From bb91e0b22bc8a010b416c0429d0f5478c718fc00 Mon Sep 17 00:00:00 2001 From: Maximilian Hoffman Date: Mon, 9 Aug 2021 10:10:22 -0400 Subject: [PATCH] Fix dead link, bump doltcli (#161) * Fix dead link, bump doltcli * Poetry update * Fix w no gc * Add gc --- doltpy/__init__.py | 2 +- doltpy/cli/write.py | 5 + poetry.lock | 460 ++++++++++++++++++++++++-------------------- pyproject.toml | 2 +- 4 files changed, 262 insertions(+), 207 deletions(-) diff --git a/doltpy/__init__.py b/doltpy/__init__.py index a9a9bb7..1766c77 100644 --- a/doltpy/__init__.py +++ b/doltpy/__init__.py @@ -3,7 +3,7 @@ if not shutil.which("dolt"): install_dolt = """`dolt` not found in `PATH` -Reference: https://www.dolthub.com/docs/tutorials/installation/ +Reference: https://docs.dolthub.com/getting-started/installation to install: > sudo bash -c 'curl -L https://github.com/dolthub/dolt/releases/latest/download/install.sh | sudo bash' diff --git a/doltpy/cli/write.py b/doltpy/cli/write.py index fd7485d..57d0617 100644 --- a/doltpy/cli/write.py +++ b/doltpy/cli/write.py @@ -26,6 +26,8 @@ def write_pandas( commit: Optional[bool] = False, commit_message: Optional[str] = None, commit_date: Optional[datetime.datetime] = None, + do_continue: Optional[bool] = False, + do_gc: Optional[bool] = True, ): """ @@ -43,6 +45,7 @@ def write_pandas( def writer(filepath: str): clean = df.dropna(subset=primary_key) clean.to_csv(filepath, index=False) + return filepath _import_helper( dolt=dolt, @@ -53,4 +56,6 @@ def writer(filepath: str): commit=commit, commit_message=commit_message, commit_date=commit_date, + do_continue=do_continue, + do_gc=do_gc, ) diff --git a/poetry.lock b/poetry.lock index 9d65edd..58a23cf 100644 --- a/poetry.lock +++ b/poetry.lock @@ -42,6 +42,21 @@ dev = ["coverage", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.int docs = ["sphinx", "zope.interface"] tests = ["coverage", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"] +[[package]] +category = "dev" +description = "Compatibility shim providing selectable entry points for older implementations" +name = "backports.entry-points-selectable" +optional = false +python-versions = ">=2.7" +version = "1.1.0" + +[package.dependencies] +importlib-metadata = {version = "*", markers = "python_version < \"3.8\""} + +[package.extras] +docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] +testing = ["pytest (>=4.6)", "pytest-flake8", "pytest-cov", "pytest-black (>=0.3.7)", "pytest-mypy", "pytest-checkdocs (>=2.4)", "pytest-enabler (>=1.0.1)"] + [[package]] category = "dev" description = "Modern password hashing for your software and your servers" @@ -95,7 +110,7 @@ description = "Python package for providing Mozilla's CA Bundle." name = "certifi" optional = false python-versions = "*" -version = "2020.12.5" +version = "2021.5.30" [[package]] category = "dev" @@ -103,26 +118,22 @@ description = "Foreign Function Interface for Python calling C code." name = "cffi" optional = false python-versions = "*" -version = "1.14.5" +version = "1.14.6" [package.dependencies] pycparser = "*" -[[package]] -category = "dev" -description = "Universal encoding detector for Python 2 and 3" -name = "chardet" -optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "4.0.0" - [[package]] category = "dev" description = "Composable command line interface toolkit" name = "click" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "7.1.2" +python-versions = ">=3.6" +version = "8.0.1" + +[package.dependencies] +colorama = {version = "*", markers = "platform_system == \"Windows\""} +importlib-metadata = {version = "*", markers = "python_version < \"3.8\""} [[package]] category = "dev" @@ -179,7 +190,7 @@ description = "Python interface to Oracle" name = "cx-oracle" optional = false python-versions = "*" -version = "8.1.0" +version = "8.2.1" [[package]] category = "main" @@ -203,7 +214,7 @@ description = "Distribution utilities" name = "distlib" optional = false python-versions = "*" -version = "0.3.1" +version = "0.3.2" [[package]] category = "dev" @@ -211,7 +222,7 @@ description = "Distro - an OS platform information API" name = "distro" optional = false python-versions = "*" -version = "1.5.0" +version = "1.6.0" [[package]] category = "dev" @@ -237,7 +248,7 @@ description = "Multi-container orchestration for Docker" name = "docker-compose" optional = false python-versions = ">=3.4" -version = "1.29.1" +version = "1.29.2" [package.dependencies] PyYAML = ">=3.10,<6" @@ -282,7 +293,7 @@ description = "Slim Python interface for Dolt's CLI API." name = "doltcli" optional = false python-versions = ">=3.6.1,<4.0" -version = "0.1.10" +version = "0.1.14" [package.dependencies] dataclasses = {version = ">=0.6", markers = "python_version < \"3.7\""} @@ -301,14 +312,14 @@ description = "A library for property-based testing" name = "hypothesis" optional = false python-versions = ">=3.6" -version = "6.10.0" +version = "6.14.6" [package.dependencies] attrs = ">=19.2.0" sortedcontainers = ">=2.1.0,<3.0.0" [package.extras] -all = ["black (>=19.10b0)", "click (>=7.0)", "django (>=2.2)", "dpcontracts (>=0.4)", "lark-parser (>=0.6.5)", "libcst (>=0.3.16)", "numpy (>=1.9.0)", "pandas (>=0.25)", "pytest (>=4.6)", "python-dateutil (>=1.4)", "pytz (>=2014.1)", "redis (>=3.0.0)", "rich (>=9.0.0)", "importlib-resources (>=3.3.0)", "importlib-metadata", "backports.zoneinfo (>=0.2.1)", "tzdata (>=2020.4)"] +all = ["black (>=19.10b0)", "click (>=7.0)", "django (>=2.2)", "dpcontracts (>=0.4)", "lark-parser (>=0.6.5)", "libcst (>=0.3.16)", "numpy (>=1.9.0)", "pandas (>=0.25)", "pytest (>=4.6)", "python-dateutil (>=1.4)", "pytz (>=2014.1)", "redis (>=3.0.0)", "rich (>=9.0.0)", "importlib-resources (>=3.3.0)", "importlib-metadata (>=3.6)", "backports.zoneinfo (>=0.2.1)", "tzdata (>=2020.4)"] cli = ["click (>=7.0)", "black (>=19.10b0)", "rich (>=9.0.0)"] codemods = ["libcst (>=0.3.16)"] dateutil = ["python-dateutil (>=1.4)"] @@ -328,8 +339,8 @@ category = "dev" description = "Internationalized Domain Names in Applications (IDNA)" name = "idna" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "2.10" +python-versions = ">=3.5" +version = "3.2" [[package]] category = "main" @@ -337,7 +348,7 @@ description = "Read metadata from Python packages" name = "importlib-metadata" optional = false python-versions = ">=3.6" -version = "4.0.1" +version = "4.6.3" [package.dependencies] zipp = ">=0.5" @@ -345,7 +356,8 @@ typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""} [package.extras] docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] -testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pep517", "pyfakefs", "flufl.flake8", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources (>=1.3)"] +perf = ["ipython"] +testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pep517", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources (>=1.3)"] [[package]] category = "dev" @@ -353,14 +365,14 @@ description = "Read resources from Python packages" name = "importlib-resources" optional = false python-versions = ">=3.6" -version = "5.1.2" +version = "5.2.2" [package.dependencies] -zipp = {version = ">=0.4", markers = "python_version < \"3.8\""} +zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""} [package.extras] docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] -testing = ["pytest (>=4.6)", "pytest-checkdocs (>=1.2.3)", "pytest-flake8", "pytest-cov", "pytest-enabler", "pytest-black (>=0.3.7)", "pytest-mypy"] +testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "pytest-black (>=0.3.7)", "pytest-mypy"] [[package]] category = "dev" @@ -375,12 +387,13 @@ category = "dev" description = "A Python utility / library to sort Python imports." name = "isort" optional = false -python-versions = ">=3.6,<4.0" -version = "5.8.0" +python-versions = ">=3.6.1,<4.0" +version = "5.9.3" [package.extras] colors = ["colorama (>=0.4.3,<0.5.0)"] pipfile_deprecated_finder = ["pipreqs", "requirementslib"] +plugins = ["setuptools"] requirements_deprecated_finder = ["pipreqs", "pip-api"] [[package]] @@ -407,7 +420,7 @@ description = "More routines for operating on iterables, beyond itertools" name = "more-itertools" optional = false python-versions = ">=3.5" -version = "8.7.0" +version = "8.8.0" [[package]] category = "dev" @@ -525,8 +538,20 @@ category = "dev" description = "Utility library for gitignore style pattern matching of file paths." name = "pathspec" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.8.1" +python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" +version = "0.9.0" + +[[package]] +category = "dev" +description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." +name = "platformdirs" +optional = false +python-versions = ">=3.6" +version = "2.2.0" + +[package.extras] +docs = ["Sphinx (>=4)", "furo (>=2021.7.5b38)", "proselint (>=0.10.2)", "sphinx-autodoc-typehints (>=1.12)"] +test = ["appdirs (1.4.4)", "pytest (>=6)", "pytest-cov (>=2.7)", "pytest-mock (>=3.6)"] [[package]] category = "main" @@ -617,8 +642,8 @@ category = "dev" description = "Persistent/Functional/Immutable data structures" name = "pyrsistent" optional = false -python-versions = ">=3.5" -version = "0.17.3" +python-versions = ">=3.6" +version = "0.18.0" [[package]] category = "dev" @@ -626,7 +651,7 @@ description = "pytest: simple powerful testing with Python" name = "pytest" optional = false python-versions = ">=3.6" -version = "6.2.3" +version = "6.2.4" [package.dependencies] attrs = ">=19.2.0" @@ -648,14 +673,15 @@ description = "Pytest plugin for measuring coverage." name = "pytest-cov" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "2.11.1" +version = "2.12.1" [package.dependencies] coverage = ">=5.2.1" pytest = ">=4.6" +toml = "*" [package.extras] -testing = ["fields", "hunter", "process-tests (2.0.2)", "six", "pytest-xdist", "virtualenv"] +testing = ["fields", "hunter", "process-tests", "six", "pytest-xdist", "virtualenv"] [[package]] category = "dev" @@ -663,10 +689,10 @@ description = "Simple pytest fixtures for Docker and docker-compose based tests" name = "pytest-docker" optional = false python-versions = ">=3.6" -version = "0.10.1" +version = "0.10.3" [package.dependencies] -attrs = ">=19,<21" +attrs = ">=19,<22" docker-compose = ">=1.27.3,<2.0" pytest = ">=4.0,<7.0" @@ -689,8 +715,8 @@ category = "dev" description = "Read key-value pairs from a .env file and set them as environment variables" name = "python-dotenv" optional = false -python-versions = "*" -version = "0.17.0" +python-versions = ">=3.5" +version = "0.19.0" [package.extras] cli = ["click (>=5.0)"] @@ -725,25 +751,24 @@ description = "Alternative regular expression module, to replace re." name = "regex" optional = false python-versions = "*" -version = "2021.4.4" +version = "2021.8.3" [[package]] category = "dev" description = "Python HTTP for Humans." name = "requests" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "2.25.1" +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" +version = "2.26.0" [package.dependencies] certifi = ">=2017.4.17" -chardet = ">=3.0.2,<5" -idna = ">=2.5,<3" urllib3 = ">=1.21.1,<1.27" +idna = {version = ">=2.5,<4", markers = "python_version >= \"3\""} [package.extras] -security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"] socks = ["PySocks (>=1.5.6,<1.5.7 || >1.5.7)", "win-inet-pton"] +use_chardet_on_py3 = ["chardet (>=3.0.2,<5)"] [[package]] category = "main" @@ -771,7 +796,7 @@ description = "Sorted Containers -- Sorted List, Sorted Dict, Sorted Set" name = "sortedcontainers" optional = false python-versions = "*" -version = "2.3.0" +version = "2.4.0" [[package]] category = "main" @@ -799,7 +824,7 @@ description = "module for creating simple ASCII tables" name = "texttable" optional = false python-versions = "*" -version = "1.6.3" +version = "1.6.4" [[package]] category = "dev" @@ -823,7 +848,7 @@ description = "Backported and Experimental Type Hints for Python 3.5+" name = "typing-extensions" optional = false python-versions = "*" -version = "3.7.4.3" +version = "3.10.0.0" [[package]] category = "dev" @@ -831,7 +856,7 @@ description = "HTTP library with thread-safe connection pooling, file post, and name = "urllib3" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4" -version = "1.26.4" +version = "1.26.6" [package.extras] brotli = ["brotlipy (>=0.6.0)"] @@ -843,20 +868,21 @@ category = "dev" description = "Virtual Python Environment builder" name = "virtualenv" optional = false -python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7" -version = "20.4.4" +python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" +version = "20.7.0" [package.dependencies] -appdirs = ">=1.4.3,<2" +"backports.entry-points-selectable" = ">=1.0.4" distlib = ">=0.3.1,<1" filelock = ">=3.0.0,<4" +platformdirs = ">=2,<3" six = ">=1.9.0,<2" importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} importlib-resources = {version = ">=1.0", markers = "python_version < \"3.7\""} [package.extras] docs = ["proselint (>=0.10.2)", "sphinx (>=3)", "sphinx-argparse (>=0.2.5)", "sphinx-rtd-theme (>=0.4.3)", "towncrier (>=19.9.0rc1)"] -testing = ["coverage (>=4)", "coverage-enable-subprocess (>=1)", "flaky (>=3)", "pytest (>=4)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.1)", "pytest-mock (>=2)", "pytest-randomly (>=1)", "pytest-timeout (>=1)", "packaging (>=20.0)", "xonsh (>=0.9.16)"] +testing = ["coverage (>=4)", "coverage-enable-subprocess (>=1)", "flaky (>=3)", "pytest (>=4)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.1)", "pytest-mock (>=2)", "pytest-randomly (>=1)", "pytest-timeout (>=1)", "packaging (>=20.0)"] [[package]] category = "main" @@ -872,7 +898,7 @@ description = "WebSocket client for Python with low level API options" name = "websocket-client" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "0.58.0" +version = "0.59.0" [package.dependencies] six = "*" @@ -883,18 +909,18 @@ description = "Backport of pathlib-compatible object wrapper for zip files" name = "zipp" optional = false python-versions = ">=3.6" -version = "3.4.1" +version = "3.5.0" [package.extras] docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"] -testing = ["pytest (>=4.6)", "pytest-checkdocs (>=1.2.3)", 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