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Feature/gfsv16b BUFR sounding EE2 compliance with a unified dbn_alert approach #136

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Feature/gfsv16b BUFR sounding EE2 compliance with a unified dbn_alert approach #136

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GuangPingLou-NOAA
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It was decided all GFS V16 dbn_alerts use the same statement in the jjob scripts:
export DBNROOT=${DBNROOT:-${UTILROOT}/fakedbn}

@GuangPingLou-NOAA
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It was decided that the dbn_alert will be included in config.base file, hence this update is no longer necessary. Pull the request.

lgannoaa pushed a commit that referenced this pull request Sep 23, 2020
@yangfanglin
modified: Externals.cfg and sorc/checkout.sh to check out model tag G…
14dd3c9 
…FS.v16.0.7

   and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:

1) Inline POST Issues #136 and $142
   * Update ceiling height calculation for global FV3.
   * add low,middle,high instantaneous cloud fraction
   * add radar reflectivity at model layers 1 and 2 , and radar reflectivities at 1 and 4-km height.
   * fix a bug in initializing DBZI
   * output mixed layer CAPE/CIN
   * remove simulated GOES-12 brightness temperature.
   * change the names of time averaged low/mid/high cloud fractions in grib2 files
     from "TCDC" to "LCDC/MCDC/HCDC", respectively.

2) Model Issue #152
   * update in-line post control files
   * upgrade post library to 8.0.9 for hera and wcoss_dell_p3
KateFriedman-NOAA pushed a commit to KateFriedman-NOAA/global-workflow that referenced this pull request Nov 16, 2020
@jkhender
Merged with 26Jun feature/gfsv16b branch
99b8105 
Corrected setting of nwat for Thompson MP in config.fcst

Squashed commit of the following:

commit 28b1faf
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Jun 26 02:31:18 2020 +0000

    modified:   config.vrfy to add
        elif [ $machine = "HERA" ] ; then
            export RUNGFSMOSSH="$HOMEgfs/scripts/run_gfsmos_master.sh.hera"

commit 61f4a52
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Jun 26 02:21:33 2020 +0000

    corrected a typo in  hpssarch_gen.sh
    -     echo  "${dirname}${head}atma000.ensres${SUFFIX}  " >>gdas.txt
    +     echo  "${dirname}${head}atma009.ensres${SUFFIX}  " >>gdas.txt

commit b10a930
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Thu Jun 25 20:25:30 2020 +0000

    modified:   config.vrfy to point a different syndat directory on Hera
           export COMROOTp1="/scratch1/NCEPDEV/global/glopara/com"
           export COMINsyn=${COMINsyn:-${COMROOTp1}/gfs/prod/syndat}

commit b8192e5
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 25 18:20:01 2020 +0000

    Issue #1:  HPSS archive and MOS script changes

     * replace enkf member atmi*nc with ratmi*nc in HPSS enkf tarballs

     * add ensemble resolution analysis to HPSS gdas tarball

     * allow variable range to be externally set in run_gfsmos_master scripts

commit e599c36
Merge: 99277ae 1e56edd
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Wed Jun 24 14:16:22 2020 -0400

    Merge pull request NOAA-EMC#93 from JessicaMeixner-NOAA/bugfix/exiterr

    fix for exiting properly with error for wave prep/init scripts

commit 1e56edd
Author: JessicaMeixner-NOAA <Jessica.Meixner@noaa.gov>
Date:   Wed Jun 24 12:36:53 2020 -0500

    fix for exiting properly with error for wave prep/init scripts

commit 99277ae
Merge: 14dd3c9 4f8d5a5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 23 16:05:16 2020 +0000

    Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b

commit 4f8d5a5
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Jun 23 11:57:26 2020 -0400

    Update README.md

    Remove use/mention of manage_externals until checkout.sh is retired.

commit 14dd3c9
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 23 15:53:11 2020 +0000

    modified:   Externals.cfg and  sorc/checkout.sh to check out model tag GFS.v16.0.7
       and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:

    1) Inline POST Issues NOAA-EMC#136 and $142
       * Update ceiling height calculation for global FV3.
       * add low,middle,high instantaneous cloud fraction
       * add radar reflectivity at model layers 1 and 2 , and radar reflectivities at 1 and 4-km height.
       * fix a bug in initializing DBZI
       * output mixed layer CAPE/CIN
       * remove simulated GOES-12 brightness temperature.
       * change the names of time averaged low/mid/high cloud fractions in grib2 files
         from "TCDC" to "LCDC/MCDC/HCDC", respectively.

    2) Model Issue NOAA-EMC#152
       * update in-line post control files
       * upgrade post library to 8.0.9 for hera and wcoss_dell_p3

commit dd76002
Merge: df89cc8 dd599ea
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Jun 23 11:34:40 2020 -0400

    Merge pull request NOAA-EMC#91 from christopherwharrop-noaa/feature/fix_externals

    Update version of upp in Externals.cfg to be consistent with sorc/che…

commit dd599ea
Author: Christopher Harrop <Christopher.W.Harrop@noaa.gov>
Date:   Tue Jun 23 15:25:08 2020 +0000

    Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh

commit df89cc8
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date:   Fri Jun 19 18:40:26 2020 -0400

    Update config.resources

    Generalize setting of echgres threads to be maximum permitted on given platform instead of explicitly setting echgres threads on every platform.

commit ff8cd28
Merge: 1dd83b8 965ff42
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 18 20:07:59 2020 +0000

    Issue #1:  merge branch 'feature/chgresfcst' at 965ff42 into feature/gfsv16b

commit 965ff42
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 18 20:02:23 2020 +0000

