torch-py3.def

BootStrap: docker
From: nvidia/cuda:10.1-cudnn7-devel-ubuntu18.04

%help
    base recipe: https://github.com/NIH-HPC/singularity-examples

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%labels
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MAINTAINER Jongsu Kim

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%environment
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export CUDA_PATH=/usr/local/cuda
export PATH=$CUDA_PATH/bin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
export LD_LIBRARY_PATH=$CUDA_PATH/lib64:/usr/lib/x86_64-linux-gnu:/lib:/lib64

# pyenv
export PYENV_ROOT="$HOME/.pyenv"
export PATH=$PYENV_ROOT/bin:$PATH
if which pyenv > /dev/null; then eval "$(pyenv init -)"; fi
if which pyenv > /dev/null; then eval "$(pyenv virtualenv-init -)"; fi

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%post
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export DEBIAN_FRONTEND=noninteractive
# select mirror
apt-get update 

# Prerequisites for python 3
apt-get install -y build-essential libssl-dev zlib1g-dev libbz2-dev \
    libreadline-dev libsqlite3-dev wget curl llvm libncurses5-dev libncursesw5-dev \
    xz-utils tk-dev libffi-dev liblzma-dev python-openssl git

# select mirrors 
apt-get install -y --no-install-recommends python3-dev python3-pip python3-setuptools python3-wheel
pip3 install --upgrade pip
python3 -m pip install --upgrade setuptools wheel
python3 -m pip install apt-mirror-updater
apt-mirror-updater --auto-change-mirror

# pkg
# add for mscorefonts-installer
# add-apt-repository multiverse
# accept EULA for mscorefonts 
echo ttf-mscorefonts-installer msttcorefonts/accepted-mscorefonts-eula select true | debconf-set-selections
apt-get update 
apt-get install -y ttf-mscorefonts-installer
apt-get install -y libhdf5-dev locales tzdata python3-tk
apt-get install -y chromium-browser firefox
apt-get install -y libnetcdf-dev libnetcdff-dev
apt-get clean

# locales
locale-gen --purge en_US.UTF-8
#echo "LC_ALL=en_US.UTF-8" >> /etc/environment
#echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen
#echo "LANG=en_US.UTF-8" > /etc/locale.conf
#locale-gen en_US.UTF-8
echo -e 'LANG="en_US.UTF-8"\nLANGUAGE="en_US:en"\n' > /etc/default/locale
dpkg-reconfigure locales

# TZ
export TZ="Asia/Seoul"
ln -snf /usr/share/zoneinfo/${TZ} /etc/localtime 
echo ${TZ} > /etc/timezone 
dpkg-reconfigure tzdata --frontend noninteractive tzdata

export HDF5_DIR=/usr/lib/x86_64-linux-gnu/hdf5/serial/

# Gecko Driver
export GECKO_DRIVER_VERSION='v0.26.0'
wget https://github.com/mozilla/geckodriver/releases/download/$GECKO_DRIVER_VERSION/geckodriver-$GECKO_DRIVER_VERSION-linux64.tar.gz
tar -xvzf geckodriver-$GECKO_DRIVER_VERSION-linux64.tar.gz
rm geckodriver-$GECKO_DRIVER_VERSION-linux64.tar.gz
chmod +x geckodriver
cp geckodriver /usr/local/bin/

# create some generic mount points
mkdir -p /mnt/data /mnt/input /mnt/output /mnt/ref /mnt/code /mnt/work