DESCRIPTION

Type: Package
Package: parcutils
Title: Utility Functions To Deal Day To Day Bioinformatics Tasks.
Version: 0.1.0
Author: Chirag Parsania
Maintainer: Chirag Parsania <chirag.parsania@gmail.com>
Description: The package contains utility functions to deal with day to
    day bioinformatics tasks. Most of the functions are related to RNA-seq
    data analysis and visualization.
License: MIT + file LICENSE
URL: https://github.com/cparsania/parcutils
BugReports: https://github.com/cparsania/parcutils/issues
Depends: 
    ggplot2,
    magrittr
Imports: 
    AnnotationDbi,
    BSgenome,
    circlize (>= 0.4.13),
    cli (>= 3.0.1),
    clusterProfiler,
    ComplexHeatmap,
    DESeq2 (>= 1.30.0),
    dplyr (>= 0.8.5),
    EnhancedVolcano,
    EnrichedHeatmap,
    enrichplot,
    forcats,
    fs,
    GenomicRanges (>= 1.38.0),
    GGally,
    ggcorrplot,
    ggeasy,
    ggrepel,
    ggvenn,
    glue,
    MetBrewer (>= 0.1.0),
    msigdbr,
    org.Mm.eg.db,
    plyranges,
    progress,
    purrr (>= 0.3.4),
    readr (>= 2.0.1),
    rlang (>= 0.4.11),
    rtracklayer (>= 1.46.0),
    scales,
    stringr,
    tibble (>= 3.0.1),
    tidyr (>= 1.1.3),
    tidyselect (>= 1.1.1),
    TidyWrappers (>= 0.0.1.9000),
    tools (>= 3.6.2),
    UpSetR (>= 1.4.0),
    viridis,
    writexl
Suggests: 
    BSgenome.Hsapiens.UCSC.hg38,
    org.Hs.eg.db
Remotes: 
    cparsania/TidyWrappers,
    jokergoo/circlize
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.2