    Issue NOAA-EMC#85:  update DA checkout to point at release/gfsda.v16.0.0

commit 71d7141
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue Jun 16 20:11:33 2020 +0000

    Issue NOAA-EMC#85:  (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env

commit 1dd83b8
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 16:07:45 2020 +0000

    modified:   run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel

commit eb0e3b4
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 14:43:29 2020 +0000

    update  checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8.   1.0.9 still has issues.

commit dfc76f0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Jun 16 13:32:01 2020 +0000

    Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag

commit 7078bb5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 13:22:43 2020 +0000

    modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short.
    modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA

commit 15d5bed
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Jun 15 20:47:47 2020 +0000

    Issue NOAA-EMC#85:  add cfp option to chgresfcst; enable threads with chgresfcst

commit d878269
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Jun 15 16:00:35 2020 +0000

    Issue #1 - update Externals.cfg to match updates to checkout.sh

commit a2bd621
Merge: 22b735d 295cd05
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Jun 15 11:57:14 2020 -0400

    Merge pull request NOAA-EMC#84 from NOAA-EMC/feature/gfsv16b_herawavepost

    Adapting wavepostsbs for running on Hera

commit 295cd05
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date:   Mon Jun 15 11:53:13 2020 -0400

    Update exwave_post_sbs.sh

    Removing obsolete nm variable entries

commit 22b735d
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri Jun 12 20:06:49 2020 +0000

    modified:   checkout.sh to check out upp_gfsv16_relaese.v1.0.9

    output cloud ceiling height and instant total cloud fraction.
    output instant cloud fraction at low/mid/high cloud layer.
    correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
    output radar reflectivity at 1/4 km above ground and model layer 1/2.
    output mixed layer CAPE/CIN.
    Remove simulated GOES-12 brightness temperature from gfs product.
    Add the bug fix of initializing DBZI from Ruiyu.

commit 10ce1d4
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Thu Jun 11 18:42:22 2020 +0000

    Issue #1 - Hotfix to update anaconda module contrib path on Hera

commit 58d1139
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Thu Jun 11 02:44:41 2020 +0000

    Adapting wavepostsbs for running on Hera

commit c330e60
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 21:17:00 2020 +0000

    add checkout.sh to test on Dell

commit 201609b
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 20:51:51 2020 +0000

    Commit changes from debugging addition of chgresfcst on hera

commit 4405a2c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Wed Jun 10 14:36:03 2020 +0000

    Issue #1:  update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base

commit fc3066c
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 14:19:07 2020 +0000

    First draft to add chgresfcst to rocoto workflow

commit 9f2e4ec
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Jun 8 00:34:07 2020 +0000

    Issue #1:  correct typo in scripts/exwave_prep.sh

commit 5a8b8f2
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Jun 8 00:15:31 2020 +0000

    Issue #1:  check for existence of 0p50 and 1p00 pgrb files before attempting to write to HPSS

commit a7306aa
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Sun Jun 7 23:22:53 2020 +0000

    modified:   jobs/rocoto/post.sh
       wait for 5 minutes if forecast history file does not exist before exit

    modified:   modulefiles/module_base.hera
       use GV's temporal build of  netcdfp/4.7.4 and esmflocal/8.0.1.08bs on HERA

    modified:   parm/config/config.base.emc.dyn
       add restart_interval_gfs=0 to config.base. It is used by config.fcst and config.wave

    modified:   parm/config/config.fcst
       -- fix a bug related to setting npe_wav for gfsfcst.
           if [ "$CDUMP" = "gfs" ]; then npe_wav=$npe_wav_gfs ; fi
       -- set  io_layout="4,4" for writing gfs restart files

    modified:   parm/config/config.wave
       set WAVE restart frequency based on restart_interval_gfs (by H. Alves).

commit 1082885
Merge: 968b986 bf5a5c4
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date:   Thu Jun 4 20:26:47 2020 -0400

    Merge pull request NOAA-EMC#83 from NOAA-EMC/feature/gfsv16b_restart

    revive GFS forecast break-point restart capability with IAU turned on

commit bf5a5c4
Merge: b27a01d 968b986
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Thu Jun 4 23:36:52 2020 +0000

    Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b_restart

commit 968b986
Merge: 9b36cfd dc512dd
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date:   Thu Jun 4 19:20:53 2020 +0000

    Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b

commit 9b36cfd
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date:   Thu Jun 4 19:12:56 2020 +0000

    Unify output path in gfs_bfr2gpk.sh

commit 7675368
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date:   Thu Jun 4 19:11:23 2020 +0000

    remove station elevation adjustment to T,Q and evaporation bug fix

commit dc512dd
Merge: a7b25a3 987c32a
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date:   Thu Jun 4 12:55:33 2020 -0400

    Merge pull request NOAA-EMC#82 from NOAA-EMC/feature/gfsv16b_wavehera

    Adjustment to wave workflow for running wave component on Hera

commit 987c32a
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date:   Thu Jun 4 12:08:05 2020 -0400

    Updating checkout to ufs-weather-model GFS.v16.0.5

commit a7b25a3
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Thu Jun 4 14:59:22 2020 +0000

    modified: checkout.sh to check out METplus verification tag verif_global_v1.8.0

commit 0acee67
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Wed Jun 3 20:10:09 2020 +0000

    Issue #1:  remove redundant entry from config.ediag; update checkout.sh to pull GFS v16 DA from github

commit b27a01d
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Wed Jun 3 16:58:29 2020 +0000

    modified:   parm/config/config.fcst
    modified:   scripts/exglobal_fcst_nemsfv3gfs.sh

