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Commits on Jul 29, 2021

• Merge pull request nf-core#221 from nf-core/dev

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Commits on Jul 28, 2021

• Merge pull request nf-core#230 from drpatelh/updates

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  drpatelh

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• Update date in CHANGELOG

  drpatelh

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• Re-install updated Nextclade module

  drpatelh

  committed
  32a13ac

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• Fix nf-core#226

  drpatelh

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• Update CHANGELOG

  drpatelh

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• Change ARTIC Guppyplex defaults when using --primer_set_version 1200

  drpatelh

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• Fix bug removing summary reports

  drpatelh

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Commits on Jul 27, 2021

• Fix merge conflicts

  drpatelh

  committed
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• Template update for nf-core/tools version 2.1

  nf-core-bot

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Commits on Jul 22, 2021

• Merge pull request nf-core#224 from drpatelh/updates

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  JoseEspinosa

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• Convert variable to string

  drpatelh

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Commits on Jul 21, 2021

• Replace commas with semi-colon in summary metrics

  drpatelh

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• Fix file pattern regex in JSON schema

  drpatelh

  committed
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• Merge pull request nf-core#220 from drpatelh/updates

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  drpatelh

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Commits on Jul 20, 2021

• Bump version to v2.2

  drpatelh

  committed
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• Replace Pangolin MultiQC custom content with official module

  drpatelh

  committed
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• Small template fixes

  drpatelh

  committed
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• Bump Pangolin to 3.1.7

  drpatelh

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Commits on Jul 15, 2021

• Merge pull request nf-core#219 from drpatelh/updates

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• Amend docs to use medaka model string by default

  drpatelh

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• Merge pull request nf-core#217 from drpatelh/updates

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Commits on Jul 14, 2021

• Bump MultiQC version

  drpatelh

  committed
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• Remove redundant text introduced by sync

  drpatelh

  committed
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• Fix channel issue from updating bedtools genomecov

  drpatelh

  committed
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• Change software to modules everywhere

  drpatelh

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• Remove remnant files from sync

  drpatelh

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• Sort modules.json

  drpatelh

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• Ignore final newlines for JSON files

  drpatelh

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• Make linters happy

  drpatelh

  committed
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• Update CHANGELOG

  drpatelh

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• Update .nf-core.yml

  drpatelh

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• Update kraken2 module

  drpatelh

  committed
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• Update modules and add modules.json

  drpatelh

  committed
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Commits on Jul 13, 2021

• Fix merge conflicts

  drpatelh

  committed
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