Splitting post jobs for waves #124
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as well as extra error messages
GEFS branch to add extra error checking
so that parallels will be reproducible also deleted unused variable
Adding new wavepostbndpnt and wavepostpnt jobs
…/global-workflow into feature/gfsv16b-wave
Feature/gfsv16b wave
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
|
I will be reviewing the changes and testing them against v16rt2 on WCOSS-dev before approving. |
…6b-wave Conflicts: parm/config/config.resources ush/rocoto/setup_workflow.py ush/rocoto/setup_workflow_fcstonly.py
yangfanglin
reviewed
Sep 2, 2020
…ture/gfsv16b-wave * upstream/feature/gfsv16b-wave: adding pnt jobs as seperate jobs for env moving definitions of wavempexec and wave_mpmd from jobs to env lowering the resource requirement for wave prep job update module for cdo updates to resources for wave jobs Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py cleaning up wave point post scripts rename wave post script remove gridded so can rename updates to boundary point Remove extra space from line Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes fix typos updating WCOSS work around for CDO, CDO_ROOT is missing from module file adding module use for cdo module on wcoss dell updates for new weights file and adding cdo module for wave prep Adding new wavepostbndpnt and wavepostpnt jobs updating wave post scripts for restructured format updates to JJOBs for wave post point for new structure changing exit 0 to exit number for FATAL errors in ice prep for waves updating error message and exit if there is no current input file update WAVE_PREP so that currents do not check for previous 24 hour so that parallels will be reproducible also deleted unused variable renaming wave job and scripts update jobs for waves Issue NOAA-EMC#94 - pull in two fixes for wave job setup in free-forecast mode updates for wave scripts to split them, also added updates from GEFS branch to add extra error checking updates from gefs post workflow: updates for re-run case as well as extra error messages
as a forecast instead of analysis
as a forecast instead of analysis
…ture/gfsv16b-splitwavepost
…epost Sync with feature/gfsv16b and small updates to split wave post changes
KateFriedman-NOAA
approved these changes
Sep 11, 2020
There was a problem hiding this comment.
Ran updates successfully in test on Mars. Jessica checked output and confirmed jobs ran correctly. Also tested gempak updates from Roberto in the same test and he confirmed those updates ran correctly and that folks at OPC will now examine gempak output once the updates are in the real-time parallel.
jkhender
added a commit
to jkhender/global-workflow
that referenced
this pull request
Sep 17, 2020
Squashed commit of the following:
commit ce1c78255f4bf8f40c2f116547062c7f1b3832c5
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 15 10:25:37 2020 +0000
Issue #1: add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix)
commit 67b33dd15633345e0fd59dd37728c26b36d4c0b3
Merge: c33869da 586fe6ce
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Sep 14 10:34:39 2020 -0400
Merge pull request #130 from JessicaMeixner-NOAA/bugfix/rtofs
Bugfix for rtofs
commit 586fe6ce19c5fc281dec16be3347d0311f3e99ce
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 14 14:29:01 2020 +0000
adding the line to go back a day for RTOFS for the if not NCO
section because RTOFS will not be available until 06 cycle
commit c33869dab2704396ea6e569dcd202a2b9866827a
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon Sep 14 02:34:08 2020 +0000
deleted relocate_mv_nvortex.fd since storm relocation is no longer needed.
modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex
commit 4320bf9fd55757df79b63ed15c2041b1acd0e604
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Sat Sep 12 00:05:38 2020 +0000
Issue #1: correct DA typos in sorc/link_fv3gfs.sh
commit 674cd841a7be3a2a9c772cd455ab980195ea9fcc
Merge: 46c2404e ad1a9d90
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 15:06:36 2020 -0400
Merge pull request #124 from JessicaMeixner-NOAA/feature/gfsv16b-wave
Splitting post jobs for waves
commit ad1a9d9044e89b75ec82bb201e35005552d3d177
Merge: 986f8f0b fd687727
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Fri Sep 11 14:01:35 2020 -0400
Merge pull request #4 from KateFriedman-NOAA/feature/gfsv16b-splitwavepost
Sync with feature/gfsv16b and small updates to split wave post changes
commit fd687727b2df80f81fabc41b94f808b74e68783c
Merge: 986f8f0b fc60e895
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 17:52:30 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-splitwavepost
commit fc60e895dea1c123a4b8e02b50df0d0cfa43f77f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 17:45:03 2020 +0000
Increase walltime for new wavepost jobs
commit e0dd1097de2c335400a546137569886a838c46ba
Merge: 0844b004 46c2404e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 14:20:15 2020 +0000
Merge branch 'feature/gfsv16b' into feature/gfsv16b-wave
commit 46c2404eba485d08e381ef81ebd5ac10c5ad605f
Merge: c5546570 9d9b79c9
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 10:15:49 2020 -0400
Merge pull request #128 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit c554657023d82ac934b481593e55406c45157932
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Sep 11 13:59:51 2020 +0000
Issue #1: update name of DA jobs and scripts in accordance with WCOSS Implementation Standards
commit 9d9b79c911add71065b0999821772d026609ad62
Merge: cb78f7b8 d3946f90
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Fri Sep 11 13:48:19 2020 +0000
Issue #94 solving a conflict
commit cb78f7b839a7b5fd5082f39592e3b450ce059e82
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Fri Sep 11 13:21:41 2020 +0000
Issue #94 add waves-prdgen, ICE->ICEC, Sleep in gempak script
commit d3946f9006f433e0a6b2f459aeaa7fd8bf800aff
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 8 14:46:39 2020 +0000
Issue #1: clean up DA sections of link_fv3gfs.sh
commit 986f8f0b9858f61d32d337a67efa966a7948aa94
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit 0844b0043c937925c5ad76b4fad03308483d49b3
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit 64409b1e9e976b75afd8a3548e7023dce534c4ae
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 3 15:42:23 2020 +0000
Adding missing space to if-block in env files to resolve runtime failure
commit 0485442f5876b82de73c47429d3a70f58f0aa263