    GFS forecast restrat capability from a breakpoint is no longer working
    with IAU turned on.  This function has been overhauled to make it more
    general and works for cases with and without IAU

commit ba89548
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date:   Wed Jun 3 09:59:35 2020 -0400

    Update JWAVE_PREP

    Removing lines using for testing presence of files while debugging.

commit bb79d7a
Author: wx20ha <henrique.alves@noaa.gov>
Date:   Wed Jun 3 02:45:33 2020 +0000

    Fixing a few minor bugs in wave_tar.sh after testing on WCOSS

commit 8dc2e25
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Wed Jun 3 01:41:18 2020 +0000

    add new file:   run_gfsmos_master.sh.hera

commit 3393cac
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Thu May 28 00:01:51 2020 +0000

    Correcting minor bug in wave_prn_cur.sh Adjusting indents in exwave_prep.sh Adding defaults for current processing in conif.waveprep.

commit 32c5f29
Merge: 49abb90 e87b5a1
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Wed May 27 17:40:34 2020 +0000

    Merging latest feature/gfsv16b branch into feature/gfsv16b_wavehera

commit 49abb90
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Wed May 27 17:36:12 2020 +0000

    Adding comment indicating how to regenerate cdo interpolation weights.

commit e87b5a1
Author: wx20ha <henrique.alves@noaa.gov>
Date:   Wed May 27 02:01:57 2020 +0000

    JWAVE_PREP updated to use CDO_ROOT defined in config config.waveprep updated to default to WCOSS rtofs operational cdo if no module found wave_prnc_cur.sh bug fixed now provides proper fhr in temp file names exwave_prep.sh adjusted for WCOSS and Hera.

commit 70d7131
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue May 26 20:39:33 2020 +0000

    Issue #1:  remove "_break" from commented out lines in config.anal and config.prep.  "_break" will cause failue if line active

commit 914cb8d
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue May 26 20:37:27 2020 +0000

    Issue #1:  correct typo in parm/config/config.anal

commit 2e12e63
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue May 26 19:18:57 2020 +0000

    Issue #1:  update config.anal logic to point ABIBF at the correct GDA directory

commit 38cd821
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue May 26 18:04:59 2020 +0000

    Issue #1:  update config files

     * parm/config/config.anal - add logic to use correct global_convinfo.txt prior to GFS v15.3 implementation (2020052612)

     * parm/config/config.awips - set NAWIPSGRP to equal NPOSTGRP (config.post)

     * parm/config/config.fcst - add double quotes around CDUMP on levs test to prevent setup_workflow.py runtime error

commit 0dff61f
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon May 25 03:08:27 2020 +0000

    modified:   config.fv3 to reduce tasks assigned to the WAVE component.  70 tasks at C768 is adequate for wave.

commit 20ef779
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Fri May 22 19:52:55 2020 +0000

    Redefining mpmd command for working on Hera with slurm Adapting wave scripts to execute mpmd command on Hera Adjusting wave_prnc_cur.sh for properly catting files on Hera

commit e248236
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Fri May 22 15:23:59 2020 +0000

    modified:   config.fcst to set
    if [ $LEVS = "128" -a $CDUMP = "gdas" ]; then
    ...

    lheatstrg=".false."

commit 96460e6
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Fri May 22 13:02:06 2020 +0000

    Issue #1:  replace "nawips" with "gempak" in hpssarch_gen.sh path to gfs sfc and snd files

commit 7222f84
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Thu May 21 14:09:36 2020 +0000

    modified:   checkout.sh to check out modle tag GFS.v16.0.4. changes include:
           1.  Remove constraints on mixing length and background diffusitivity over inversion layers on land
           2.  Enhance mass flux for deep convection, hence to increase subsidzing warming to reduce
               cold bias in the lower tropospehre
           3. Fix a RRTMg solar radiaiton bug which has impact in SW abosrption in the UV region in
              the upper atmospehre.

commit 4fa08a7
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Wed May 20 01:20:21 2020 +0000

    modified:   HERA.env to add
        export CFP_MP="YES" # For analdiag with SLURM

commit 9f7df9d
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Mon May 18 15:06:19 2020 +0000

    modified:   checkout.sh to check out upp_gfsv16_release.v1.0.8
       1) Add configuration for Orion.
       2) Make fields at isobaric levels have 41 vertical levels for all forecast hours and analysis in pgrb2 dataset.
       3) Remove SPFH at isobaric levels from pgrb2b dataset.

commit 5e4a133
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Fri May 15 13:08:25 2020 +0000

    modified: checkout.sh to check out METplus verification tag verif_global_v1.7.2

commit 4291349
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue May 12 03:05:17 2020 +0000

    modified:   checkout.sh to check out gldas_gfsv16_release.v1.2.0.

commit 0c0614c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Fri May 8 18:29:07 2020 +0000

    Issue #1: change number of tasks for analdiag and ediag to 112 and 56, respectively in config.resources

commit a601acd
Author: emc.glopara <emc.glopara@noaa.gov>
Date:   Fri May 8 04:17:27 2020 +0000

     updated  config.vrfy to point to the fit2obs version that supports reading netcdf history files
        export fitdir="$BASE_GIT/verif/global/Fit2Obs/ncf-vqc/batrun"
        export PREPQFITSH="$fitdir/subfits_hera_slurm"

commit ad86a55
Author: Mallory Row <mallory.row@noaa.gov>
Date:   Wed May 6 15:28:49 2020 +0000

    modified: checkout.sh to check out METplus verification tag verif_global_v1.7.1

commit 20572b5
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Fri May 1 19:08:23 2020 +0000

