From f86626292f7dc67048ef0110d9beda96be29e73d Mon Sep 17 00:00:00 2001
From: David Jones <drj@sanger.ac.uk>
Date: Sun, 9 Sep 2018 10:28:06 +0100
Subject: [PATCH 1/2] Bump version and CHANGES.md

---
 CHANGES.md | 4 ++++
 Makefile   | 2 +-
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/CHANGES.md b/CHANGES.md
index f7b31ee..44c78ca 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,5 +1,9 @@
 # CHANGES
 
+## 1.13.5
+
+* Remove printf that causes all contigs to be printed to stderr.
+
 ## 1.13.4
 
 * Fix incorrect file path introduced in 1.13.3
diff --git a/Makefile b/Makefile
index 48a6f7f..45051dd 100644
--- a/Makefile
+++ b/Makefile
@@ -1,4 +1,4 @@
-CAVEMAN_VERSION=1.13.4
+CAVEMAN_VERSION=1.13.5
 TEST_REF?=""
 #Compiler
 CC?=gcc

From 6a2b57f44a386a0c7b75993c1ff942140004e908 Mon Sep 17 00:00:00 2001
From: David Jones <drj@sanger.ac.uk>
Date: Sun, 9 Sep 2018 10:28:28 +0100
Subject: [PATCH 2/2] Remove noisy printf statement

---
 src/fai_access.c | 1 -
 1 file changed, 1 deletion(-)

diff --git a/src/fai_access.c b/src/fai_access.c
index 8277388..1b8c667 100644
--- a/src/fai_access.c
+++ b/src/fai_access.c
@@ -79,7 +79,6 @@ int fai_access_get_count_length_all_contigs(char *fa_loc, int *count, int *total
 	while(fgets(rd, 1000, fai) != NULL){
 		check(rd != NULL,"Invalid line read\n");
         *count = *count+1;
-        fprintf(stderr,"********** %s\n", rd);
 		int chk = sscanf(rd,"%s\t%d\t%*d\t%*d\t%*d",chr_name,&length);
 		check(chk == 2,"Wrong number of entries (%d) found in fasta index file line %s",chk,rd);
         *total_len += strlen(chr_name);