v2.3.1

The Cache Ontology Set functionality was broken due to the previous refactoring. This update fixes it.

v2.3.0

This update allows the user to use a known ontology acronym instead of an explicit download link.
Additionally, the cache mechanisms have been reorganized. Now, cache_ontology returns a class object that allows a user to directly call the map function with the cache.

v2.1.0

Adds bug fixes as well as comments to output CSVs. Also changes "blacklist" to "blocklist" in the preprocessing module.

v2.0.2

Fixes bugs in Source Term IDs and checking if an object is a dictionary, both pertaining to the map tagged terms functionality.

v2.0.0

Added tagging functionality to both the text2term mapping functions (by adding a new function) and to the preprocessing module. Also changed the preprocessing to return a dictionary. Fixes some minor bugs.

v1.2.1

• Include terms from imported ontologies in term collection and mapping
• Collect both OBO 'related' and 'broad' synonyms for use in mapping
• Upgrade version of 'setuptools' to address a security vulnerability
• Enable serialization of ontology term neighborhood graphs when some ancestors are not present
• Improve logging and exception handling

v1.2.0

Adds preprocessing to the functionality.

v1.1.1

Fixes bugs that prevented filtering on cached ontologies and using stored terms.

v1.1.0

Implements caching into the tool for both programatic and command line usage.

v1.0.0

Initial release with core functionality. This is the release as posted on PyPi.