Merge: 26c84b3c 2006bbcb
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 3 15:37:50 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-wave
* upstream/feature/gfsv16b-wave:
adding pnt jobs as seperate jobs for env
moving definitions of wavempexec and wave_mpmd from jobs to env
lowering the resource requirement for wave prep job
update module for cdo
updates to resources for wave jobs
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
cleaning up wave point post scripts
rename wave post script
remove gridded so can rename
updates to boundary point
Remove extra space from line
Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes
fix typos
updating WCOSS work around for CDO, CDO_ROOT is missing from module file
adding module use for cdo module on wcoss dell
updates for new weights file and adding cdo module for wave prep
Adding new wavepostbndpnt and wavepostpnt jobs
updating wave post scripts for restructured format
updates to JJOBs for wave post point for new structure
changing exit 0 to exit number for FATAL errors in ice prep for waves
updating error message and exit if there is no current input file
update WAVE_PREP so that currents do not check for previous 24 hour so that parallels will be reproducible also deleted unused variable
renaming wave job and scripts
update jobs for waves
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
updates for wave scripts to split them, also added updates from GEFS branch to add extra error checking
updates from gefs post workflow: updates for re-run case as well as extra error messages
commit 26c84b3ca81dec965ab31d00409b537f61174dc1
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Sep 3 14:06:29 2020 +0000
Issue #1: remove pgrb2b.0p25 dependency from gfsawips in setup_workflow.py
commit 609e157c2477b662b55bbf3d53999cdd30856bc8
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 20:35:28 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.4 and remove HOURLY variable from WAFS configs
commit b0bebad6258bd81c0b0c89b559a04d9b059c838e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 20:08:01 2020 +0000
Issue #1 - change wavegempak and waveawipsgridded dependency to match waveawipsbulls and start when wavepostsbs is complete
commit 084c89e3d562f8c9977eaa17624646be388f7854
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Sep 2 19:58:37 2020 +0000
Issue #1: set n_sponge=42 in gfs section of config.fcst
commit 2006bbcb1e54e3cd5ae0ff2826b6d0b211c1d013
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 19:22:38 2020 +0000
adding pnt jobs as seperate jobs for env
commit c61cd59488b64ead77e13b2eb5faeb383d052ea0
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 19:02:21 2020 +0000
moving definitions of wavempexec and wave_mpmd from jobs to env
commit 68ed2d670ebe25713554f2165a0bbc7c35fb5030
Merge: 4e7975d2 70abda26
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 17:45:26 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave
Conflicts:
parm/config/config.resources
ush/rocoto/setup_workflow.py
ush/rocoto/setup_workflow_fcstonly.py
commit 70abda260dc9ab47533d25cd570dd055c4644123
Merge: 0a31d568 52e987ac
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 10:28:22 2020 -0400
Merge pull request #122 from KateFriedman-NOAA/feature/gfsv16b_wavedown
Add downstream wave jobs to GFSv16
commit 0a31d568bdacd0fb2d8bc6e1fddb09d2c72d014c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 14:09:57 2020 +0000
Remove unneeded settings from config.post
commit 52e987ac67477932e5b034321cf52f1cc756081c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 13:05:42 2020 +0000
Added null DBNROOT to wave awips configs
commit b3c7b7379a6ebb53b4d4533b894b1bf36df3c2fd
Merge: 074f2782 add6ea0b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 13:02:41 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b_wavedown
commit 4e7975d265857e4e634e0c7352f6ed2de1a99336
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 1 22:45:05 2020 +0000
lowering the resource requirement for wave prep job
commit add6ea0bae2c56bba2e3d76460771095b98786b1
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 1 19:40:10 2020 +0000
Issue #1: rename enkf_chgres_recenter executables in accordance with WCOSS Implementation Standards
commit 8a7e8d9944b8727da91bfb28bbfe44958f0aeb65
Merge: 4c9978a8 595edcfa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 15:00:08 2020 -0400
Merge pull request #121 from KateFriedman-NOAA/feature/gfsv16b-wafs
Adding WAFS jobs to GFSv16
commit 4c9978a8b0a98527d7c78a3da0a0a55e39cefed0
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 18:48:44 2020 +0000
modified: checkout.sh to use gldas_gfsv16_release.v1.6.0
commit 595edcfaaf1372889c8d569e01ec4dfefb51c469
Merge: 8a593c8d 06bda7de
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 17:30:08 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit ada0fb3155a57bdba074c84e1ab3d73eabb0e2f4
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 1 17:18:27 2020 +0000
update module for cdo
commit 074f2782438471740453e356b856a4756e59c858
Merge: a1a3d69b 8a593c8d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:30:56 2020 +0000
Sync with WAFS branch
commit a1a3d69ba40564f550053b99b4328ba41c7cc45d
Merge: 249b6ef7 06bda7de
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:22:20 2020 +0000
Sync merge with feature/gfsv16b
commit 8a593c8df03d8a879c5488fbd671fef94f5d867d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:09:49 2020 +0000
Update to WAFS tag and added SENDDBN_NTC to both base configs
commit 5270ed831c0b3c428736cbd8a789a4d3cfdcc0fe
Merge: 95ec3329 eabda84f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:03:53 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit 06bda7dec74831951034b72c83abbb2d994ee539
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 14:02:44 2020 +0000
modified: link_fv3gfs.sh to not link or copy
0readme fix_chem fix_fv3 fix_sfc_climo
which are not used by GFS.v16 and are of large size
commit eabda84f97c11251f672d95bb604ad0c50e8da18
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 13:48:11 2020 +0000
modified: link_fv3gfs.sh to remove chgres_cube.fd and chgres_cube.fd in sorc/link_fv3gfs.sh
commit 223492bf6c56c0491c0034dc1d4a0a3e6e97a607
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 03:59:53 2020 +0000
modified: link_fv3gfs.sh to allow "fix" directories to be removed before rerunning
link_fv3gfs.sh for RUN_ENVIR=nco case
commit 95ec3329e72a54b0dabdccdecd467972c4914dcd