    Issue #1:  update files written to enkf HPSS tarballs to be consistent with GFS v16 DA updates

commit 20baab7
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Wed Apr 29 18:49:05 2020 +0000

    modified:   checkout.sh to check out model tag GFS.v16.0.3
                In Sfc_diff.f, a bug was introduced when the surface layer scheme was
                updated last time to reduce 2-m temperature cold biases.   The bug only
                has impact over sea-ice points, where momentum and thermal roughness
                are nevertheless very small.

commit af63464
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Apr 28 18:18:44 2020 +0000

    modified:   qctropcy.f by Qingfu Liu
                A bug was found that the history files (syndat_stmcat , syndat_stmcat.scr)
                save the first and last storm ID used. If the FORTRAN code finds that the
                storm ID has been used in the current hurricane season, the code will
                change the storm ID by adding 1 to the original storm ID. The fix is to
                skip the change of the storm ID.
                See also NOAA-EMC#63
lgannoaa pushed a commit to lgannoaa/global-workflow that referenced this pull request Feb 9, 2022
@fossell @WenMeng-NOAA
@kayeekayee @mkavulich @hertneky @DusanJovic-NOAA
Merge DTC_post into develop branch (NOAA-EMC#131)
34c7a61 
* Initialize 'recname' array to blank-fill array and avoid GNU compiling errors

* DTC Sync: Add gtg stub routines to community makefile

* DTC Sync: Use 'INCLUDE mpif.h' instead of 'use mpi' for community portability

* DTC Sync: Declare 'recname' array with blanks to avoid compiling errors with GNU for community

* Temporary hack for community testing until EMC provides fix

* DTC Sync: Add and update initialization routines for NMM binary read. These have not been used operationally for a while. This commit is merely to sync the community and emc code bases

* Link data files in run_unipost scripts for updated CRTM

* First stage in removing WRF dependency: if you copy in the frame/, main/, and external/ directories from a successful WRF build, this version compiles and runs successfully

* Second stage in removing WRF dependency:

Now contains a new directory "wrf_io/" with its own makefile for building the
relevant WRF code. Now you no longer have to pre-build WRF, only run the
configure script to create a configure.wrf file.

To build this version:

 - Copy in the external/, frame/, inc/, main/, Registry/, and tools/ directories from the RAW UNBUILT WRF source code into the new wrf_io/ directory
 - Copy in a configure.wrf file created with that same WRF source code

Should be able to pare down the above list soon, many of them are only
needed for one or two files (or perhaps ultimately none)

This version was tested with the WRF V4.0 Friendly Release NOAA-EMC#3 (git hash e96ef955), but it should work for a wide range of WRF code

* Adding a basic .gitignore file

* AR should not be defined with flags, this can be different for some platforms

* Third stage in removing WRF dependency: configure.wrf file no longer
included in wrf_io makefile

* Adding some makefiles to track their changes

* Updating clean rules to fully clean wrf_io stuff

* Fourth stage in removing WRF dependency: configure.wrf no longer required!

 - Added "wrf_makerules" file to be included in a couple makefiles
   - Contains configure.wrf preamble and postamble, but no
     platform-specific stuff!
 - Still need to copy over WRF directories, *and* properly check out the
   versioned files
 - Modified frame Makefile to remove an unnecessary compilation
   - Hopefully a lot more of this in the future!

* Versioning WRF files in frame/ directory. No longer need to copy this directory in from WRF.

* Fifth stage in removing WRF dependency: frame/ and main/ no longer need
to be copied in to wrf_io/ directory

 - Versioned the necessary files in frame/ from the WRF build.
 - Moved depend.common from main/ to frame/, and versioned it
 - Build libwrflib.a in the wrf_io/ directory instead of wrf_io/main/

* Fix hard-coding of netCDF path. Don't think it was causing problems but hard-coding is bad, mmkay

* Finally started testing other platforms/options. This commit fixes serial compile. Tests now work for options 7 and 8 (gfortran serial and parallel)

 - Link in already existing UPP stub mpi library files for WRF serial build
 - Use already existing "sw_dmparallelflag" switch from configure to
   pass -DSTUBMPI flag for serial builds
 - Remove clog.o file which is only needed for log file buffering, which
   is rarely used in WRF and certainly not supported for UPP.
 - While removing log file buffering, also remove a lot of other
   unsupported CPP ifdefs

* Properly add serial flags. Not sure why the previous version was working...

* Clean out the remnants of the platform-specific wrf_makerules.

* More wrf_makerules cleanup

* Even more wrf_makerules cleanup

* Continuing wrf_makerules cleanup, adding to-do list under version control

* Removing a lot more unnecessary make rules.;

* Remove registry requirement, and version necessary tools/ files

* Adding a bunch of external io source code

* Remove inc/ dependency...very close to removing all WRF dependency!

Move inc files to frame

* Added rest of external libraries, now just testing to go!

* Delete todo

* Get rid of diffwrf, stub-ify wrf_debug

* Remove wrf_debug completely. There, one WRF routine down, seventeen thousand to go...

* Remove ESMF dependence. Lots of line savings here!

* Remove WRF grib1 stuff, really making progress now!

* Remove rest of WRF grib stuff, references to UPP libs from WRF

* Removing fftpack

* Get rid of some "undefined reference" warnings

* Move module_internal_header_util and intio_tags to io_int directory

* Remove module_wrf_error, add some stub routines to compensate

* Remove module_machine

* Remove module_driver_constants and wrf_shutdown

* Tools directory removed!

* Removing ioapi_share directory, redistributing necessary include files

* libwrf no longer necessary

* Remove a whole bunch more residual WRF crap. Mostly unnecessary
and/or unused variables and CPP flags.

