From 111c42d81cf64c9be46cb012b0a2bc1e89b9f2bb Mon Sep 17 00:00:00 2001 From: Jamie Morton Date: Fri, 23 Jun 2017 10:19:59 -0700 Subject: [PATCH] Update README.md --- README.md | 17 +++++++++++++++-- 1 file changed, 15 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 6351961..2d0f4e2 100644 --- a/README.md +++ b/README.md @@ -14,10 +14,23 @@ gneiss is currently in alpha. We are actively developing it, and __backward-inc # Installation -To install this package, it is recommended to use conda. An environment can installed as follows +To install this package, it is recommended to use conda. First make sure that the appropriate channels are configured. ``` -conda create -n gneiss_env gneiss python=3.5 -c biocore -c qiime2 +conda config --add channels https://conda.anaconda.org/bioconda +conda config --add channels https://conda.anaconda.org/biocore +conda config --add channels https://conda.anaconda.org/qiime2 +conda config --add channels https://conda.anaconda.org/qiime2/label/r2017.6 +``` + +Then gneiss can be installed in a conda environment as follows +``` +conda create -n gneiss_env gneiss +``` +To install the most up to date version of gneiss, run the following command + +``` +pip install git+https://github.com/biocore/gneiss.git ``` # Examples