 2 +- scripts/Mod/search_templates.py | 2 +- scripts/Mod/setup_validation.py | 2 +- scripts/analysis/a_baharEntropy.py | 2 +- scripts/analysis/a_baharFluct.py | 2 +- scripts/analysis/a_cad.py | 2 +- scripts/analysis/a_comEntropy.py | 2 +- scripts/analysis/a_compare_rms_vs_fnc.py | 2 +- scripts/analysis/a_dasa.py | 2 +- scripts/analysis/a_ensemble.py | 2 +- scripts/analysis/a_foldX.py | 2 +- scripts/analysis/a_model_rms.py | 2 +- scripts/analysis/a_multiDock.py | 2 +- scripts/analysis/a_multidock_contour.py | 2 +- scripts/analysis/a_random_contacting.py | 2 +- scripts/analysis/a_report_comEntropy.py | 2 +- scripts/analysis/a_rmsd_vs_dock_performance.py | 2 +- scripts/analysis/a_rmsd_vs_performance.py | 2 +- scripts/analysis/a_table_fnac_rms_score.py | 2 +- scripts/analysis/a_trajEntropy.py | 2 +- scripts/analysis/a_trajQuality.py | 2 +- scripts/analysis/random_complexes.py | 2 +- scripts/analysis/random_grouping.py | 2 +- scripts/deprecated/pdb2xplor.py | 2 +- 199 files changed, 199 insertions(+), 199 deletions(-) diff --git a/Biskit/AmberCrdEntropist.py b/Biskit/AmberCrdEntropist.py index b2a5691..67a50e1 100644 --- a/Biskit/AmberCrdEntropist.py +++ b/Biskit/AmberCrdEntropist.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/AmberCrdParser.py b/Biskit/AmberCrdParser.py index 33d9978..dc7bd28 100644 --- a/Biskit/AmberCrdParser.py +++ b/Biskit/AmberCrdParser.py @@ -2,7 +2,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/AmberEntropist.py b/Biskit/AmberEntropist.py index 92bb37e..bbf19a4 100644 --- a/Biskit/AmberEntropist.py +++ b/Biskit/AmberEntropist.py @@ -2,7 +2,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/AmberEntropyMaster.py b/Biskit/AmberEntropyMaster.py index 669f0f1..b0265f6 100644 --- a/Biskit/AmberEntropyMaster.py +++ b/Biskit/AmberEntropyMaster.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/AmberEntropySlave.py b/Biskit/AmberEntropySlave.py index ba5cabd..c80583b 100644 --- a/Biskit/AmberEntropySlave.py +++ b/Biskit/AmberEntropySlave.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/AmberParmBuilder.py b/Biskit/AmberParmBuilder.py index 40bba27..fe5e87a 100644 --- a/Biskit/AmberParmBuilder.py +++ b/Biskit/AmberParmBuilder.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/AmberRstParser.py b/Biskit/AmberRstParser.py index 8b157c2..567347d 100644 --- a/Biskit/AmberRstParser.py +++ b/Biskit/AmberRstParser.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/BioUnit.py b/Biskit/BioUnit.py index 9d11405..62b1e68 100644 --- a/Biskit/BioUnit.py +++ b/Biskit/BioUnit.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/BisList.py b/Biskit/BisList.py index ef6364f..ebd2f00 100644 --- a/Biskit/BisList.py +++ b/Biskit/BisList.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Blast2Seq.py b/Biskit/Blast2Seq.py index 29a96a5..5f2f04f 100644 --- a/Biskit/Blast2Seq.py +++ b/Biskit/Blast2Seq.py @@ -1,7 +1,7 @@ #!/usr/bin/python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ColorSpectrum.py b/Biskit/ColorSpectrum.py index 6da9d65..de1586b 100644 --- a/Biskit/ColorSpectrum.py +++ b/Biskit/ColorSpectrum.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/CommandLine.py b/Biskit/CommandLine.py index a23d4f8..49ee8b5 100644 --- a/Biskit/CommandLine.py +++ b/Biskit/CommandLine.py @@ -1,5 +1,5 @@ ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/DSSP.py b/Biskit/DSSP.py index 1be71f8..483ff3c 100644 --- a/Biskit/DSSP.py +++ b/Biskit/DSSP.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/DictList.py b/Biskit/DictList.py index bb4ec5d..df18892 100644 --- a/Biskit/DictList.py +++ b/Biskit/DictList.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/Analyzer.py b/Biskit/Dock/Analyzer.py index ba39810..92381cc 100644 --- a/Biskit/Dock/Analyzer.py +++ b/Biskit/Dock/Analyzer.py @@ -4,7 +4,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/Complex.py b/Biskit/Dock/Complex.py index 01f86d1..81adc96 100644 --- a/Biskit/Dock/Complex.py +++ b/Biskit/Dock/Complex.py @@ -1,7 +1,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ComplexEvolving.py b/Biskit/Dock/ComplexEvolving.py index 32fd6b5..97b2af8 100644 --- a/Biskit/Dock/ComplexEvolving.py +++ b/Biskit/Dock/ComplexEvolving.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ComplexEvolvingList.py b/Biskit/Dock/ComplexEvolvingList.py index 06d700a..15f2875 100644 --- a/Biskit/Dock/ComplexEvolvingList.py +++ b/Biskit/Dock/ComplexEvolvingList.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ComplexList.py b/Biskit/Dock/ComplexList.py index c7aaef3..84dac52 100644 --- a/Biskit/Dock/ComplexList.py +++ b/Biskit/Dock/ComplexList.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ComplexModelRegistry.py b/Biskit/Dock/ComplexModelRegistry.py index c49529a..06c7f99 100644 --- a/Biskit/Dock/ComplexModelRegistry.py +++ b/Biskit/Dock/ComplexModelRegistry.