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inTravisWheelerLab/NINJA (press backspace or delete to remove)Describe the bug Download links for 0.99-cluster_only point to an older non-cluster version of NINJA.
To Reproduce
curl -sSLO https://github.com/TravisWheelerLab/NINJA/archive/refs/tags/0.99-cluster_only.tar.gz ...
rpm78
- 1
- Opened on Jun 12, 2024
- #46
As the title shows, I now need to run it on an ARM chip. How can I compile it successfully? image image
z4668640
- 9
- Opened on Nov 9, 2023
- #44
Hello. I m having issues running Ninja with some alignments with the following error:
error building tree
10000
java.lang.ArrayIndexOutOfBoundsException: 10000
at com.traviswheeler.ninja.SequenceFileReader. ...
J-Calvelo
- 1
- Opened on Jan 31, 2023
- #43
Hi @traviswheeler ,
Sorry that I m not sure whether it is suitable to ask this question here or not. I m now using the code (ver 1.2.2) from
your website. Thanks for the well organized code so that even ...
elichienxD
- 2
- Opened on Jan 24, 2022
- #42
Any ideas what could be going on? (repeatmodeler)
cris@AWRIBIO02:/mnt/e70c0819-464b-4569-bbb6-cbc208b1daa1/cris/work/installers/NINJA-0.98-cluster_only/NINJA$ make all
g++ -std=gnu++11 -Wall -mssse3 -fopenmp ...
caonetto
- 2
- Opened on Aug 20, 2021
- #41
Distance reader implementations have apparently redundant code. For example, atoi.
enhancement
glesica
- Opened on Aug 6, 2020
- #39
Right now the same basic forward declarations are shared in a bunch of places. We ought to unify those to the extent
possible using an abstract base class.
enhancement
- Opened on Aug 4, 2020
- #37
Dear Team,
I encountered this error when building the NINJA: g++-7 -std=gnu++11 -Wall -mssse3 -fopenmp -O3 -c -o NINJA/Stack.o
NINJA/Stack.cpp make: g++-7: Command not found builtin : recipe for target ...
XClaws
- 6
- Opened on Jul 10, 2020
- #35
Examples
Sample files that we can use both for the tests and as part of the documentation Put a separate README in the examples
directory that explains what they are and how to run them and what the output ...
- Opened on Feb 5, 2020
- #33
Documentation comments
It would be nice if every method and class had a concise explanation of how it fits into the overall architecture and
what it can be expected to do… We won’t achieve this, but we ...
- Opened on Feb 5, 2020
- #32
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