environment.yml

name: data101

channels:
- conda-forge

dependencies:
  # Items required for basic level functionality
  - gh-scoped-creds==4.1
  - git==2.47.1
  - jupyter-archive==3.4.0
  - jupyter-offlinenotebook==0.3.1
  - jupyter-resource-usage==1.1.0  
  - jupyter-server-proxy==4.4.0
  - jupyter_server==2.15.0 
  - jupyterhub==5.2.1
  - jupyterlab==4.3.4
  - jupyterlab-git==0.50.2
  - jupyterlab_rise==0.43.1
  - jupytext==1.16.6
  - nbgitpuller==1.2.1
  - notebook==7.3.2
  - pip==24.3.1  
  - python==3.11.*

  # other stuff
  # 2025-01-22 - Jon F, unless otherwise noted each commented out package is one
  # the instructors for Spring 2025 have said is not required.  Leaving them
  # commented out for now until end of semester when I'll likely remove them
  # from the file entirely.
  - altair==5.0.1
  - beautifulsoup4==4.11.1
  - black==22.6.0
  - bokeh==2.4.3
#  - bqplot==0.12.34
#  - cartopy==0.24.0
  - coverage==7.2.2
  - cython==0.29.32
  - dbt-postgres==1.9.0
#  - distributed==2023.6.0
  - folium==0.14.0
#  - fortran-magic==0.7
#  - graphviz==9.0.0
  - h5netcdf==1.0.2
#  - h5py==3.7.0
#  - hdf4==4.2.15
#  - hdf5==1.12.2
#  - intake==0.6.5
#  - intake-esm==2021.8.17
#  - intake-xarray==0.6.0
#  - ipycanvas==0.12.1
#  - ipydatagrid==1.4.0
#  - ipympl==0.9.2
  - ipyparallel==9.0.0
  - ipython-sql==0.3.9
  - ipywidgets==8.1.5
  - jsonschema==4.23.0
  - jupysql==0.10.17
  - jupyter-book==0.15.1
#  - jupyter_bokeh==2.0.4
  - jupyterlab-favorites==3.0.0
  - jupyterlab-geojson==3.2.0
  - jupyterlab-variableinspector==3.0.9
#  - jupyterlab_pygments==0.2.2
  - jupyterlab_server==2.27.3
  - jupyterlab_widgets==3.0.13
  - matplotlib==3.7.1
  - matplotlib-inline==0.1.6
#  - micro==2.0.8
#  - mock==4.0.3
  - mongo-tools==4.0.4
#  - nbclassic==1.0.0
  - nbdime==4.0.2
  - networkx==2.8.6
  - numba==0.60.0
  - numpy==1.26.4
  - pandas==2.0.3
  - pandoc==2.12
  - pandocfilters==1.5.0
  - pep8==1.7.1
  - pgspecial==1.13.1
#  - pillow==10.0.1 
  - plotly==5.13.1
#  - pooch==1.6.0
  - prettytable==3.12.0
  - psycopg==3.1.11
  - pyarrow==9.0.0
  - pymongo==4.10.1
  - pypdf2==2.10.4
  - pytables==3.7.0
  - pytest==8.3.2
  - pytest-cov==3.0.0
  - pytest-notebook==0.10.0
#  - python-graphviz==0.20.1
  - python-pdfkit==1.0.0
  - requests==2.32.3
#  - scikit-image==0.19.3
#  - scikit-learn==1.2.2
  - scipy==1.10.1
  - seaborn==0.13.2
#  - sphinx-jupyterbook-latex==0.5.2
  - sqlalchemy==2.0.32
  - sqlparse==0.5.3
#  - statsmodels==0.14.0
#  - sympy==1.13.2
#  - syncthing==1.20.4
#  - tornado==6.2.0
  - tqdm==4.64.0
#  - xarray==2023.5.0
  - xlrd==2.0.1
#  - websockify==0.11.0

  - pip:
    # items required for basic functionality
    - nbconvert[webpdf]==7.16.5
    - git-credential-helpers==0.2
    - otter-grader==6.0.4

    # other stuff
    - jupyter-desktop-server==0.1.3
    - iwut==0.0.4
    # [DH-418] cannot get mamba to install this
#    - tensorflow-cpu==2.18.0
    # [DH-418] cannot get mamba to install this
#    - geopandas==0.12.1
    # disable until fixed (probably this:  https://github.com/jupyterlab/jupyter-collaboration/issues/162)
    # DH-418, 2024-01-16, above issue still not fixed.  Also this package is available in condaforge
    # https://anaconda.org/conda-forge/jupyter-collaboration
    # - jupyter_collaboration==1.0.1
    # - git+https://github.com/shaneknapp/python-popularity-contest.git@add-error-handling
    - jupyterlab-a11y-checker==0.1.3 # Adding a11y-checker for Data 101 staff's exploration