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ComplexRandomizer.py b/Biskit/Dock/ComplexRandomizer.py index 310744c..52379ff 100644 --- a/Biskit/Dock/ComplexRandomizer.py +++ b/Biskit/Dock/ComplexRandomizer.py @@ -4,7 +4,7 @@ ## generate random orientations of receptor and ligand ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ComplexTraj.py b/Biskit/Dock/ComplexTraj.py index 4966d49..30ab7a5 100644 --- a/Biskit/Dock/ComplexTraj.py +++ b/Biskit/Dock/ComplexTraj.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ContactMaster.py b/Biskit/Dock/ContactMaster.py index f1fef1b..eb5d957 100644 --- a/Biskit/Dock/ContactMaster.py +++ b/Biskit/Dock/ContactMaster.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/ContactSlave.py b/Biskit/Dock/ContactSlave.py index 175a14c..ddd0a9b 100644 --- a/Biskit/Dock/ContactSlave.py +++ b/Biskit/Dock/ContactSlave.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/Docker.py b/Biskit/Dock/Docker.py index 1264739..52e39cb 100644 --- a/Biskit/Dock/Docker.py +++ b/Biskit/Dock/Docker.py @@ -4,7 +4,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/FixedList.py b/Biskit/Dock/FixedList.py index 003fc1e..0bc2afd 100644 --- a/Biskit/Dock/FixedList.py +++ b/Biskit/Dock/FixedList.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/HexParser.py b/Biskit/Dock/HexParser.py index 5eefd9b..bf88934 100644 --- a/Biskit/Dock/HexParser.py +++ b/Biskit/Dock/HexParser.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/Intervor.py b/Biskit/Dock/Intervor.py index 848d1a8..6bf7a46 100644 --- a/Biskit/Dock/Intervor.py +++ b/Biskit/Dock/Intervor.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/XRefineComplex.py b/Biskit/Dock/XRefineComplex.py index e266810..5c57e9f 100644 --- a/Biskit/Dock/XRefineComplex.py +++ b/Biskit/Dock/XRefineComplex.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/__init__.py b/Biskit/Dock/__init__.py index 6610719..aa70922 100644 --- a/Biskit/Dock/__init__.py +++ b/Biskit/Dock/__init__.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/delphiBindingEnergy.py b/Biskit/Dock/delphiBindingEnergy.py index df4aeba..dfa79ae 100644 --- a/Biskit/Dock/delphiBindingEnergy.py +++ b/Biskit/Dock/delphiBindingEnergy.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/hexTools.py b/Biskit/Dock/hexTools.py index 286ecf7..eecf65c 100644 --- a/Biskit/Dock/hexTools.py +++ b/Biskit/Dock/hexTools.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Dock/settings.py b/Biskit/Dock/settings.py index f0ea17b..532d10d 100644 --- a/Biskit/Dock/settings.py +++ b/Biskit/Dock/settings.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/EnsembleTraj.py b/Biskit/EnsembleTraj.py index e81ad96..1975368 100644 --- a/Biskit/EnsembleTraj.py +++ b/Biskit/EnsembleTraj.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ErrorHandler.py b/Biskit/ErrorHandler.py index 3d24a6b..8b7a28a 100644 --- a/Biskit/ErrorHandler.py +++ b/Biskit/ErrorHandler.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Errors.py b/Biskit/Errors.py index b655a63..ef27c3f 100644 --- a/Biskit/Errors.py +++ b/Biskit/Errors.py @@ -1,7 +1,7 @@ ## Errors for all modules ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ExeConfig.py b/Biskit/ExeConfig.py index 2bafae6..0d5a81e 100644 --- a/Biskit/ExeConfig.py +++ b/Biskit/ExeConfig.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ExeConfigCache.py b/Biskit/ExeConfigCache.py index 5671fb8..6a683e7 100644 --- a/Biskit/ExeConfigCache.py +++ b/Biskit/ExeConfigCache.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Executor.py b/Biskit/Executor.py index 4e66843..630e8c0 100644 --- a/Biskit/Executor.py +++ b/Biskit/Executor.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Fold_X.py b/Biskit/Fold_X.py index 12e20d1..d4d75d6 100644 --- a/Biskit/Fold_X.py +++ b/Biskit/Fold_X.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Hmmer.py b/Biskit/Hmmer.py index a5b0714..7ed8b8e 100644 --- a/Biskit/Hmmer.py +++ b/Biskit/Hmmer.py @@ -4,7 +4,7 @@ ## Class conservation ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/IcmCad.py b/Biskit/IcmCad.py index 99fdfdd..e312e4c 100644 --- a/Biskit/IcmCad.py +++ b/Biskit/IcmCad.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/LocalPath.py b/Biskit/LocalPath.py index 7b0fc51..8d787d9 100644 --- a/Biskit/LocalPath.py +++ b/Biskit/LocalPath.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/LogFile.py b/Biskit/LogFile.py index 2c5e517..50a6622 100644 --- a/Biskit/LogFile.py +++ b/Biskit/LogFile.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/MatrixPlot.py b/Biskit/MatrixPlot.py index 147f2f8..138ba64 100644 --- a/Biskit/MatrixPlot.py +++ b/Biskit/MatrixPlot.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Wolfgang Rieping +## Copyright (C) 2004-2016 Wolfgang Rieping ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/Aligner.py b/Biskit/Mod/Aligner.py index a98f9bd..31669ff 100644 --- a/Biskit/Mod/Aligner.py +++ b/Biskit/Mod/Aligner.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/AlignerMaster.py b/Biskit/Mod/AlignerMaster.py index d301fcb..91ee54a 100644 --- a/Biskit/Mod/AlignerMaster.py +++ b/Biskit/Mod/AlignerMaster.