From 399b3e4f353004bb270ea146f21009bc94e05c5f Mon Sep 17 00:00:00 2001
From: Kris Thielemans <k.thielemans@ucl.ac.uk>
Date: Mon, 27 Jul 2020 21:32:51 +0100
Subject: [PATCH] fix handling of arguments in get_mmr_fromfile

It ignored values for petNoise etc

Fixes #3
---
 brainweb/utils.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/brainweb/utils.py b/brainweb/utils.py
index 8033e8e..1911411 100644
--- a/brainweb/utils.py
+++ b/brainweb/utils.py
@@ -256,8 +256,8 @@ def get_mmr_fromfile(brainweb_file,
             '.bin.gz', '.npz' if PetClass == FDG else
             '.{}.npz'.format(PetClass.__name__)),
         dat,
-        petNoise=1.0, t1Noise=0.75, t2Noise=0.75,
-        petSigma=1.0, t1Sigma=1.0, t2Sigma=1.0,
+        petNoise=petNoise, t1Noise=t1Noise, t2Noise=t2Noise,
+        petSigma=petSigma, t1Sigma=t1Sigma, t2Sigma=t2Sigma,
         PetClass=PetClass)