diff --git a/Machines/dav_modules b/Machines/dav_modules index fd446245..5be4bfa2 100755 --- a/Machines/dav_modules +++ b/Machines/dav_modules @@ -13,7 +13,7 @@ module load ncl/6.6.2 # clone the ncat virtualenv first with helper script ncar_pylib # use "ncar_pylib --help" to see all options -ncar_pylib -c 20190326 ${pp_dir}/cesm-env2 +ncar_pylib -c 20190718 ${pp_dir}/cesm-env2 export PYTHONPATH=${pp_dir}/cesm-env2/lib/python2.7/site-packages diff --git a/averager/pp_tests/runAvg_mpi_dav.sh b/averager/pp_tests/runAvg_mpi_dav.sh new file mode 100755 index 00000000..c454a896 --- /dev/null +++ b/averager/pp_tests/runAvg_mpi_dav.sh @@ -0,0 +1,62 @@ +#! /bin/bash -l + +#SBATCH -n 16 +#SBATCH -N 4 +#SBATCH --ntasks-per-node=4 +#SBATCH -t 00:05:00 +#SBATCH -p dav +#SBATCH -J atm_averages_dav +#SBATCH -A P93300606 +#SBATCH --mem 10G +#SBATCH -e atm_averages_dav.err.%J +#SBATCH -o atm_averages_dav.out.%J +#SBATCH -m block + + +if [ ! -e /gpfs/fs1/work/aliceb/sandboxes/dev/postprocessing_dav/cesm-env2/bin ]; then + echo "*************************************************************************************" + echo "CESM atm_averages_dav exiting due to non-existant python virtual environment in" + echo " /gpfs/fs1/work/aliceb/sandboxes/dev/postprocessing_dav/cesm-env2/bin" + echo "You must first run:" + echo "$POSTPROCESS_PATH/create_python_env -machine [machine]" + echo "*************************************************************************************" + exit +fi + + +module purge + + + + +## activate the virtualenv that contains all the non-bootstrapped dependencies + +cd /gpfs/fs1/work/aliceb/sandboxes/dev/postprocessing_dav/cesm-env2/bin +echo "Running from virtualenv directory:" +pwd +. activate + +## load the boot-strap modules + + +module load python/2.7.14 + +module load intel/17.0.1 + +module load ncarenv + +module load ncarcompilers + +module load impi + +module load netcdf/4.6.1 + +module load nco/4.7.4 + +module load ncl/6.4.0 + +export POSTPROCESS_PATH=/gpfs/fs1/work/aliceb/sandboxes/dev/postprocessing_dav + +srun /gpfs/fs1/work/aliceb/sandboxes/dev/postprocessing_dav/averager/pp_tests/test_atm_series.py + +