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 18:57:32 2020 +0000
Added WAFS jobs to free-forecast mode, updates for extending WAFS to fh120, and two bug fixes in link_fv3gfs.sh and hpssarch_gen.sh
commit 6f660d9a9a5758f3d74f87f170a95a26ca0c0e6a
Merge: 8da41916 3282a899
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 17:58:55 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit 3282a8996ab0510699932a53897b87730b2cc492
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 17:47:37 2020 +0000
Renamed global-workflow-owned ex-scripts to remove ecf extension and updated other scripts which call those ex-scripts
commit 9cde3a41f34d0c2618e8fb06ff1276cec5378ef5
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 18:46:57 2020 +0000
Remove UFS_UTILS ecf extensions
commit f7a92dbc1c3ad822d3b8e567967e91384631288d
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Aug 28 18:09:26 2020 +0000
Issue #1: (1) update earc.sh directory removal to be consistent with arch.sh, (2) update config files to be consistent with EMC real-time GFS v16 parallel
commit 249b6ef761fb41b5d102b282fccedeb827192dff
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:52:54 2020 +0000
Remove ecf script name extensions from downstream wave scripts
commit 004a29f39204314159d2cbd028950cfaba07cf33
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:50:03 2020 +0000
Add new downstream wave jobs to workflow
commit 8da4191644ff55f46e8f394e4e1d29641d3c117c
Merge: 8f97726a 6319bda4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:42:11 2020 +0000
Sync merge with feature/gfsv16b
commit 8f97726a4170d56dcaf6732ae141fae9aaebfd8d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:39:50 2020 +0000
Add new downstream WAFS jobs
commit 6319bda47548873acb8859d9a47d2ac6a6ef4c67
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 15:41:55 2020 +0000
Issue #1 - update GLDAS and UPP workflow files for removal of ecf script extension
commit 8f7615c76f76611d748246a80d9286de7c4d3295
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Aug 27 20:53:25 2020 +0000
Issue #1: remove ".ecf" suffix from DA scripts referenced in sorc/link_fv3gfs.sh
commit af754d1fa0aa4a521fcd5b4fc04eaa88d475dbff
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Aug 27 20:47:14 2020 +0000
Issue #1: remove ".ecf" extension from DA exscripts (as per WCOSS Implementation Standards) referenced from parm/config files
commit a6e91b48b7024c83491fd1f93c6d7df8e3301af5
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 27 20:25:45 2020 +0000
updates to resources for wave jobs
commit f0b9a98973b7983eadab51c7009723b5d0b4a564
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Aug 26 23:04:02 2020 +0000
Issue #1: update name of DA enkf chgres script in config.echgres
commit 01f33c498bf0b5c0d48486cd04dab9c93c721906
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Aug 26 20:58:29 2020 +0000
Issue #1: Rename DA enkf chgres job and script as per EE2 guidance
commit 7d3f37819aba17dc794d10f7453061802779b435
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 18:35:59 2020 +0000
Workflow changes for wave gempak and awips downstream jobs
commit 485632eafe37c1866011af1bd0a601fb1c7adc4c
Merge: 2946baad e191fd4b
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Wed Aug 26 11:49:40 2020 -0400
Merge pull request #3 from KateFriedman-NOAA/feature/gfsv16b-wave
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
commit e191fd4bb87af787feab486bf072fe4dce7f12f4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 15:47:49 2020 +0000
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
commit 4641a72e1ced493c7ec5d837a3093908e388b5df
Merge: a1b08c92 25ae4899
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 11:33:23 2020 -0400
Merge pull request #119 from GeorgeGayno-NOAA/feature/gfsv16b
enkf_chgres_recenter_nc.fd - Remove hard-coded vertical levels.
commit 25ae4899cee3dc3aeff1e36f0ac1d0b0773ca2f9
Author: George Gayno <George.Gayno@noaa.gov>
Date: Wed Aug 26 14:25:36 2020 +0000
feature/gfsv16b: Add Cory's updates to build 'enkf_chgres_recenter_nc'
on Cray.
Issue #102.
commit 2946baad88d908b32793f542cab42f0c89adf009
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Aug 26 13:44:06 2020 +0000
cleaning up wave point post scripts
commit 3590e9a45e2b13b22ff3c3d4827907ddcf55eebf
Merge: 727c3ffd a1b08c92
Author: George Gayno <George.Gayno@noaa.gov>
Date: Tue Aug 25 20:20:17 2020 +0000
feature/gfsv16b: Merge updates from authoratative feature/gfsv16b
branch.
Issue #112.
commit a1b08c92892278453f25c2530f8b8fb968af9a34
Merge: 45ad029b ce3816d3
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 16:01:57 2020 -0400
Merge pull request #116 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit ce3816d3e88b8d2de7472a214e66cb54aceca9a6
Merge: b0c91610 45ad029b
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Tue Aug 25 19:55:53 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Issue #94 Adding prdgen for waves
commit 90181842fbb7a22479f12d3a67bcdc8fa4b8f669
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:02:22 2020 +0000
rename wave post script
commit 1f15be0a8207d3117200bcc145a5ae66b7445ec3
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:01:41 2020 +0000
remove gridded so can rename
commit 1fc5b368fe0cd438e2202b62de7753b7efed7af6
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:00:20 2020 +0000
updates to boundary point
commit f0e3ae5c2cd441673a4a670618e87f050a12c9e9
Merge: 98d6c163 b74b21e7
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Tue Aug 25 14:15:57 2020 -0400
Merge pull request #2 from KateFriedman-NOAA/feature/gfsv16b-wave
Feature/gfsv16b wave
commit b74b21e71edbb62207ccfcafe4c6ed5b6d301cfe
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 18:14:15 2020 +0000
Remove extra space from line
commit 25e2cc4596213b39d2a3dc3ee8afda4a86e10d38
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 18:12:04 2020 +0000
Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes
commit 45ad029bad4367961e5eff987f27226b0ac78d5a
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Aug 25 13:40:45 2020 +0000
Issue #1: several minor changes
* Externals.cfg and sorc/checkout.sh: update to tag verif_global_v1.10.1
* jobs/rocoto/arch.sh: update ARCDIR cp to use new path to tracker output
* scripts/run_gfsmos_master.sh.dell: remove module purge from mos driver script
commit 0a85a36ef0784bebf96d2f97c24dd4c642ac23f1
Merge: d5861551 5190efb1
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 09:20:42 2020 -0400
Merge pull request #118 from GuangPingLou-NOAA/feature/gfsv16b
