NAMESPACE

# Generated by roxygen2: do not edit by hand

export(IQM)
export(IQSD)
export(amp.del)
export(ave.segmean)
export(break.density)
export(chr.arm.cnv)
export(chr.sort)
export(chromosome.limit.coords)
export(circ.chromo.plot)
export(circ.wg.plot)
export(clean.cnv.artifact)
export(cnv.break.annot)
export(cnv.breaks)
export(cnv.freq)
export(createRandomString)
export(d3gb.chr.lim)
export(dngr)
export(freq.p.test)
export(gene.cnv)
export(gene.track.view)
export(geneBreakOverlap)
export(get.genesgr)
export(hot.spot.samples)
export(map2color)
export(match.breaks)
export(med.segmean)
export(merge2lists)
export(pct.genome.changed)
export(segment.gap)
export(shattered.eval)
export(shattered.map.plot)
export(shattered.regions)
export(shattered.regions.cnv)
export(sv.model.view)
export(svc.break.annot)
export(svc.breaks)
export(upgr)
export(validate.cnv)
export(validate.svc)
exportClasses(break.annot)
exportClasses(breaks)
exportClasses(chromo.regs)
exportClasses(cnvfreq)
exportClasses(genecnv)
exportClasses(null.freq)
exportClasses(refSeqDat)
exportClasses(svcnvio)
import(data.table,except=c("shift"))
import(GenomicRanges)
import(tidyr)
import(circlize)
import(D3GB)
import(shape)
import(org.Hs.eg.db)
import(TxDb.Hsapiens.UCSC.hg19.knownGene)
import(TxDb.Hsapiens.UCSC.hg38.knownGene)
importFrom(taRifx, remove.factors)