fix: ignore_user_permissions set to 1 for parent field of tree doctypes

[RitvikSardana]

ignore_user_permission flag was unchecked in Department,Location and Quality Procedure.
So ticked it for all these 3.

Linked PR: #22235

[codecov]

Codecov Report

Merging #36869 (de433d8) into develop (6d9cebf) will increase coverage by 0.22%.
Report is 109 commits behind head on develop.
The diff coverage is 74.07%.

Additional details and impacted files

@@             Coverage Diff             @@
##           develop   #36869      +/-   ##
===========================================
+ Coverage    65.20%   65.42%   +0.22%     
===========================================
  Files          792      794       +2     
  Lines        61861    62181     +320     
===========================================
+ Hits         40334    40681     +347     
+ Misses       21527    21500      -27     

Files Changed	Coverage Δ
...ype/request_for_quotation/request_for_quotation.py	54.70% <0.00%> (ø)
.../report/procurement_tracker/procurement_tracker.py	17.18% <0.00%> (ø)
erpnext/controllers/stock_controller.py	82.52% <ø> (ø)
...stock/doctype/material_request/material_request.py	74.68% <ø> (ø)
...e/asset_value_adjustment/asset_value_adjustment.py	80.88% <62.50%> (ø)
erpnext/controllers/accounts_controller.py	86.11% <67.85%> (+<0.01%)	⬆️
...e/payment_reconciliation/payment_reconciliation.py	93.68% <75.00%> (ø)
erpnext/accounts/utils.py	73.99% <77.77%> (ø)
...preciation_schedule/asset_depreciation_schedule.py	89.42% <83.87%> (ø)
erpnext/selling/doctype/customer/customer.py	75.72% <85.71%> (-0.10%)	⬇️
... and 8 more

... and 23 files with indirect coverage changes