Issue #117 Modufy Bufr station Hilo's grid point representation
commit 5190efb119c6eec6a7c67d90327dee4666307541
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Tue Aug 25 12:30:45 2020 +0000
Issue #117 Modufy Bufr station Hilo's grid point representation
commit 98d6c16336e5b0a3241174c54b7631667a4f919d
Merge: 0eacf5e2 32bd57ef
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 22:27:39 2020 +0000
Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave
commit 0eacf5e21c3149d2d922b4c2495e48fb2355e639
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 22:27:28 2020 +0000
fix typos
commit b0c9161061302ccf4b890cceabe5b4eaecb67e61
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 22:25:05 2020 +0000
Issue #94 changing native by interpolated grids for gempak
commit 8a68d3c6d6996f389609d5961f32f0db116797d1
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 21:47:44 2020 +0000
Issue #94 removing the load of modulefiles and sending set.pdy to j-jobs
commit 32bd57ef2b390dbe73a744188a40ca4c42c306fe
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 20:35:39 2020 +0000
updating WCOSS work around for CDO, CDO_ROOT is missing from module file
commit a2d06bb0bf82ee48899cb26ea9abf2331b543107
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 18:55:02 2020 +0000
adding module use for cdo module on wcoss dell
commit e5c9f037bd82ed4bc72cf11241d7c053160ff5b9
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 18:29:36 2020 +0000
updates for new weights file and adding cdo module for wave prep
commit 96655fbe5b5daf130d4a9a458ce47059c047376a
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 16:56:37 2020 +0000
Issue #94 removing modulefiles load from j-jobs
commit 7f9344f777075ce3220d9a9fccba74c07e4f40e2
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 14:32:26 2020 +0000
Issue #94 Solving reviewers comments
commit c9598a3207bb06cbd7d2619d97f723f6511da9a4
Merge: bf97710b 92a2a43d
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Mon Aug 24 10:12:43 2020 -0400
Merge pull request #1 from KateFriedman-NOAA/feature/gfsv16b-wave
Adding new wavepostbndpnt and wavepostpnt jobs
commit 92a2a43db190982944b4166b929a791a1b0b0750
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 24 14:06:23 2020 +0000
Adding new wavepostbndpnt and wavepostpnt jobs
commit bf97710bece30195679740b0de2b32e0adc6c3c6
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Aug 21 00:20:56 2020 +0000
updating wave post scripts for restructured format
commit a914521cec478667191b365e2a2a62e3553e0ff7
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 23:52:47 2020 +0000
updates to JJOBs for wave post point for new structure
commit 1f195f8d432072f4e4f66406ea6b09256a185d2b
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 15:20:28 2020 +0000
changing exit 0 to exit number for FATAL errors in ice prep for waves
commit f836a7869dbb88badd93fcd9d08314284eee4f96
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 15:17:28 2020 +0000
updating error message and exit if there is no current
input file
commit 529cc3692f4fc003295584e761279be3c9405b68
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:50:50 2020 +0000
update WAVE_PREP so that currents do not check for previous 24 hour
so that parallels will be reproducible
also deleted unused variable
commit 57c4258ba73778fe95118ebfae98c4bbf012ae37
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:09:22 2020 +0000
renaming wave job and scripts
commit 1626cb2f90bfea5663f198cfc2ac2916a9200e1a
Merge: da292216 d5861551
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:02:54 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-splitwavepost
commit da2922163922f4b4b14dba78dba36e9eced3a2c5
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 13:50:15 2020 +0000
update jobs for waves
commit a1c456f267ddf701aa47ad33fd231a2f1ae0bf99
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 20:09:47 2020 +0000
Issue #94 renaming the J-jobs
commit 036617c8a9b5da765b82c276f7b087aa4e16d679
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 14:24:01 2020 +0000
Issue #94 Updating the modulefiles for waves-prdgen
commit d5861551ae5b1fe2c2b00802159a42f7fde06357
Merge: 9b923ac3 0e0699aa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 09:49:08 2020 -0400
Merge pull request #109 from NOAA-EMC/feature/gfsv16b-restructure
GFSv16 restructure for new $COMPONENT subfolder
commit 1e76093c8554c3ccb87a7ed243f738f5763ca5da
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 13:47:44 2020 +0000
Issue #94 adding waves-prdgen to gfsv16
commit 0e0699aac7cb00988c999546dcdf3a52b11706e3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 13:47:29 2020 +0000
Issue #94 - fix to messed up shebang in setup_expt_fcstonly.py
commit c7a708fd54ffe60c6259f35c4230e6e73ecd6f77
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Tue Aug 18 21:16:19 2020 +0000
Issue #94 adding waves-prdgen for gfsv16
commit 0b2744e53a35c570178b7e6cd7ede72b6255c579
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Fri Aug 14 17:36:31 2020 +0000
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
commit 4888001e76d24277b3a75d1d520945383f49d456
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Aug 14 18:55:40 2020 +0000
updates for wave scripts to split them, also added updates from
GEFS branch to add extra error checking
commit 00dc1973010b68e65e176c90a1eeaef359b7beae
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Fri Aug 14 17:36:31 2020 +0000
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
commit fe849e918b30e6a9ca22ebe1a81e350afc4ed6cf
Merge: 0c06cda7 9b923ac3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 13 18:49:52 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit 9b923ac308841d7accfc6ed2a4ef9733dce2305e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 13 18:37:51 2020 +0000
Issue #1 - update to prod_util version (1.1.3 -> 1.1.4) on WCOSS-Dell for post P1/P2 removal
commit 0c06cda7dd667e936e8aa71fc1c584a4839094ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 18:50:44 2020 +0000
Issue #94 - update CFP module version on WCOSS-Dell
commit b73d25224d8208291048b774a91497928b051713
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 17:58:55 2020 +0000
Issue #94 - update WCOSS-Dell module versions to prod_util and EnvVars
commit 485ee56c1e772e8efa944ee9a3f350130d49a718
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 13:00:42 2020 +0000
Issue #94 - fix AWIPS file dependency
commit bdaa28fbdc2372ed85320a4b044a33d350e2e7be
