DESCRIPTION

Package: salmonIPM
Title: Integrated Population Models for Pacific Salmonids
Version: 1.6.2
Authors@R: as.person(c(
    "Eric Buhle <eric.buhle@noaa.gov> [aut, cre]", 
    "Mark Scheuerell <scheuerl@uw.edu> [aut]"
  ))
Description: Fits integrated population models (IPMs) or run-reconstruction regressions for anadromous 
    Pacific salmonid population dynamics using a hierarchical Bayesian framework 
    implemented in Stan. Various models are available, representing alternative 
    life-history structures and independent or hierarchically pooled populations.
    Users can specify stage-specific covariate effects and hyper-priors using formula syntax.
Depends:
    R (>= 4.2),
    methods,
    Rcpp (>= 0.12.0)
Imports:
    RcppParallel,
    parallel,
    rstan (>= 2.32.0),
    rstantools (>= 2.4.0),
    posterior,
    distributional,
    loo,
    shinystan,
    stats,
    gnorm,
    mvtnorm,
    dplyr (>= 1.0.0),
    tidyr,
    ggplot2,
    ggdist
LinkingTo: 
    BH (>= 1.84.0),
    Rcpp (>= 1.0.0),
    RcppEigen (>= 0.3.3.3.0),
    RcppParallel,
    rstan (>= 2.32.0),
    StanHeaders (>= 2.32.0)
License: GPL (>= 3) + file LICENSE
Encoding: UTF-8
LazyData: true
Biarch: true
Suggests:
    bayesplot,
    lifecycle,
    knitr,
    rmarkdown
VignetteBuilder: knitr
RoxygenNote: 7.3.2
Roxygen: list(markdown = TRUE)
NeedsCompilation: yes
SystemRequirements: GNU make
URL: https://ebuhle.github.io/salmonIPM/