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[New Format]: Lightning Pose #628

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weiglszonja opened this issue Nov 3, 2023 · 0 comments · Fixed by #633
Closed
2 tasks done

[New Format]: Lightning Pose #628

weiglszonja opened this issue Nov 3, 2023 · 0 comments · Fixed by #633

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@weiglszonja
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What format would you like to see added to NeuroConv?

Support writing PoseEstimationSeries from Lightning Pose output.

  • add helper method add_pose_estimation_series() in neuroconv.tools which uses ndx-pose
  • add LightningPoseInterface in neuroconv.datainterfaces.behavior
  • extract metadata from csv: scorer, key point names
  • extract timestamps from video (should also be able to override)

Example data: https://github.com/danbider/lightning-pose/tree/main/data/mirror-mouse-example

Does the format have any documentation?

https://github.com/danbider/lightning-pose/blob/main/docs/README.md

Existing APIs for format

No response

Do you have any example files you are willing to share?

Example data: https://github.com/danbider/lightning-pose/tree/main/data/mirror-mouse-example

Do you have any interest in helping implement the feature?

Yes.

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