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references.bib
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@article{blumofe1996,
title = {Cilk: {{An}} Efficient Multithreaded Runtime System},
author = {Blumofe, Robert D. and Joerg, Christopher F. and Kuszmaul, Bradley C. and Leiserson, Charles E. and Randall, Keith H. and Zhou, Yuli},
year = {1996},
volume = {37},
pages = {55--69},
publisher = {{Elsevier}},
doi = {10.1006/jpdc.1996.0107},
journal = {Journal of Parallel and Distributed Computing},
number = {1}
}
@unpublished{floros2020,
title = {Measures of Discrepancy between Network Cluster Configurations Using Graphlet Spectrograms},
author = {Floros, Dimitris and Liu, Tiancheng and Pitsianis, Nikos P. and Sun, Xiaobai},
year = {2020},
note = {Manuscript under review},
type = {Under Review}
}
@inproceedings{floros2020a,
title = {Using Graphlet Spectrograms for Temporal Pattern Analysis of Virus-Research Collaboration Networks},
booktitle = {{{IEEE High Performance Extreme Computing Conference}}},
author = {Floros, Dimitris and Liu, Tiancheng and Pitsianis, Nikos P. and Sun, Xiaobai},
year = {2020},
}
@inproceedings{floros2020b,
title = {Fast Graphlet Transform of Sparse Graphs},
booktitle = {{{IEEE High Performance Extreme Computing Conference}}},
author = {Floros, Dimitris and Pitsianis, Nikos and Sun, Xiaobai},
year = {2020},
}
@article{przulj2004,
title = {Modeling Interactome: Scale-Free or Geometric?},
shorttitle = {Modeling Interactome},
author = {Pr{\v z}ulj, N. and Corneil, D. G. and Jurisica, I.},
year = {2004},
month = dec,
volume = {20},
pages = {3508--3515},
issn = {1367-4803, 1460-2059},
doi = {10.1093/bioinformatics/bth436},
journal = {Bioinformatics},
language = {en},
number = {18}
}
@article{przulj2006,
title = {Efficient Estimation of Graphlet Frequency Distributions in Protein-Protein Interaction Networks},
author = {Pr{\v z}ulj, N. and Corneil, D. G. and Jurisica, I.},
year = {2006},
month = apr,
volume = {22},
pages = {974--980},
issn = {1367-4803, 1460-2059},
doi = {10.1093/bioinformatics/btl030},
journal = {Bioinformatics},
language = {en},
number = {8}
}
@article{przulj2007,
title = {Biological Network Comparison Using Graphlet Degree Distribution},
author = {Pr{\v z}ulj, Nata{\v s}a},
year = {2007},
month = jan,
volume = {23},
pages = {e177-e183},
issn = {1367-4803, 1460-2059},
doi = {10.1093/bioinformatics/btl301},
annote = {Graphlet distribution},
journal = {Bioinformatics},
language = {en},
number = {2}
}
@Book{przulj2019,
title = {Analyzing Network Data in Biology and Medicine: {{An}} Interdisciplinary Textbook for Biological, Medical and Computational Scientists},
editor = {Pr{\v z}ulj, Nata{\v s}a},
year = {2019},
publisher = {{Cambridge University Press}},
address = {{Cambridge}},
doi = {10.1017/9781108377706},
}
@article{sarajlic2016,
title = {Graphlet-Based Characterization of Directed Networks},
author = {Sarajli{\'c}, Anida and {Malod-Dognin}, No{\"e}l and Yavero{\u g}lu, {\"O}mer Nebil and Pr{\v z}ulj, Nata{\v s}a},
year = {2016},
month = dec,
volume = {6},
pages = {35098},
issn = {2045-2322},
doi = {10.1038/srep35098},
annote = {Graphlet in Directed graphs},
journal = {Scientific Reports},
language = {en},
number = {1}
}
@article{yaveroglu2015,
title = {Revealing the Hidden Language of Complex Networks},
author = {Yavero{\u g}lu, {\"O}mer Nebil and {Malod-Dognin}, No{\"e}l and Davis, Darren and Levnajic, Zoran and Janjic, Vuk and Karapandza, Rasa and Stojmirovic, Aleksandar and Pr{\v z}ulj, Nata{\v s}a},
year = {2015},
month = may,
volume = {4},
pages = {4547},
issn = {2045-2322},
doi = {10.1038/srep04547},
annote = {Graphlet Correlation Distance},
journal = {Scientific Reports},
language = {en},
number = {1}
}