From f00ab89431cfec7dcaf81b32b669562a6fb97002 Mon Sep 17 00:00:00 2001 From: Pavankumar Videm Date: Thu, 16 Jan 2025 12:39:08 +0100 Subject: [PATCH] remove tl.snf as it fails with numpy >=2; we don't have a usecase for this function yet --- tools/muon/cluster_analyze_embed_muon.xml | 58 +---------------------- 1 file changed, 1 insertion(+), 57 deletions(-) diff --git a/tools/muon/cluster_analyze_embed_muon.xml b/tools/muon/cluster_analyze_embed_muon.xml index f7206d377f1..9226427a0d7 100644 --- a/tools/muon/cluster_analyze_embed_muon.xml +++ b/tools/muon/cluster_analyze_embed_muon.xml @@ -67,18 +67,6 @@ mu.tl.mofa( copy=False ) -#else if $method.method == 'tl.snf' -mu.tl.snf( - mdata, - n_neighbors=$method.n_neighbors, - @CMD_neighbor_keys@ - key_added='$method.key_added', - n_iterations=$method.n_iterations, - sigma=$method.sigma, - eps=$method.eps, - copy=False -) - #else if $method.method == 'tl.umap' mu.tl.umap( mdata, @@ -110,7 +98,6 @@ mu.tl.umap( - @@ -173,14 +160,6 @@ mu.tl.umap( - - - - - - - - @@ -383,42 +362,7 @@ mu.tl.umap( - - - - - - - -
- -
- - - - - - - - - - - - - - - - - - - - - - - -
- - +