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/AlignerSlave.py b/Biskit/Mod/AlignerSlave.py index 15df0aa..c66637e 100644 --- a/Biskit/Mod/AlignerSlave.py +++ b/Biskit/Mod/AlignerSlave.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/Analyse.py b/Biskit/Mod/Analyse.py index dfe459e..67efd17 100644 --- a/Biskit/Mod/Analyse.py +++ b/Biskit/Mod/Analyse.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/Benchmark.py b/Biskit/Mod/Benchmark.py index 9658d9e..91b26ea 100644 --- a/Biskit/Mod/Benchmark.py +++ b/Biskit/Mod/Benchmark.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/CheckIdentities.py b/Biskit/Mod/CheckIdentities.py index 6a827e5..e2f0982 100644 --- a/Biskit/Mod/CheckIdentities.py +++ b/Biskit/Mod/CheckIdentities.py @@ -1,7 +1,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/ModelMaster.py b/Biskit/Mod/ModelMaster.py index 348e274..56dbad4 100644 --- a/Biskit/Mod/ModelMaster.py +++ b/Biskit/Mod/ModelMaster.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/ModelSlave.py b/Biskit/Mod/ModelSlave.py index 713164d..f818390 100644 --- a/Biskit/Mod/ModelSlave.py +++ b/Biskit/Mod/ModelSlave.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/Modeller.py b/Biskit/Mod/Modeller.py index 68aa729..38f4b20 100644 --- a/Biskit/Mod/Modeller.py +++ b/Biskit/Mod/Modeller.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/TemplateCleaner.py b/Biskit/Mod/TemplateCleaner.py index 463588a..37cdec1 100644 --- a/Biskit/Mod/TemplateCleaner.py +++ b/Biskit/Mod/TemplateCleaner.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/TemplateFilter.py b/Biskit/Mod/TemplateFilter.py index d663d7a..28e9f7d 100644 --- a/Biskit/Mod/TemplateFilter.py +++ b/Biskit/Mod/TemplateFilter.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/TemplateSearcher.py b/Biskit/Mod/TemplateSearcher.py index 743ba0a..e553d69 100644 --- a/Biskit/Mod/TemplateSearcher.py +++ b/Biskit/Mod/TemplateSearcher.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/ValidationSetup.py b/Biskit/Mod/ValidationSetup.py index 12b2671..0539a97 100644 --- a/Biskit/Mod/ValidationSetup.py +++ b/Biskit/Mod/ValidationSetup.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/__init__.py b/Biskit/Mod/__init__.py index cdeed5c..c9794c3 100644 --- a/Biskit/Mod/__init__.py +++ b/Biskit/Mod/__init__.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/modUtils.py b/Biskit/Mod/modUtils.py index 72f72b8..844c5f9 100644 --- a/Biskit/Mod/modUtils.py +++ b/Biskit/Mod/modUtils.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Mod/settings.py b/Biskit/Mod/settings.py index 19a67de..37ce397 100644 --- a/Biskit/Mod/settings.py +++ b/Biskit/Mod/settings.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Model.py b/Biskit/Model.py index 3741bd3..9c29106 100644 --- a/Biskit/Model.py +++ b/Biskit/Model.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ModelList.py b/Biskit/ModelList.py index 77e0fdc..4e1ce0f 100644 --- a/Biskit/ModelList.py +++ b/Biskit/ModelList.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PCRModel.py b/Biskit/PCRModel.py index dfc944e..2a7256a 100644 --- a/Biskit/PCRModel.py +++ b/Biskit/PCRModel.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBCleaner.py b/Biskit/PDBCleaner.py index 0b1c2a8..d3526cb 100644 --- a/Biskit/PDBCleaner.py +++ b/Biskit/PDBCleaner.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBDope.py b/Biskit/PDBDope.py index 86d58d4..e58cafc 100644 --- a/Biskit/PDBDope.py +++ b/Biskit/PDBDope.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBModel.py b/Biskit/PDBModel.py index 9aa31cd..28bfe85 100644 --- a/Biskit/PDBModel.py +++ b/Biskit/PDBModel.py @@ -1,7 +1,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBParseFile.py b/Biskit/PDBParseFile.py index 353574f..8f6e806 100644 --- a/Biskit/PDBParseFile.py +++ b/Biskit/PDBParseFile.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBParseModel.py b/Biskit/PDBParseModel.py index 67d23ec..f9e13ea 100644 --- a/Biskit/PDBParseModel.py +++ b/Biskit/PDBParseModel.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBParseNCBI.py b/Biskit/PDBParseNCBI.py index 2549525..190851e 100644 --- a/Biskit/PDBParseNCBI.py +++ b/Biskit/PDBParseNCBI.py @@ -2,7 +2,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBParsePickle.py b/Biskit/PDBParsePickle.py index 19cd9ad..0ca6982 100644 --- a/Biskit/PDBParsePickle.py +++ b/Biskit/PDBParsePickle.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBParser.py b/Biskit/PDBParser.py index 1f04044..52849b8 100644 --- a/Biskit/PDBParser.py +++ b/Biskit/PDBParser.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PDBParserFactory.py b/Biskit/PDBParserFactory.py index a9de522..3fd45c8 100644 --- a/Biskit/PDBParserFactory.py +++ b/Biskit/PDBParserFactory.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PVM/ExampleMaster.py b/Biskit/PVM/ExampleMaster.py index 8124a68..44fc500 100644 --- a/Biskit/PVM/ExampleMaster.py +++ b/Biskit/PVM/ExampleMaster.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PVM/ExampleSlave.py b/Biskit/PVM/ExampleSlave.py index cecc394..f6479a6 100644 --- a/Biskit/PVM/ExampleSlave.py +++ b/Biskit/PVM/ExampleSlave.