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 7 13:34:22 2020 +0000
Issue #94 - updates for FSU tracker
commit 4cee6f65467c34e171ed3e0bdc72458a875e5e21
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 5 17:14:04 2020 +0000
Issue #94 - adding -o flag to checkout.sh for optional GTG checkout with EMC_post
commit 563d2931378c3d6276212cc9c4e2a4e9a286589c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 4 18:19:47 2020 +0000
Issue #94 - small fix to updated UFS_UTILS part of link_fv3gfs.sh
commit 8a1fea478bcfdec3ad436e77fdfe8c601a050c77
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 30 18:27:57 2020 +0000
Issue #94 - move UFS_UTILS link script step from build_ufs_utils.sh to link_fv3gfs.sh based on feedback from GEFS team
commit f54d938ac8faf3c5d0362770b645dcef57b43c30
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Jul 29 14:28:03 2020 +0000
Issue #94 - reverting GSI and EMC_gfs_wafs checkouts back to authoritative repos ahead of their updating for new , will update EMC_gfs_wafs to new tag when available
commit d3866af6cc8060f88b3bd780b7f6a6f52a8ecba0
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Jul 29 13:39:07 2020 +0000
Issue #94 - add default to fhmax in vrfy.sh for when prior tasks disabled and set new path to restructured gfsmos
commit 9c2791ed037d62f35aa33875c20de8ac3f823337
Merge: e8a714b2 d1751309
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jul 27 14:44:59 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit e8a714b2fa20cce87ed018b3a9215bef37ee0d10
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jul 27 14:37:34 2020 +0000
Issue #94 - retire BASE_SVN
commit 5867d4b3de7b6ee7d8f913d573b4a0f44d973320
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Jul 24 15:00:41 2020 +0000
updates from gefs post workflow: updates for re-run case
as well as extra error messages
commit 03daf01d440e702deccfcd246db069783f2c513d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Jul 24 14:14:25 2020 +0000
Issue #94 - removing new install script, will introduce via another branch, needs more testing
commit 9c0765cec06ea0f80528cba722884a4971beb345
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Jul 24 14:08:36 2020 +0000
Issue #94 - add to gempak scripts and cleanup based on PR feedback
commit fb70d6fb7a2407bd17c2c587224e66401a6cf1c0
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 23 14:35:56 2020 +0000
Issue #94 - updating GLDAS and EMC_post tags in Externals.cfg
commit 3bfdc01419b1ea8748f8ce7ebcf00ac6b520f8d7
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 23 14:34:28 2020 +0000
Reverting link_fv3gfs.sh, will commit in different changeset
commit d1751309fc1999cdc4fdbc603e429ee61fbcf38c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Jul 23 11:20:15 2020 +0000
Issue #1: refactor CFP in DA sections of HERA.env and WCOSS_DELL_P3.env
commit 821c93cae54d9fa24887cbe2072df4f63aeadb7d
Merge: 95ce8235 145f8105
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Jul 21 17:15:43 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit 95ce823552c20aa15426c4c98feb3c7d147ec89e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Jul 21 14:10:09 2020 +0000
Issue #94 - new GLDAS tag with atmos directory
commit 145f81056802cb7246a50f7951c2e191a994032f
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Mon Jul 20 21:09:40 2020 +0000
Issue #1: add enkf member sfcf006.nc to enkf tarballs
commit ab89088d3a59ee5d5389fa8e527e0444692c1542
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jul 20 19:07:02 2020 +0000
Issue #94 - component checkout updates to use forks and new UPP tag
commit 4eec6641424d3947ae792f632f9b401bb569173a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jul 20 13:31:23 2020 +0000
Issue #94 - fix dirpath in ush/hpssarch_gen.sh
commit 727c3ffdeee5b77e65b6665b2cf34b6a30736bbc
Author: George Gayno <George.Gayno@noaa.gov>
Date: Fri Jul 17 18:27:26 2020 +0000
feature/gfsv16b This commit references #102.
Some cleanup to enkf_chgres_recenter_nc.
commit d0378245016ba506b9e57a35dcaed8ce10830a9a
Author: George Gayno <George.Gayno@noaa.gov>
Date: Fri Jul 17 15:59:59 2020 +0000
feature/gfsv16b This commit references #102.
Initial updates to enkf_chgres_recenter_nc to output any
number of vertical levels. Turn off horizontal interpolation
if input and output grids are the same.
commit 273c5353bc310b22459fe605662c07922a41e4f4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 16 17:52:43 2020 +0000
Issue #94 - revert RSTDIR_WAVE if-block compression to retain breakpoint restarting
commit 3d9f0dc81a63b5d1b54981314fac36a82119e811
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 16 17:19:21 2020 +0000
Issue #94 - remove COMPONENTatmos and COMPONENTwave, use COMIN[COMOUT]atmos[wave] instead
commit 19d3f72b5f6f1ec145cf95e47c1fe9ca970d40cb
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 16 16:05:56 2020 +0000
Issue #94 - updates to wave scripts based on NCO feedback
commit 0056b413a65aea9700561c5a9b07946fb34be6b5
Merge: 987d8cf5 d7425d02
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Jul 16 13:35:13 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit 987d8cf5621e8c302d0f9a7941f4d74222fbf218
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Jul 15 17:50:34 2020 +0000
Issue #94 - added and [wave] back in after feedback from Steven Earle, also renamed the wave scripts to match the correct convention
commit 49825b3b93080b70b56752477a9406e1765ecdf3
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Jul 14 23:04:08 2020 +0000
GitHub Issue#94 update gempak's ush scripts
commit d7425d02bb9027fe3ea5ceb31d515d70dddb4ec4
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jul 14 19:50:54 2020 +0000
Revert "modified: config.base.emc.dyn to use obsproc_prep.iss70457.netcdfhistory_atmos"
This reverts commit 49772711c37d74740427c241a477afe21ee62d7c.
commit 49772711c37d74740427c241a477afe21ee62d7c
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jul 14 19:45:32 2020 +0000
modified: config.base.emc.dyn to use obsproc_prep.iss70457.netcdfhistory_atmos
commit 8b0f57fdfd4a8710e176f0035356fb01d781dd70
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon Jul 13 23:43:55 2020 +0000
modified: ../Externals.cfg and checkout.sh to check out
UPP tag tag upp_gfsv16_release.v1.0.10 and model tag GFS.v16.0.10
Updated the algorithm used to compute CAPE and CIN in UPP. The computation
is now bounded from the surface up to 1 hPa instead of the model top to
avoid producing erroneous large CAPE and CIN values.