* Remove module_wrfsi_static

* Remove WRF links from unipost run script; include necessary lookup
tables in parm/ directory

* Remove unnecessary subroutines from pack_utils

* Delete a whole bunch more unneeded flags and variables

* Remove unnecessary netCDF code

* Remove frame directory, final step before consolidating everything in
its final location

 - Remove some old WRF mpi stub stuff
 - Move pack_utils to io_int directory and build it there
 - Remove a couple more unnecessary makefile items
 - Remove now-defunct frame directory and associated make/clean rules

* Remove a test routine and an unnecessary variable

* A bunch more stuff stripped out.

 - Remove unused variable from io_int.F90
 - Remove unused module module_io_int_read
 - Remove old logic involving 4DVAR
 - Remove a bunch more unneeded/unused makefile variables

* Start moving code to final location: move io_int code to wrf_io top directory

* Continue moving WRF code to its final location: move io_netcdf code to wrf_io top directory

* Move WRF remnants to their final location: src/lib/wrf_io

* Deprecate capability to read WRF binary I/O files

* Remove rest of WRF binary I/O code

 - Remove binary I/O code and makefiles
 - Add a stub "wrf_message" routine to wrf_io.F90 (the netCDF I/O routine)

* Some final touch-ups to this code before rigorous testing.

 - Condense wrf_makerules and roll it into the main wrf_io makefile
 - Remove some unipost source files which are unnecessary without wrf
   binary IO
 - Remove old "Makefile_nowrf" which was from an old partial attempt to
   remove WRF depepndency

* Remove old changes inadvertantly included in removal of WRF dependency

* Update ip libraries to v3.0.0

* Update g2 libraries to v3.1.0

* Update sigio libraries to v2.1.0

* Update g2tmpl libraries to v1.5.0

* update version info/log

* Updating UPP run scripts and Adding V4 Users Guide

* Add GFS config files and update run scripts

* Update V4 UG

* Adding "-w" flag to wrf_io makefile to suppress "Unrecognized directive" warnings

* Update V4.0 UG required libraries section

* Bug fix for nemsiompiio format for FV3GFS processing

* Edit version info for updated nemsio library to v2.2.2 and bug fix uppv4.0.1

* Nemosio fix for serial built from Laurie.

* modifying scripts to use binarynemsiompiio format for FV3

* Modify error message to reflect binarynemsiompiio

* Jira NOAA-EMC#121 Fix typo in Wind Energy Calculation (UPP ID 411) in MDL2AGL.f

* Jira NOAA-EMC#122 Fix error that grabs incorrect EL level for TAUX/TAUY calculation in CALTAU.f

* Jira NOAA-EMC#131 Fix error in pname for updraft helicity in post_avblflds.xml

* Jira NOAA-EMC#132 Fix incorrect grib codes in RQSTFLD.f for wind shear variables

* Jira NOAA-EMC#135 Fix allocation issue for PSFC in Block 2 of SURFCE.f

* Jira NOAA-EMC#136 Fix typo in CALRAD_WCLOUD_newcrtm.f of incorrect iget ID for INSAT 3D select_channels_L call

* Jira NOAA-EMC#139 Remove 10 m POT/SPFH from wrf params - not available for wrf output

* Fix mods for selecting satellite channels in CALRAD_WCLOUD_newcrtm.f and SELECT_CHANNELS.f

* modify makefile to conditionally add mpi stubs for serial builds, instead of always including by default

* Modified GRIB1 Table lyx doc for available satellite channels/levels

* Fix allocation issue for PSFC in Block 2

* Fix mods for selecting satellite channels in CALRAD_WCLOUD_newcrtm

* Fix grib codes in RQSTFLD.f for wind shear variables

* Fix incorrect EL level for TAUX/TAUY calculation

* Fix typo in Wind Energy Calculation (UPP ID 411)

* Fix index for SEVIRI

* Fix index for SEVIRI

* Manual sync of EMC mods to comupp

* Add new routines to makefile

* Update crtm submodule to v2.2.3.1_subset tag to include GOES-R/abi* fix files

* Add abi* coefficient files to run scripts for GOES16 products

* Remove extraneous great than sign

* Comment out #if for testing. PGI and GNU fail with this syntax

* Remove extraneous greater than sign

* Revert MXLVL back to 70. Comment out #if 0 lines.

* Remove nmm-binary read file. No longer supported

* Add community contorl filse and update others

* Chain make commands with "&&" instead of ";", this prevents infinite loop when you call clean script under certain circumstances (like when you forget to check out the crtm submodule)

* Initial progress in new build system:
 - add NCEPLIBS_DIR environment variable into configure.upp
 - use NCEPLIBS_DIR to point to external build of wrfio libraries
 - Remove our build of wrf_io in favor of external build

Compile tested only on Cheyenne, gnu compilers for now

* Missed one change to properly build with external WRF libs

* Removing netCDF discovery dialogue. We should not try to be cute or clever. If the user wants NETCDF they should be able to set a variable or make some links.

* Revamping how we check for JASPER libraries/include files.

Old code incorrectly and unexpectedly defaulted to a (typically) non-existant location for JASPERLIB and JASPERINC.

In keeping with the 'Let the configure script fail'(TM) philosophy I'm trying to instill here,
if the user does not set JASPER or JASPERLIB and JASPERINC variables, unless one of the old default locations exists,
the configure script will fail with an error message. Users can overwrite this message by setting NOGRIB2 environment
variable, but support for GRIB1 will be going away in the not-so-distant future!