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PVM/Status.py b/Biskit/PVM/Status.py index 15085f9..b704dee 100644 --- a/Biskit/PVM/Status.py +++ b/Biskit/PVM/Status.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PVM/TrackingJobMaster.py b/Biskit/PVM/TrackingJobMaster.py index 297c17c..8188f97 100644 --- a/Biskit/PVM/TrackingJobMaster.py +++ b/Biskit/PVM/TrackingJobMaster.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PVM/__init__.py b/Biskit/PVM/__init__.py index 4825502..6fe58bb 100644 --- a/Biskit/PVM/__init__.py +++ b/Biskit/PVM/__init__.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/PVM/pvm.py b/Biskit/PVM/pvm.py index 1d47475..d22a35d 100644 --- a/Biskit/PVM/pvm.py +++ b/Biskit/PVM/pvm.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Polymer.py b/Biskit/Polymer.py index 83caf84..2b983fb 100644 --- a/Biskit/Polymer.py +++ b/Biskit/Polymer.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ProfileCollection.py b/Biskit/ProfileCollection.py index b2dd396..32c3d9a 100644 --- a/Biskit/ProfileCollection.py +++ b/Biskit/ProfileCollection.py @@ -2,7 +2,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ProfileMirror.py b/Biskit/ProfileMirror.py index 6368a00..55ab982 100644 --- a/Biskit/ProfileMirror.py +++ b/Biskit/ProfileMirror.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Prosa2003.py b/Biskit/Prosa2003.py index 75a118d..32281d5 100644 --- a/Biskit/Prosa2003.py +++ b/Biskit/Prosa2003.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Pymoler.py b/Biskit/Pymoler.py index 07f6326..8f48e97 100644 --- a/Biskit/Pymoler.py +++ b/Biskit/Pymoler.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/QualMaster.py b/Biskit/QualMaster.py index 1ea0f98..3f68439 100644 --- a/Biskit/QualMaster.py +++ b/Biskit/QualMaster.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/QualSlave.py b/Biskit/QualSlave.py index bafeff6..37ca96a 100644 --- a/Biskit/QualSlave.py +++ b/Biskit/QualSlave.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Ramachandran.py b/Biskit/Ramachandran.py index 50f9d19..eda05a2 100644 --- a/Biskit/Ramachandran.py +++ b/Biskit/Ramachandran.py @@ -1,7 +1,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/ReduceCoordinates.py b/Biskit/ReduceCoordinates.py index 03b2273..0e626ba 100644 --- a/Biskit/ReduceCoordinates.py +++ b/Biskit/ReduceCoordinates.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/SettingsManager.py b/Biskit/SettingsManager.py index b90b3b0..5b46b98 100644 --- a/Biskit/SettingsManager.py +++ b/Biskit/SettingsManager.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/SettingsParser.py b/Biskit/SettingsParser.py index e822e9d..de4cb64 100644 --- a/Biskit/SettingsParser.py +++ b/Biskit/SettingsParser.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/SparseArray.py b/Biskit/SparseArray.py index 3e1eb9f..d9ff88e 100644 --- a/Biskit/SparseArray.py +++ b/Biskit/SparseArray.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/StructureMaster.py b/Biskit/StructureMaster.py index a529ac5..8b07564 100644 --- a/Biskit/StructureMaster.py +++ b/Biskit/StructureMaster.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/StructureSlave.py b/Biskit/StructureSlave.py index 515a7bb..5de9fed 100644 --- a/Biskit/StructureSlave.py +++ b/Biskit/StructureSlave.py @@ -1,7 +1,7 @@ ## Convert PDB files to a pickled PDBModel object. ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/SurfaceRacer.py b/Biskit/SurfaceRacer.py index 3fc5327..d67e107 100644 --- a/Biskit/SurfaceRacer.py +++ b/Biskit/SurfaceRacer.py @@ -1,7 +1,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/TrajCluster.py b/Biskit/TrajCluster.py index 4e0d58a..f78c03f 100644 --- a/Biskit/TrajCluster.py +++ b/Biskit/TrajCluster.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/TrajFlexMaster.py b/Biskit/TrajFlexMaster.py index 67e4358..45794a1 100644 --- a/Biskit/TrajFlexMaster.py +++ b/Biskit/TrajFlexMaster.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/TrajFlexSlave.py b/Biskit/TrajFlexSlave.py index 1e2ccb0..359ef1c 100644 --- a/Biskit/TrajFlexSlave.py +++ b/Biskit/TrajFlexSlave.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Trajectory.py b/Biskit/Trajectory.py index 3b18da6..b1a9167 100644 --- a/Biskit/Trajectory.py +++ b/Biskit/Trajectory.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/WhatIf.py b/Biskit/WhatIf.py index 8e19c5e..af2a9be 100644 --- a/Biskit/WhatIf.py +++ b/Biskit/WhatIf.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/XplorInput.py b/Biskit/XplorInput.py index 762177a..70f4208 100644 --- a/Biskit/XplorInput.py +++ b/Biskit/XplorInput.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/Xplorer.py b/Biskit/Xplorer.py index e04d71f..5e34846 100644 --- a/Biskit/Xplorer.py +++ b/Biskit/Xplorer.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/amberResidueLibrary.py b/Biskit/amberResidueLibrary.py index 755210d..f77b36f 100644 --- a/Biskit/amberResidueLibrary.py +++ b/Biskit/amberResidueLibrary.