From e828d892e663cc07a69b62013d50f571d679f3a0 Mon Sep 17 00:00:00 2001 From: Eduard Kerkhoven Date: Tue, 5 Nov 2024 21:08:53 +0100 Subject: [PATCH 1/2] fix: keep test-specific PR reference in sep. lines --- data/testResults/README.md | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/data/testResults/README.md b/data/testResults/README.md index 160c9df5..7337e019 100644 --- a/data/testResults/README.md +++ b/data/testResults/README.md @@ -2,7 +2,12 @@ The file here contains results from the [MACAW](https://github.com/Devlin-Moyer/macaw) `dead_end_test` and `duplicate_test` tests, and from cell-line specific gene essentiality prediction based on the [Hart _et al._ (2015)](https://doi.org/10.1016/j.cell.2015.11.015) dataset. -The test results shown here were obtained by the GitHub Actions run in **PR #882** (MACAW) and **PR #675** (gene essentiality), and will be updated by any subsequent PR. Summary results are shown as a comment in the corresponding PR. +The test results shown here were obtained by the GitHub Actions run in: + +- **PR #882** (MACAW) +- **PR #675** (gene essentiality) + +The results will be updated by any subsequent pull request. Summary results are shown as a comment in the corresponding pull request. ### MACAW: `dead_end_test` Looks for metabolites in Human-GEM that can only be produced by all reactions they participate in or only consumed, then identifies all reactions that are prevented from sustaining steady-state fluxes because of each of these dead-end metabolites. The simplest case of a dead-end metabolite is one that only participates in a single reaction. Also flags all reversible reactions that can only carry fluxes in a single direction because one of their metabolites can either only be consumed or only be produced by all other reactions it participates in. From fb57890c126629335a92b2a9c50e99e82a7dada9 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 5 Nov 2024 20:18:34 +0000 Subject: [PATCH 2/2] chore: add macaw test result --- data/testResults/README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/data/testResults/README.md b/data/testResults/README.md index 7337e019..3e59463a 100644 --- a/data/testResults/README.md +++ b/data/testResults/README.md @@ -4,7 +4,7 @@ The file here contains results from the [MACAW](https://github.com/Devlin-Moyer/ The test results shown here were obtained by the GitHub Actions run in: -- **PR #882** (MACAW) +- **PR #906** (MACAW) - **PR #675** (gene essentiality) The results will be updated by any subsequent pull request. Summary results are shown as a comment in the corresponding pull request.