commit 37e0f57d948fa98c66fcc9d9695de2769a4a38d2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jul 13 17:26:52 2020 +0000
Issue #1 - add mod_icec.sh to UPP ush script symlinking in link_fv3gfs.sh
commit 663542ea2219eae322437058693cae3ade14e125
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Jul 10 20:01:17 2020 +0000
Issue #94 - fix dependencies with in the path
commit 866c4c4cf1a2cd177fed81396ddb40e657e8d55b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Jul 10 15:22:33 2020 +0000
Issue #94 - convert variables into hard-coded values per feedback
commit d57fc02801232de745e1c66b6cb0b459218dc042
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Wed Jul 8 22:59:35 2020 +0000
modified: checkout.sh to checkout model tag GFS.v16.0.9
1. WW3 update: write all restart files in a sub-directory restart_wave
2. Port production/GFS.v16 to Orion (#129)
* Update FV3 submodule
* Update NEMS submodule
* Add 'ulimit -s unlimited' to Orion job card template
* Update NEMS submodule to point to fix_moduleinit branch in 'junwang-noaa/NEMS'
* Update modulefiles/orion.intel/fv3
* Update regression test configuration on Orion (for gfs_v16)
* Update NEMS submodule (change /apps/lmod/init path after Orion maintenance)
* Update NEMS submodule (point to NOAA-EMC/NEMS)
commit 233f9f615ab1d5cee29c45143655978112bb79fe
Merge: 506e3bf4 ae7dbdb2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Jul 8 19:44:40 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit 506e3bf4d627093b06bc0a2d5cac63f99767742f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Jul 8 17:43:14 2020 +0000
Issue #94 - initial add of COMPONENTatmos variable to scripts
commit ae7dbdb2a37daabaa178b8924bad22684a673d4e
Merge: 6e73de0c 58fb7954
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date: Wed Jul 8 11:30:07 2020 -0400
Merge pull request #96 from NOAA-EMC/feature/gfsv16b_restart
modified: exglobal_fcst_nemsfv3gfs.sh etc to enable WW3 break-point restart capability
commit 58fb79548b2ac34a477b4520ca99ce32280b00fd
Merge: 4a1cf2b6 6e73de0c
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jul 7 15:58:25 2020 +0000
Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b_restart
commit 6e73de0ce5cd82c9e97d8078dd1ddd253f05a258
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Jul 7 15:03:09 2020 +0000
Issue #1: set g2o1_obtype_conus_sfc in config.metp to "ONLYSF ADPUPA"
commit 22ad770016b8a61bb672f1f76d62cb3d133f247c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Jul 7 13:47:26 2020 +0000
Issue #1: update sorc/checkout.sh to checkout verif_global_v1.9.0
commit 4a1cf2b6f45a76b91fbfa048def2cd647598e154
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon Jul 6 23:59:03 2020 +0000
further updated exglobal_fcst_nemsfv3gfs.sh to use restart_wave directory for gdas cycle as well
commit 5fe1a217d28e6710502b9524d3e3cce035364c37
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Sat Jul 4 19:43:29 2020 +0000
modified: jobs/JGLOBAL_FORECAST parm/config/config.wave scripts/exglobal_fcst_nemsfv3gfs.sh
add WW3 break-point restart capability and clean up forecast script.
commit 3fe6f9fc3aff9cff75aa6179cc545e635d28f312
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jun 29 19:44:12 2020 +0000
Issue #94 - commit initial version of new installation script
commit 30e56f2e84c6f1a66dc73db53cabc898b657374c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Jun 29 19:41:31 2020 +0000
Issue #94 - generalization updates to link script
- change 'nco' mode to 'prod' mode
- change 'emc' mode to 'dev' mode
- update machine values to match target names
commit 28b1faf03c5ad12e4e9a44f1d02c754f1441ebc7
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Fri Jun 26 02:31:18 2020 +0000
modified: config.vrfy to add
elif [ $machine = "HERA" ] ; then
export RUNGFSMOSSH="$HOMEgfs/scripts/run_gfsmos_master.sh.hera"
commit 61f4a52e299482687d84ef6686e6a65f64fe57f3
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Fri Jun 26 02:21:33 2020 +0000
corrected a typo in hpssarch_gen.sh
- echo "${dirname}${head}atma000.ensres${SUFFIX} " >>gdas.txt
+ echo "${dirname}${head}atma009.ensres${SUFFIX} " >>gdas.txt
commit b10a9306b732e543d2be3b932d556ebcdcbe8a5e
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Thu Jun 25 20:25:30 2020 +0000
modified: config.vrfy to point a different syndat directory on Hera
export COMROOTp1="/scratch1/NCEPDEV/global/glopara/com"
export COMINsyn=${COMINsyn:-${COMROOTp1}/gfs/prod/syndat}
commit b8192e54988f2fb2f4cda0510af02a090dfdda2e
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Jun 25 18:20:01 2020 +0000
Issue #1: HPSS archive and MOS script changes
* replace enkf member atmi*nc with ratmi*nc in HPSS enkf tarballs
* add ensemble resolution analysis to HPSS gdas tarball
* allow variable range to be externally set in run_gfsmos_master scripts
commit e599c368a2d55018e4a1567717efd7ffa09f14d9
Merge: 99277ae3 1e56eddb
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Jun 24 14:16:22 2020 -0400
Merge pull request #93 from JessicaMeixner-NOAA/bugfix/exiterr
fix for exiting properly with error for wave prep/init scripts
commit 1e56eddb055b1414385e276ac73255d3ede9e9e9
Author: JessicaMeixner-NOAA <Jessica.Meixner@noaa.gov>
Date: Wed Jun 24 12:36:53 2020 -0500
fix for exiting properly with error for wave prep/init scripts
commit 99277ae34ef50454fa15e7e28b564c2e34e3406c
Merge: 14dd3c94 4f8d5a5f
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jun 23 16:05:16 2020 +0000
Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b
commit 4f8d5a5f28c7120905fe36e9254f0199da986188
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Jun 23 11:57:26 2020 -0400
Update README.md
Remove use/mention of manage_externals until checkout.sh is retired.
commit 14dd3c94938b0e69601e25a42104b2fc23944ebd
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jun 23 15:53:11 2020 +0000
modified: Externals.cfg and sorc/checkout.sh to check out model tag GFS.v16.0.7
and UPP tag upp_gfsv16_release.v1.0.9. Changes include:
1) Inline POST Issues #136 and $142
* Update ceiling height calculation for global FV3.