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/amberResidues.py b/Biskit/amberResidues.py index 597e8d7..237d481 100644 --- a/Biskit/amberResidues.py +++ b/Biskit/amberResidues.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/atomCharger.py b/Biskit/atomCharger.py index f85378d..08c0613 100644 --- a/Biskit/atomCharger.py +++ b/Biskit/atomCharger.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/decorators.py b/Biskit/decorators.py index d6886fe..46f4d79 100644 --- a/Biskit/decorators.py +++ b/Biskit/decorators.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/delphi.py b/Biskit/delphi.py index e85216e..f939b9d 100644 --- a/Biskit/delphi.py +++ b/Biskit/delphi.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/deprecated/ChainCleaner.py b/Biskit/deprecated/ChainCleaner.py index a583ef2..c0728cf 100644 --- a/Biskit/deprecated/ChainCleaner.py +++ b/Biskit/deprecated/ChainCleaner.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/deprecated/ChainSeparator.py b/Biskit/deprecated/ChainSeparator.py index 09ecd93..e2ce24f 100644 --- a/Biskit/deprecated/ChainSeparator.py +++ b/Biskit/deprecated/ChainSeparator.py @@ -4,7 +4,7 @@ ## class ChainSeperator: ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/deprecated/ChainWriter.py b/Biskit/deprecated/ChainWriter.py index 64a8f51..8540d44 100644 --- a/Biskit/deprecated/ChainWriter.py +++ b/Biskit/deprecated/ChainWriter.py @@ -1,7 +1,7 @@ ## ChainWriter: ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/hist.py b/Biskit/hist.py index 8529154..8047ca6 100644 --- a/Biskit/hist.py +++ b/Biskit/hist.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Wolfgang Rieping +## Copyright (C) 2004-2016 Wolfgang Rieping ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/match2seq.py b/Biskit/match2seq.py index d9d3dd1..bbb1515 100644 --- a/Biskit/match2seq.py +++ b/Biskit/match2seq.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/mathUtils.py b/Biskit/mathUtils.py index 24010b2..03b4d99 100644 --- a/Biskit/mathUtils.py +++ b/Biskit/mathUtils.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/molTools.py b/Biskit/molTools.py index 8dc23bc..c346220 100644 --- a/Biskit/molTools.py +++ b/Biskit/molTools.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/molUtils.py b/Biskit/molUtils.py index 2de55e2..ec1ba61 100644 --- a/Biskit/molUtils.py +++ b/Biskit/molUtils.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/msms.py b/Biskit/msms.py index 490040a..a4e1e35 100644 --- a/Biskit/msms.py +++ b/Biskit/msms.py @@ -4,7 +4,7 @@ ## Class msms ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/plotUtils.py b/Biskit/plotUtils.py index 42a243c..3e43ecd 100644 --- a/Biskit/plotUtils.py +++ b/Biskit/plotUtils.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/reduce.py b/Biskit/reduce.py index 654d948..7e2c7db 100644 --- a/Biskit/reduce.py +++ b/Biskit/reduce.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/residue.py b/Biskit/residue.py index 4ff40b9..bf03876 100644 --- a/Biskit/residue.py +++ b/Biskit/residue.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/settings.py b/Biskit/settings.py index 4874873..66e3d5a 100644 --- a/Biskit/settings.py +++ b/Biskit/settings.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/surfaceRacerTools.py b/Biskit/surfaceRacerTools.py index 175a75d..572e0e1 100644 --- a/Biskit/surfaceRacerTools.py +++ b/Biskit/surfaceRacerTools.py @@ -3,7 +3,7 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/test.py b/Biskit/test.py index 16f1462..2668e31 100644 --- a/Biskit/test.py +++ b/Biskit/test.py @@ -1,6 +1,6 @@ #!/usr/bin/env python ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/Biskit/tmalign.py b/Biskit/tmalign.py index 847a4bd..af6a1f5 100644 --- a/Biskit/tmalign.py +++ b/Biskit/tmalign.py @@ -1,6 +1,6 @@ ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/1pdb2model.py b/scripts/Biskit/1pdb2model.py index 3794081..7cd5fb6 100644 --- a/scripts/Biskit/1pdb2model.py +++ b/scripts/Biskit/1pdb2model.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/am_restartMD.py b/scripts/Biskit/am_restartMD.py index 2aec91b..ab15e26 100644 --- a/scripts/Biskit/am_restartMD.py +++ b/scripts/Biskit/am_restartMD.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/amber2traj.py b/scripts/Biskit/amber2traj.py index 3e8ec65..452e1fc 100644 --- a/scripts/Biskit/amber2traj.py +++ b/scripts/Biskit/amber2traj.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/amberConcat.py b/scripts/Biskit/amberConcat.py index 9980930..bfa0b6b 100644 --- a/scripts/Biskit/amberConcat.py +++ b/scripts/Biskit/amberConcat.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/amber_ensembleMD.py b/scripts/Biskit/amber_ensembleMD.py index da14d37..3fc57a5 100644 --- a/scripts/Biskit/amber_ensembleMD.py +++ b/scripts/Biskit/amber_ensembleMD.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/amber_pdb2parm.py b/scripts/Biskit/amber_pdb2parm.py index 9d9fc9b..cd6a0d3 100644 --- a/scripts/Biskit/amber_pdb2parm.py +++ b/scripts/Biskit/amber_pdb2parm.