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Write out BAM file of muti-mapping reads for Bori for next update #7

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StevenWingett opened this issue Jul 3, 2019 · 0 comments
Open

Write out BAM file of muti-mapping reads for Bori for next update #7

StevenWingett opened this issue Jul 3, 2019 · 0 comments
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enhancement New feature or request

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@StevenWingett
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Hi Bori,

HiCUP won’t count them directly, but they can be counted/filtered using the FASTQ IDs in the resulting BAM file. I’ve made a note in the Git repository to add this feature.

Cheers,

Steven
@StevenWingett StevenWingett added the enhancement New feature or request label May 14, 2020
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@StevenWingett