* add low,middle,high instantaneous cloud fraction
* add radar reflectivity at model layers 1 and 2 , and radar reflectivities at 1 and 4-km height.
* fix a bug in initializing DBZI
* output mixed layer CAPE/CIN
* remove simulated GOES-12 brightness temperature.
* change the names of time averaged low/mid/high cloud fractions in grib2 files
from "TCDC" to "LCDC/MCDC/HCDC", respectively.
2) Model Issue #152
* update in-line post control files
* upgrade post library to 8.0.9 for hera and wcoss_dell_p3
commit dd76002425a03905bfc6ef63d3f43a6813814497
Merge: df89cc80 dd599eaa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Jun 23 11:34:40 2020 -0400
Merge pull request #91 from christopherwharrop-noaa/feature/fix_externals
Update version of upp in Externals.cfg to be consistent with sorc/che…
commit dd599eaa4f379e1eb8fc5e057f7904b0e6290d48
Author: Christopher Harrop <Christopher.W.Harrop@noaa.gov>
Date: Tue Jun 23 15:25:08 2020 +0000
Update version of upp in Externals.cfg to be consistent with sorc/checkout.sh
commit df89cc800d3c479c132a5e679a2562af91b32f62
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date: Fri Jun 19 18:40:26 2020 -0400
Update config.resources
Generalize setting of echgres threads to be maximum permitted on given platform instead of explicitly setting echgres threads on every platform.
commit ff8cd28365377f0ceed87ff8b4b9a9b4b6e91368
Merge: 1dd83b81 965ff420
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Jun 18 20:07:59 2020 +0000
Issue #1: merge branch 'feature/chgresfcst' at 965ff42 into feature/gfsv16b
commit 965ff4203f132c6b032398a7a56494329714247c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Jun 18 20:02:23 2020 +0000
Issue #85: update DA checkout to point at release/gfsda.v16.0.0
commit 71d714119960feed1f0807708cdf85677ab81d73
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Jun 16 20:11:33 2020 +0000
Issue #85: (1) rename "chgresfcst" as "echgres", (2) add chgres variables to env
commit 1dd83b818e9f2babbd11b762951721cf2a4c415e
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jun 16 16:07:45 2020 +0000
modified: run_gfsmos_master.sh.dell to still set range=both as the default for running the real-time parallel
commit eb0e3b4d009047251c535eea6fdc5958e58e68f7
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jun 16 14:43:29 2020 +0000
update checkout.sh to switch back to post version upp_gfsv16_release.v1.0.8. 1.0.9 still has issues.
commit dfc76f0715a29e52e4d7133a8259c492229a5c22
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Jun 16 13:32:01 2020 +0000
Issue #1 - sync Externals.cfg with checkout.sh update for FV3 GFSv16.0.6 tag
commit 7078bb5c680d54297101fae573579be24411a94a
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Jun 16 13:22:43 2020 +0000
modified: scripts/run_gfsmos_master.sh.dell to set default verification type o short.
modified: sorc/checkout.sh updated to model tag GFS.v16.0.6 to fix contrib issue on HERA
commit 15d5bed4119b067905f5a4bf47656557f2211883
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Mon Jun 15 20:47:47 2020 +0000
Issue #85: add cfp option to chgresfcst; enable threads with chgresfcst
commit d8782697fa698c00daa242a656246cf5f5d9b537
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Jun 15 16:00:35 2020 +0000
Issue #1 - update Externals.cfg to match updates to checkout.sh
commit a2bd621727701e9526feccc7ce8ebd43be31860f
Merge: 22b735d3 295cd05f
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Jun 15 11:57:14 2020 -0400
Merge pull request #84 from NOAA-EMC/feature/gfsv16b_herawavepost
Adapting wavepostsbs for running on Hera
commit 295cd05f306e4d70d09880a41fd60fadce74bab3
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date: Mon Jun 15 11:53:13 2020 -0400
Update exwave_post_sbs.sh
Removing obsolete nm variable entries
commit 22b735d310413989568dca4b30d19eadcd4c3fdb
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Fri Jun 12 20:06:49 2020 +0000
modified: checkout.sh to check out upp_gfsv16_relaese.v1.0.9
output cloud ceiling height and instant total cloud fraction.
output instant cloud fraction at low/mid/high cloud layer.
correct grib2 names of time averaged cloud fraction fraction at low/mid/high cloud layer from "TCDC" into "LCDC, MCDC, HCDC".
output radar reflectivity at 1/4 km above ground and model layer 1/2.
output mixed layer CAPE/CIN.
Remove simulated GOES-12 brightness temperature from gfs product.
Add the bug fix of initializing DBZI from Ruiyu.
commit 10ce1d4140c7c0fe795ded39e1fa550e0c202c59
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Thu Jun 11 18:42:22 2020 +0000
Issue #1 - Hotfix to update anaconda module contrib path on Hera
commit 58d1139c196f92bd4bb149008a8d61eb6457fb3c
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date: Thu Jun 11 02:44:41 2020 +0000
Adapting wavepostsbs for running on Hera
commit c330e60197c38acb724cfdf4a30a20417a6618b4
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date: Wed Jun 10 21:17:00 2020 +0000
add checkout.sh to test on Dell
commit 201609b2d43acd13a08bf1d5ab2251db90a11d32
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date: Wed Jun 10 20:51:51 2020 +0000
Commit changes from debugging addition of chgresfcst on hera
commit 4405a2c74c8b5a40ee6edd7b4c2faba9bd41b59c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Jun 10 14:36:03 2020 +0000
Issue #1: update parm/config/config.base.emc.dyn to be consistent with GFS v16 real-time parallel config.base
commit fc3066c2b7a5edd9f0d510b88f8542b07b8a8589
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date: Wed Jun 10 14:19:07 2020 +0000
First draft to add chgresfcst to rocoto workflow
commit 9f2e4ecfe5799e13a4f6b9e80f7ff3e7b4a3633c
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Mon Jun 8 00:34:07 2020 +0000
Issue #1: correct typo in scripts/exwave_prep.sh
commit 5a8b8f2e80532b7e446c51a69dcb83c7a212395d
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Mon Jun 8 00:15:31 2020 +0000
Issue #1: check for existence of 0p50 and 1p00 pgrb files before attempting to write to HPSS
commit a7306aa93d537da5b165297e0dc34ba88856d4c7
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Sun Jun 7 23:22:53 2020 +0000
modified: jobs/rocoto/post.sh
wait for 5 minutes if forecast history file does not exist before exit
modified: modulefiles/module_base.hera
use GV's temporal build of netcdfp/4.7.4 and esmflocal/8.0.1.08bs on HERA
modified: parm/config/config.base.emc.dyn
add restart_interval_gfs=0 to config.base. It is used by config.fcst and config.wave
modified: parm/config/config.fcst
-- fix a bug related to setting npe_wav for gfsfcst.