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/averageASA.py b/scripts/Biskit/averageASA.py index 8e7bdf8..b457904 100644 --- a/scripts/Biskit/averageASA.py +++ b/scripts/Biskit/averageASA.py @@ -2,7 +2,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/castPdbs.py b/scripts/Biskit/castPdbs.py index 300cdf2..02c4dff 100644 --- a/scripts/Biskit/castPdbs.py +++ b/scripts/Biskit/castPdbs.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/cvsrm.py b/scripts/Biskit/cvsrm.py index 4f0ffe7..f8f78b7 100644 --- a/scripts/Biskit/cvsrm.py +++ b/scripts/Biskit/cvsrm.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/dope.py b/scripts/Biskit/dope.py index bb40520..ac78545 100644 --- a/scripts/Biskit/dope.py +++ b/scripts/Biskit/dope.py @@ -2,7 +2,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/echoTestRoot.py b/scripts/Biskit/echoTestRoot.py index a9197f1..709bb40 100644 --- a/scripts/Biskit/echoTestRoot.py +++ b/scripts/Biskit/echoTestRoot.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/fix_array_constructor.py b/scripts/Biskit/fix_array_constructor.py index cb3b7e2..dbc066a 100644 --- a/scripts/Biskit/fix_array_constructor.py +++ b/scripts/Biskit/fix_array_constructor.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/getSS.py b/scripts/Biskit/getSS.py index 7ece728..1557a6b 100644 --- a/scripts/Biskit/getSS.py +++ b/scripts/Biskit/getSS.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/killpp.py b/scripts/Biskit/killpp.py index dfdb909..58fc4a5 100644 --- a/scripts/Biskit/killpp.py +++ b/scripts/Biskit/killpp.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/model2pdb.py b/scripts/Biskit/model2pdb.py index b3aff5a..b6a5aee 100644 --- a/scripts/Biskit/model2pdb.py +++ b/scripts/Biskit/model2pdb.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/pcr_crd2pdb.py b/scripts/Biskit/pcr_crd2pdb.py index 33eae90..cf74aa9 100644 --- a/scripts/Biskit/pcr_crd2pdb.py +++ b/scripts/Biskit/pcr_crd2pdb.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/pdb2model.py b/scripts/Biskit/pdb2model.py index 03b7440..41fb0fb 100644 --- a/scripts/Biskit/pdb2model.py +++ b/scripts/Biskit/pdb2model.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/pdb2seq.py b/scripts/Biskit/pdb2seq.py index ba2a1b7..85853f0 100644 --- a/scripts/Biskit/pdb2seq.py +++ b/scripts/Biskit/pdb2seq.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/pdb2traj.py b/scripts/Biskit/pdb2traj.py index 88794c5..b0bfc7e 100644 --- a/scripts/Biskit/pdb2traj.py +++ b/scripts/Biskit/pdb2traj.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/reduceTraj.py b/scripts/Biskit/reduceTraj.py index 21d5886..7ee448f 100644 --- a/scripts/Biskit/reduceTraj.py +++ b/scripts/Biskit/reduceTraj.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/redump.py b/scripts/Biskit/redump.py index 1f86434..46324ef 100644 --- a/scripts/Biskit/redump.py +++ b/scripts/Biskit/redump.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/relocalize.py b/scripts/Biskit/relocalize.py index 24f0d46..fd0ba37 100644 --- a/scripts/Biskit/relocalize.py +++ b/scripts/Biskit/relocalize.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/replace_wildcard_import.py b/scripts/Biskit/replace_wildcard_import.py index 90a9372..b0fc6ff 100644 --- a/scripts/Biskit/replace_wildcard_import.py +++ b/scripts/Biskit/replace_wildcard_import.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/restartPVM.py b/scripts/Biskit/restartPVM.py index d3b2f55..fa0e271 100644 --- a/scripts/Biskit/restartPVM.py +++ b/scripts/Biskit/restartPVM.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/rm_pvm.py b/scripts/Biskit/rm_pvm.py index b235627..e6c8179 100644 --- a/scripts/Biskit/rm_pvm.py +++ b/scripts/Biskit/rm_pvm.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/runPcr.py b/scripts/Biskit/runPcr.py index af99ab3..f40bca7 100644 --- a/scripts/Biskit/runPcr.py +++ b/scripts/Biskit/runPcr.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/thinTraj.py b/scripts/Biskit/thinTraj.py index 0670d33..7651d5e 100644 --- a/scripts/Biskit/thinTraj.py +++ b/scripts/Biskit/thinTraj.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/traj2ensemble.py b/scripts/Biskit/traj2ensemble.py index 916d3a3..dffeed3 100644 --- a/scripts/Biskit/traj2ensemble.py +++ b/scripts/Biskit/traj2ensemble.py @@ -2,7 +2,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/trajAddNames.py b/scripts/Biskit/trajAddNames.py index c62b217..0fadfbc 100644 --- a/scripts/Biskit/trajAddNames.py +++ b/scripts/Biskit/trajAddNames.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/trajFluct.py b/scripts/Biskit/trajFluct.py index 82e32ef..de0dd76 100644 --- a/scripts/Biskit/trajFluct.py +++ b/scripts/Biskit/trajFluct.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/trajpool2ensemble.py b/scripts/Biskit/trajpool2ensemble.py index 90fc7ff..75de970 100644 --- a/scripts/Biskit/trajpool2ensemble.py +++ b/scripts/Biskit/trajpool2ensemble.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Biskit/xload.py b/scripts/Biskit/xload.py index 2d4ef30..ed75ea1 100644 --- a/scripts/Biskit/xload.py +++ b/scripts/Biskit/xload.