* Deleting old deprecated makefiles clogging up src/unipost

* Use consistent JASPER variables between UPP and NCEPlibs. Allow old JASPER variables for back-compatibility

* Use external GRIB2 (g2 and g2tmpl) library builds. Tested on Cheyenne for gnu compilers so far.

* Got unipost to build with all (possible) external libraries

* ndate and copygb also build with external libraries (cheyenne, gnu)

* Since we no longer have a native copy of "params_grib2_tbl_new" file from g2tmpl libraries, we need to link it in from NCEPlibs in the run scripts

* The big merge is here! Moved all the comupp framework to the top level.
This includes the following moves/renames:

comupp/c*                   --> configure|compile|clean
comupp/makefile             --> makefile
comupp/arch/                --> sorc/arch
comupp/src/lib              --> sorc/comlibs (this includes crtm submodule!)
comupp/src/unipost/makefile --> sorc/ncep_post.fd/makefile_dtc

Modifications had to be made to clean/configure/compile scripts, as well
as the community makefiles and Config.pl, to accomodate the new directory structure
and naming schemes. Additionally, there was one divergence point between
the community source code and the ncep source code: GFSPOST was split
into GFSPOST and GFSPOSTSIG.

This version compiles successfully, but the merge is not really finished.
Lots more work before this is considered a complete merge.

* Remove top-level makefile to simplify things

* Removing the last of the external libraries

* Under comupp, moving contents of docs/ parm/ and scripts/ to corresponding top-level directories. A few files in comupp/parm/ remain since they have files in the top-level parm/ that have differences; Tracy is sorting those out.

* Modify clean and compile scripts for proper directory navigation; this was causing the clean script to fail to remove the old configure.upp file

* In clean script, only try to find custom make command if configure.upp exists and is not empty

* Overhaul ncep_post build script: use bash instead of sh, machine name is now a command-line argument

* Using feedback from Tracy, removing or renaming the rest of the files in comupp/parm. Now everything should be in the top-level parm/ directory

* Add top-level .gitignore file so git will not track compilation files such as configuration files, .exe, .o, and .mod

* Updating community runscripts

 - Copy compiled executable to exec/ directory instead of bin/, mirroring
ncep build
 - Update runscripts
   - Replacing references to ndate with `date` utility (thanks to Ka Yee Wong)
   - Removing references to copygb
   - Reference new location of executable in exec/ rather than bin/
   - Reference post_avblflds_comm.xml rather than post_avblflds.xml

Did not update global runscript as this appears to be unsupported anyway

* Should not try to set NETCDF environment variable; if it was not already taken care of in the configure step something has already broken anyway

* Convert clean and compile scripts to bash to match other scripts (and avoid using the non-recommended csh varieties). Also a bit of cleanup of my sloppy handling of directory switching in these scripts

* One more csh->bash change: need to use !-s test instead of -z

* A few more tidying changes for clean: restore use of printf to get newlines, echo all the clean -a remove statements

* Allow ncep_post compilation from ./compile script by providing argument

* Removing the last of the comupp remnants

* Fix dumb mistake: need to actually create the exec directory we want to use!

* Add Darwin, gnu stanza to configure.defaults

* Accidentally removed last NULL stanza from configure.defaults; this could cause weird failures

* Prepping configure architecture to allow individual locations of NCEP libs to be specified

 - Rather than just setting NCEPLIB_DIR in configure.upp, now use that environment variable
   to set the library and include files in configure.upp
 - Remove old, obsolete definition of WRF_DIR in configure.upp

* One last overhaul of configure system

 - Add framework (but not functionality) for NCEP libraries to be linked individually
 - Handle the inclusion of NCEPLIBLIB and NCEPLIBINC in configure script rather than Config.pl
   - This will allow easier handling of multiple library and include paths once the full functionality is added
 - Gracefully handle unsupported platforms; if OS/MACH combo is not available don't even use Config.pl

* Forgot to remove some debug prints from configure script

* Continuing overhaul of configure system to allow linking of libraries individually

 - Set up array of required directories, and remove directories as they are detected.
   If all required directories are found with the appropriate files, NCEPLIBS is not required
   - This is only completed for library files, not other required files
 - Fix sed issues that wouldn't substitute properly for strings with spaces in them
 - Add in an echo line that somehow got removed

* One final intermediate commit on new config system before the big finale

 - Forgot to add exit statements to failure conditions when library files are missing
 - Accidentally left some important lines commented
 - Fix some indentation

* Configure system now fully mix-and-match configurable for NCEP libraries

 - All include files now included as well. I'm kind of shocked at how few include files are actually necessary...
 - Use an array for directories where multiple files from the same library are needed
 - Remove some old comments and echo statements

* A few miscellaneous improvements to configure script

 - Explicitly reference bash rather than sh in shebang
 - A few more detailed comments
 - Remove unnecessary assignment of input argument

* More portable solution for GRIB2 table: use already existing params_grib2_tbl_new in top-level parm directory

* Fix locations of params_grib2_tbl_new and crtm coefficient files

* Adding version numbers and precision info to library names

Since UPP specifically needs 4-byte reals in its libraries we should specify this in the library names rather than leaving it ambiguous
This also follows standard EMC naming conventions so ideally we can use libraries from any source
Furthermore, if a different library version is desired, it can be specified using an environment variable at configure time

* Remove jasper requirement; this is obsolete since it is only needed for compiling GRIB2 libraries

* Add mods from develop

* Update dtc makefile to compile new routines

* Add check to configure script to ensure CRTM submodule has been checked out

* fix for filling a handful of 2d variables currently causing a divide-by-zero error when run in debug mode.
Currently filled with 'k' which fills with zeros
Needs to fill with 'll' which is what's being filled within the larger loop and different index value than 'k'

* Fix ID index in WRF-CHEM SMOKE block, which currently causes failed build in debug mode

* Modification to makefile for compiling new routines added from develop

* Remove blank line from params_grib2_tbl_new that causes memory fault for certain cases ran with GNU

* Add the flat file name (postxconfig-NT.txt) to fix the itag bug for GFS case.

