Is it possible for you to add .bigwig as inputfile format option for Quantifying Enhancer Activity?

[ezioljj]

We are using ChromImpute for H3K27ac and ATAC signal imputation, through this way, we can obtain a greatly enlarged sample set for exploring the whole landscape of tissue-specific E-P regulation. However, the imputation output will be in .bigwig format. Thus, we want to ask if you could add another function or modify your script to take .bigwig as an option instead of just taking .bam (run.neighborhoods.py)?

Thank you for reply.