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/PCR2hex.py b/scripts/Dock/PCR2hex.py index b2b8309..a320f50 100644 --- a/scripts/Dock/PCR2hex.py +++ b/scripts/Dock/PCR2hex.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/concat_complexLists.py b/scripts/Dock/concat_complexLists.py index 9015cab..96fedae 100644 --- a/scripts/Dock/concat_complexLists.py +++ b/scripts/Dock/concat_complexLists.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/contacter.py b/scripts/Dock/contacter.py index 116a7ac..351232b 100644 --- a/scripts/Dock/contacter.py +++ b/scripts/Dock/contacter.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/delphiBinding.py b/scripts/Dock/delphiBinding.py index 2aff740..e92b730 100644 --- a/scripts/Dock/delphiBinding.py +++ b/scripts/Dock/delphiBinding.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg +## Copyright (C) 2004-2016 Raik Gruenberg ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/hex2complex.py b/scripts/Dock/hex2complex.py index 29d8572..447716c 100644 --- a/scripts/Dock/hex2complex.py +++ b/scripts/Dock/hex2complex.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/hexInput.py b/scripts/Dock/hexInput.py index 74b09bc..67e7466 100644 --- a/scripts/Dock/hexInput.py +++ b/scripts/Dock/hexInput.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/hexResults.py b/scripts/Dock/hexResults.py index ae7c9da..7b69bc4 100644 --- a/scripts/Dock/hexResults.py +++ b/scripts/Dock/hexResults.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/inspectComplexList.py b/scripts/Dock/inspectComplexList.py index ec0686a..a5bc54b 100644 --- a/scripts/Dock/inspectComplexList.py +++ b/scripts/Dock/inspectComplexList.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/multidock.py b/scripts/Dock/multidock.py index eea2dd3..0a12f1e 100644 --- a/scripts/Dock/multidock.py +++ b/scripts/Dock/multidock.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/pdb2complex.py b/scripts/Dock/pdb2complex.py index 062d8f8..23f16fd 100644 --- a/scripts/Dock/pdb2complex.py +++ b/scripts/Dock/pdb2complex.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/reduceComplexList.py b/scripts/Dock/reduceComplexList.py index 4a63d30..ab26f7c 100644 --- a/scripts/Dock/reduceComplexList.py +++ b/scripts/Dock/reduceComplexList.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Dock/selectModels.py b/scripts/Dock/selectModels.py index 0801229..da03e72 100644 --- a/scripts/Dock/selectModels.py +++ b/scripts/Dock/selectModels.py @@ -2,7 +2,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/align.py b/scripts/Mod/align.py index ffc9b93..b90dac7 100644 --- a/scripts/Mod/align.py +++ b/scripts/Mod/align.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/align_parallel.py b/scripts/Mod/align_parallel.py index 38f7dff..db875e1 100644 --- a/scripts/Mod/align_parallel.py +++ b/scripts/Mod/align_parallel.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/analyse.py b/scripts/Mod/analyse.py index 5959ed5..32abf3d 100644 --- a/scripts/Mod/analyse.py +++ b/scripts/Mod/analyse.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/benchmark.py b/scripts/Mod/benchmark.py index 0b70e3b..8edaca2 100644 --- a/scripts/Mod/benchmark.py +++ b/scripts/Mod/benchmark.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/clean_templates.py b/scripts/Mod/clean_templates.py index dc0e109..98f6b34 100644 --- a/scripts/Mod/clean_templates.py +++ b/scripts/Mod/clean_templates.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/model.py b/scripts/Mod/model.py index 5a056ac..d100567 100644 --- a/scripts/Mod/model.py +++ b/scripts/Mod/model.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/model_for_docking.py b/scripts/Mod/model_for_docking.py index 9d8b325..1f0ddd6 100644 --- a/scripts/Mod/model_for_docking.py +++ b/scripts/Mod/model_for_docking.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/model_parallel.py b/scripts/Mod/model_parallel.py index 7b3c588..c1afda3 100644 --- a/scripts/Mod/model_parallel.py +++ b/scripts/Mod/model_parallel.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/modelling_example.py b/scripts/Mod/modelling_example.py index 1c71734..645fcac 100644 --- a/scripts/Mod/modelling_example.py +++ b/scripts/Mod/modelling_example.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/search_sequences.py b/scripts/Mod/search_sequences.py index 75090eb..9964714 100644 --- a/scripts/Mod/search_sequences.py +++ b/scripts/Mod/search_sequences.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/search_templates.py b/scripts/Mod/search_templates.py index 498442c..9356bad 100644 --- a/scripts/Mod/search_templates.py +++ b/scripts/Mod/search_templates.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/Mod/setup_validation.py b/scripts/Mod/setup_validation.py index 6198464..1194869 100644 --- a/scripts/Mod/setup_validation.py +++ b/scripts/Mod/setup_validation.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_baharEntropy.py b/scripts/analysis/a_baharEntropy.py index 0a1778a..baeb1aa 100644 --- a/scripts/analysis/a_baharEntropy.py +++ b/scripts/analysis/a_baharEntropy.