# LLM_SVs # Semantic Labeling of Structural Variants using LLM ## Structural variants ``` Deletions : Loss of a segment of DNA Duplications: Repeated segments of DNA Inversions: Reversal of segment of DNA Translocations: Movement of DNA segments between non-homologous chromosomes Insertions: Addition of foreign DNA segments ``` ## Potential Workflow ``` Input: A VCF file with structural variant calls Processing: Extract relevant information (type, location, impact) LLM interaction: Pass the extracted information to the LLM to generate descriptions and labels Output: Annotated SV data with semantic descriptions, classification and potential implications ```   ## Contributors: ``` 1) Ramanandan Prabhakaran 2) Karolis 3) Veena Ghorakvai 4) Anika Pal ```