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cpyImagingMSpec Documentation Status

Scoring imaging mass spectrometry images for multiple isotopes.

Installation

Binary builds are provided for convenience, use pip install cpyImagingMSpec. (You might have to run pip install --upgrade pip first, its version should be at least 8.1.1.)

If it didn't work for you or you have security concerns, here's how to install the package from source:

  • Install cmake and a recent version of g++, preferably 5.3
    • OS X: brew install gcc5
    • Ubuntu: install gcc-5 package (on older versions from ubuntu-toolchain-r PPA)
    • Windows: install MSYS2 and the build toolchain (see wheel_builders/README.md)
  • Call the appropriate script from wheel_builders folder with arguments 'ims-cpp ims_cffi'.