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_baharFluct.py b/scripts/analysis/a_baharFluct.py index 5904dc1..d611d59 100644 --- a/scripts/analysis/a_baharFluct.py +++ b/scripts/analysis/a_baharFluct.py @@ -1,7 +1,7 @@ from a_baharEntropy import * ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_cad.py b/scripts/analysis/a_cad.py index b4fa440..c18943c 100644 --- a/scripts/analysis/a_cad.py +++ b/scripts/analysis/a_cad.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_comEntropy.py b/scripts/analysis/a_comEntropy.py index 268c5c3..c316c15 100644 --- a/scripts/analysis/a_comEntropy.py +++ b/scripts/analysis/a_comEntropy.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_compare_rms_vs_fnc.py b/scripts/analysis/a_compare_rms_vs_fnc.py index 95d08fd..6ad3ea2 100644 --- a/scripts/analysis/a_compare_rms_vs_fnc.py +++ b/scripts/analysis/a_compare_rms_vs_fnc.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_dasa.py b/scripts/analysis/a_dasa.py index c3d8305..448f93b 100644 --- a/scripts/analysis/a_dasa.py +++ b/scripts/analysis/a_dasa.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_ensemble.py b/scripts/analysis/a_ensemble.py index 0214ce8..4c5bdb1 100644 --- a/scripts/analysis/a_ensemble.py +++ b/scripts/analysis/a_ensemble.py @@ -3,7 +3,7 @@ ## -*- coding: iso-8859-1 -*- ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_foldX.py b/scripts/analysis/a_foldX.py index 0638576..956fa4e 100644 --- a/scripts/analysis/a_foldX.py +++ b/scripts/analysis/a_foldX.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_model_rms.py b/scripts/analysis/a_model_rms.py index 4dffbaa..6cd8b86 100644 --- a/scripts/analysis/a_model_rms.py +++ b/scripts/analysis/a_model_rms.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_multiDock.py b/scripts/analysis/a_multiDock.py index 63747a8..054c9a2 100644 --- a/scripts/analysis/a_multiDock.py +++ b/scripts/analysis/a_multiDock.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_multidock_contour.py b/scripts/analysis/a_multidock_contour.py index b7c6606..231b130 100644 --- a/scripts/analysis/a_multidock_contour.py +++ b/scripts/analysis/a_multidock_contour.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_random_contacting.py b/scripts/analysis/a_random_contacting.py index ef55dd3..736ddd8 100644 --- a/scripts/analysis/a_random_contacting.py +++ b/scripts/analysis/a_random_contacting.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_report_comEntropy.py b/scripts/analysis/a_report_comEntropy.py index 756ea58..3144ea0 100644 --- a/scripts/analysis/a_report_comEntropy.py +++ b/scripts/analysis/a_report_comEntropy.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_rmsd_vs_dock_performance.py b/scripts/analysis/a_rmsd_vs_dock_performance.py index 4be89c1..c9eeecc 100644 --- a/scripts/analysis/a_rmsd_vs_dock_performance.py +++ b/scripts/analysis/a_rmsd_vs_dock_performance.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_rmsd_vs_performance.py b/scripts/analysis/a_rmsd_vs_performance.py index ef8ce2a..55e4bbe 100644 --- a/scripts/analysis/a_rmsd_vs_performance.py +++ b/scripts/analysis/a_rmsd_vs_performance.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_table_fnac_rms_score.py b/scripts/analysis/a_table_fnac_rms_score.py index 001e040..45e4abe 100644 --- a/scripts/analysis/a_table_fnac_rms_score.py +++ b/scripts/analysis/a_table_fnac_rms_score.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_trajEntropy.py b/scripts/analysis/a_trajEntropy.py index aec7c4c..55be69e 100644 --- a/scripts/analysis/a_trajEntropy.py +++ b/scripts/analysis/a_trajEntropy.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/a_trajQuality.py b/scripts/analysis/a_trajQuality.py index 2e6084f..b473f43 100644 --- a/scripts/analysis/a_trajQuality.py +++ b/scripts/analysis/a_trajQuality.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/random_complexes.py b/scripts/analysis/random_complexes.py index 891e493..80c01f9 100644 --- a/scripts/analysis/random_complexes.py +++ b/scripts/analysis/random_complexes.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/analysis/random_grouping.py b/scripts/analysis/random_grouping.py index 43516ef..e209964 100644 --- a/scripts/analysis/random_grouping.py +++ b/scripts/analysis/random_grouping.py @@ -2,7 +2,7 @@ ## numpy-oldnumeric calls replaced by custom script; 09/06/2016 ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as diff --git a/scripts/deprecated/pdb2xplor.py b/scripts/deprecated/pdb2xplor.py index 7447da0..dd6126a 100644 --- a/scripts/deprecated/pdb2xplor.py +++ b/scripts/deprecated/pdb2xplor.py @@ -1,7 +1,7 @@ #!/usr/bin/env python ## ## Biskit, a toolkit for the manipulation of macromolecular structures -## Copyright (C) 2004-2012 Raik Gruenberg & Johan Leckner +## Copyright (C) 2004-2016 Raik Gruenberg & Johan Leckner ## ## This program is free software; you can redistribute it and/or ## modify it under the terms of the GNU General Public License as