* Change MXLVL back to 70 for COMMCODE in RQSTFLD.F

* Add if-statement for imp_physics when calling GSD VIS (dependency is that imp_physics=28)

* Fix the way that the parameter 'rg' is read in, should be read in from params.F

* Temporarily restoring the ability to run build_ncep_post.sh without an argument.

* Turn off 2 fields not available for ARW, which were causing seg faults during run time

* Initialize n_clouds=0 and print msg, when not defined for certain mp_physics

* 1) Initialize variables as zero that were not initialized for ARW, causing failures in debug mode
2) Comment out 2 lines in INITPOST.F that were causing failures in debug mode

* Add v4.1-beta UG

* Add new HWRF routine

* Allocate/deallocate HWRF variables

* Add HWRF variables

* Add cd10 and ch10 code for HWRF

* Add new HWRF vars to rqstflds

* Add new HWRF routine to community makefile

* Add NMM model for HWRF

* WRF-NMM has no data for certain fields at the boundary. Add code to mask out the outermost rows and columns if maptype==203

* Correct typo made when adding support for advected Ferrier-Aligo microphysics

* Add Himawari sensors

* Removing serial option for this release

* Better solution to avoid changing option numbering: if users select a serial option, output an error message

* Updated submodule to new tag v2.2.3.2_subset to include Himawari files

* Add Himwari sensors to list

* Fix typo in grib tables

* Change name of UPPV4.1 users guide

* Add link to Himawari fix files in run scripts

* Switch to updated Himawari fix files for testing

* Updates to v4.1 UG

* Fix Out of Bound Exception in GFSPOST.F (NOAA-EMC#100)

* Fix out-of-bound error in tpause routine in GFSPOST.F

* Fix use of undefined variables.

* Updating CRTM submodule tag to include Himawari fix file

* Added the FV3 netcdf option and updated the netcdf format check for FV3 option.

* Update run_unipost

* Update run_unipostandgempak

* Update run_unipostandgrads

* Update parameter files and remove some duplicate parameter files

* Update scripts with bug fix for FV3GFS data and minor file link corrections

* Minor updates to fields file info

* Add GOES 16/17 to GRIB2 table, update release tag in UG

* remove redundant line

* Add extra space character to obslist to fit himarwari

* Add Himawari-8 for grib2

* Link Himawari-8 coefficient files in run_unipost script

* Add new HWRF routine to EMC makefile

* Changed HWRF's CD/CH exchange coeff UPP IDs to 922 and 923 to avoid conflict with Himawari number set

* Set n_clouds to zero to avoid crashes. This got removed in merge somehow

* Remove old lyx doc files

* Remove old run scripts

* Initialize aerosol coeffs and remove mp check to avoid failures

* Add Himawari coefficients to list of crtm files to link

* Modify UPP IDs for Himawari fields to avoid conflict with other model output

* Increase MXFLDS to accommodate new Himawari IDs

* Fix index for Himwarai channel 7

* Add Orion and Odin back into build script

* Change lowercase o to uppercase O for orion

* Add Orion and Odin to list of machines

* Save DTC grib2 table and restore develop branch version to be default

Co-authored-by: Kate.Fossell <Kate.Fossell@noaa.gov>
Co-authored-by: Wen Meng <wen.meng@noaa.gov>
Co-authored-by: Tracy <tracy.hertneky@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <michael.kavulich@noaa.gov>
Co-authored-by: kayee <kayee.wong@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Tracy <hertneky@ucar.edu>
Co-authored-by: Kate Fossell <you@example.com>
Co-authored-by: Dusan Jovic <48258889+DusanJovic-NOAA@users.noreply.github.com>
lgannoaa pushed a commit to lgannoaa/global-workflow that referenced this pull request Feb 9, 2022
@WenMeng-NOAA
Post ceilling (NOAA-EMC#136)
e8f0f2e 
* Add the changes of outputing ceiling height for global FV3.

* Output low,middle,high cloud fraction; radar reflectivity at model layer 1, 2; 1 and 4 km radar reflectivity.

* Add the bug fix of initializing DBZI from Ruiyu.

* 1)correct time averaged cloud fraction at low/mid/high cloud layer grib2 name from "TCDC" to "LCDC/MCDC/HCDC"; 2)output mixed layer CAPE/CIN; 3)remove simulated GOES-12 brightness temperature.

* Clean up v8.0.0-hera.
zhanglikate pushed a commit to zhanglikate/global-workflow that referenced this pull request Oct 6, 2022
@junwang-noaa
Orion post maintenance fix (NOAA-EMC#136)
82b56ac 
* update orion slurm job card

* udpate orion log files

* update hera log files

Co-authored-by: Jun Wang <junwang-noaa@users.noreply.github.com>
jderrico-noaa pushed a commit to NOAA-GSL/global-workflow that referenced this pull request Jan 29, 2024
@jkhender
- merge 23Jun20 port2orion branch, ed6b279, into gsd-ccpp-jet
ea1aa3b 
- updated INFO file

Squashed commit of the following:

commit be717ce
Merge: df8dc52 99277ae
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Jun 23 16:20:51 2020 +0000

