-
Notifications
You must be signed in to change notification settings - Fork 178
Home
Benjamin Buchfink edited this page Dec 12, 2020
·
31 revisions
# downloading the tool
wget http://github.com/bbuchfink/diamond/releases/download/v2.0.5/diamond-linux64.tar.gz
tar xzf diamond-linux64.tar.gz
# creating a diamond-formatted database file
./diamond makedb --in reference.fasta -d reference
# running a search in blastp mode
./diamond blastp -d reference -q queries.fasta -o matches.tsv
# running a search in blastx mode
./diamond blastx -d reference -q reads.fasta -o matches.tsv