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Speed up scripts #102

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fys666 opened this issue Jun 13, 2024 · 1 comment
Open

Speed up scripts #102

fys666 opened this issue Jun 13, 2024 · 1 comment

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@fys666
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fys666 commented Jun 13, 2024

The current script is too slow to process, have you considered optimizing it? Use multi-process or multi-threading to improve the speed, both the code for filtering and removing PCR duplicates are running too slow, you've done a great job, but still hope you can improve and optimize it, thanks!

@fys666
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fys666 commented Jun 13, 2024

In fact, There's no need to use iterators to process line by line to save memory, everyone is rich in computational resources these days

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