    Issue #5 - Sync merge branch 'feature/gfsv16b' into port2orion

    * feature/gfsv16b:
      Update README.md
      modified:   Externals.cfg and  sorc/checkout.sh to check out model tag GFS.v16.0.7    and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:
      Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh

commit 99277ae
Merge: 14dd3c9 4f8d5a5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 23 16:05:16 2020 +0000

    Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b

commit 4f8d5a5
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Jun 23 11:57:26 2020 -0400

    Update README.md

    Remove use/mention of manage_externals until checkout.sh is retired.

commit 14dd3c9
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 23 15:53:11 2020 +0000

    modified:   Externals.cfg and  sorc/checkout.sh to check out model tag GFS.v16.0.7
       and UPP tag upp_gfsv16_release.v1.0.9.  Changes include:

    1) Inline POST Issues NOAA-EMC#136 and $142
       * Update ceiling height calculation for global FV3.
       * add low,middle,high instantaneous cloud fraction
       * add radar reflectivity at model layers 1 and 2 , and radar reflectivities at 1 and 4-km height.
       * fix a bug in initializing DBZI
       * output mixed layer CAPE/CIN
       * remove simulated GOES-12 brightness temperature.
       * change the names of time averaged low/mid/high cloud fractions in grib2 files
         from "TCDC" to "LCDC/MCDC/HCDC", respectively.

    2) Model Issue NOAA-EMC#152
       * update in-line post control files
       * upgrade post library to 8.0.9 for hera and wcoss_dell_p3

commit dd76002
Merge: df89cc8 dd599ea
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Tue Jun 23 11:34:40 2020 -0400

    Merge pull request NOAA-EMC#91 from christopherwharrop-noaa/feature/fix_externals

    Update version of upp in Externals.cfg to be consistent with sorc/che…

commit dd599ea
Author: Christopher Harrop <Christopher.W.Harrop@noaa.gov>
Date:   Tue Jun 23 15:25:08 2020 +0000

    Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh

commit df8dc52
Merge: ff46607 df89cc8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Jun 22 14:41:17 2020 +0000

    Issue #5 - Sync merge branch 'feature/gfsv16b' into port2orion

    * feature/gfsv16b:
      Update config.resources
      Issue NOAA-EMC#85:  update DA checkout to point at release/gfsda.v16.0.0
      Issue NOAA-EMC#85:  (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env
      Issue NOAA-EMC#85:  add cfp option to chgresfcst; enable threads with chgresfcst
      add checkout.sh to test on Dell
      Commit changes from debugging addition of chgresfcst on hera
      First draft to add chgresfcst to rocoto workflow

commit df89cc8
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date:   Fri Jun 19 18:40:26 2020 -0400

    Update config.resources

    Generalize setting of echgres threads to be maximum permitted on given platform instead of explicitly setting echgres threads on every platform.

commit ff8cd28
Merge: 1dd83b8 965ff42
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 18 20:07:59 2020 +0000

    Issue #1:  merge branch 'feature/chgresfcst' at 965ff42 into feature/gfsv16b

commit 965ff42
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Thu Jun 18 20:02:23 2020 +0000

    Issue NOAA-EMC#85:  update DA checkout to point at release/gfsda.v16.0.0

commit ff46607
Merge: ed6b279 1dd83b8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Wed Jun 17 17:23:44 2020 +0000

    Issue #5 - Sync merge branch 'feature/gfsv16b' into port2orion

    * feature/gfsv16b:
      modified:   run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel
      update  checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8.   1.0.9 still has issues.
      Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag
      modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short. modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA
      Issue #1 - update Externals.cfg to match updates to checkout.sh
      Update exwave_post_sbs.sh
      Adapting wavepostsbs for running on Hera

commit 71d7141
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Tue Jun 16 20:11:33 2020 +0000

    Issue NOAA-EMC#85:  (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env

commit 1dd83b8
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 16:07:45 2020 +0000

    modified:   run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel

commit eb0e3b4
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 14:43:29 2020 +0000

    update  checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8.   1.0.9 still has issues.

commit dfc76f0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Tue Jun 16 13:32:01 2020 +0000

    Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag

commit 7078bb5
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date:   Tue Jun 16 13:22:43 2020 +0000

    modified:   scripts/run_gfsmos_master.sh.dell to set default verification type o short.
    modified:   sorc/checkout.sh  updated to model tag GFS.v16.0.6 to fix contrib issue on HERA

commit 15d5bed
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date:   Mon Jun 15 20:47:47 2020 +0000

    Issue NOAA-EMC#85:  add cfp option to chgresfcst; enable threads with chgresfcst

commit d878269
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date:   Mon Jun 15 16:00:35 2020 +0000

    Issue #1 - update Externals.cfg to match updates to checkout.sh

commit a2bd621
Merge: 22b735d 295cd05
Author: Kate Friedman <kate.friedman@noaa.gov>
Date:   Mon Jun 15 11:57:14 2020 -0400

    Merge pull request NOAA-EMC#84 from NOAA-EMC/feature/gfsv16b_herawavepost

    Adapting wavepostsbs for running on Hera

commit 295cd05
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date:   Mon Jun 15 11:53:13 2020 -0400

    Update exwave_post_sbs.sh

    Removing obsolete nm variable entries

commit 58d1139
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date:   Thu Jun 11 02:44:41 2020 +0000

    Adapting wavepostsbs for running on Hera

commit c330e60
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 21:17:00 2020 +0000

    add checkout.sh to test on Dell

commit 201609b
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 20:51:51 2020 +0000

    Commit changes from debugging addition of chgresfcst on hera

commit fc3066c
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date:   Wed Jun 10 14:19:07 2020 +0000

    First draft to add chgresfcst to rocoto workflow
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