if [ "$CDUMP" = "gfs" ]; then npe_wav=$npe_wav_gfs ; fi
-- set io_layout="4,4" for writing gfs restart files
modified: parm/config/config.wave
set WAVE restart frequency based on restart_interval_gfs (by H. Alves).
commit 1082885b082e8a837aef095deb6a3343fca26cb3
Merge: 968b9860 bf5a5c44
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date: Thu Jun 4 20:26:47 2020 -0400
Merge pull request #83 from NOAA-EMC/feature/gfsv16b_restart
revive GFS forecast break-point restart capability with IAU turned on
commit bf5a5c44bdebff5663225e9e9548ba83f498f7cd
Merge: b27a01db 968b9860
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Thu Jun 4 23:36:52 2020 +0000
Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b_restart
commit 968b98609fe2016518f3adcc6b178bdca0b73bcf
Merge: 9b36cfde dc512dd6
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Jun 4 19:20:53 2020 +0000
Merge branch 'feature/gfsv16b' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b
commit 9b36cfde2032e9296cc7567704e1274560b2897e
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Jun 4 19:12:56 2020 +0000
Unify output path in gfs_bfr2gpk.sh
commit 7675368c3f7f3942b7f8a57bad4c29a38cef48fa
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Jun 4 19:11:23 2020 +0000
remove station elevation adjustment to T,Q and evaporation bug fix
commit dc512dd68df088361c340ac01ec3c8130707ffd1
Merge: a7b25a3b 987c32af
Author: Fanglin Yang <fanglin.yang@noaa.gov>
Date: Thu Jun 4 12:55:33 2020 -0400
Merge pull request #82 from NOAA-EMC/feature/gfsv16b_wavehera
Adjustment to wave workflow for running wave component on Hera
commit 987c32af7c7e94c53f50d20e1ad3c8b27e2c9afb
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date: Thu Jun 4 12:08:05 2020 -0400
Updating checkout to ufs-weather-model GFS.v16.0.5
commit a7b25a3bb0b7b5f1b8a15204ff1e7c061ea1199a
Author: Mallory Row <mallory.row@noaa.gov>
Date: Thu Jun 4 14:59:22 2020 +0000
modified: checkout.sh to check out METplus verification tag verif_global_v1.8.0
commit 0acee674759a5e2c8fbd4ec7b1cdd0459f95e2bd
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Jun 3 20:10:09 2020 +0000
Issue #1: remove redundant entry from config.ediag; update checkout.sh to pull GFS v16 DA from github
commit b27a01db1516f9aa229e75957885ffa2125d31d6
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Wed Jun 3 16:58:29 2020 +0000
modified: parm/config/config.fcst
modified: scripts/exglobal_fcst_nemsfv3gfs.sh
GFS forecast restrat capability from a breakpoint is no longer working
with IAU turned on. This function has been overhauled to make it more
general and works for cases with and without IAU
commit ba895481be53906878f58c2998a398bc59870ea2
Author: Jose-Henrique Alves <47567389+ajhenrique@users.noreply.github.com>
Date: Wed Jun 3 09:59:35 2020 -0400
Update JWAVE_PREP
Removing lines using for testing presence of files while debugging.
commit bb79d7a33c423770f4972c9c643c5dfa7fb0f3be
Author: wx20ha <henrique.alves@noaa.gov>
Date: Wed Jun 3 02:45:33 2020 +0000
Fixing a few minor bugs in wave_tar.sh after testing on WCOSS
commit 8dc2e255e77a55c0f7d90a5018f769ade1e83a9f
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Wed Jun 3 01:41:18 2020 +0000
add new file: run_gfsmos_master.sh.hera
commit 3393cac802b289cb9b6867c003ff27ef1711327a
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date: Thu May 28 00:01:51 2020 +0000
Correcting minor bug in wave_prn_cur.sh Adjusting indents in exwave_prep.sh Adding defaults for current processing in conif.waveprep.
commit 32c5f29b62cf747662909ff50a6bf8f327127a09
Merge: 49abb906 e87b5a18
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date: Wed May 27 17:40:34 2020 +0000
Merging latest feature/gfsv16b branch into feature/gfsv16b_wavehera
commit 49abb9068effc5aeeba8f861f44207b67ff442c9
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date: Wed May 27 17:36:12 2020 +0000
Adding comment indicating how to regenerate cdo interpolation weights.
commit e87b5a18f9dbad2230b9d3324f0c48a7b25d9b62
Author: wx20ha <henrique.alves@noaa.gov>
Date: Wed May 27 02:01:57 2020 +0000
JWAVE_PREP updated to use CDO_ROOT defined in config config.waveprep updated to default to WCOSS rtofs operational cdo if no module found wave_prnc_cur.sh bug fixed now provides proper fhr in temp file names exwave_prep.sh adjusted for WCOSS and Hera.
commit 70d71310132813c1066a9b0f881ef686602a23c4
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue May 26 20:39:33 2020 +0000
Issue #1: remove "_break" from commented out lines in config.anal and config.prep. "_break" will cause failue if line active
commit 914cb8dff96e45e690c8e1a2932c8d846afb1655
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue May 26 20:37:27 2020 +0000
Issue #1: correct typo in parm/config/config.anal
commit 2e12e63b13533a8a1b741bf55cbbaba49beb14cc
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue May 26 19:18:57 2020 +0000
Issue #1: update config.anal logic to point ABIBF at the correct GDA directory
commit 38cd82133b64af289648ca5e88fde1ac3dcaeab0
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue May 26 18:04:59 2020 +0000
Issue #1: update config files
* parm/config/config.anal - add logic to use correct global_convinfo.txt prior to GFS v15.3 implementation (2020052612)
* parm/config/config.awips - set NAWIPSGRP to equal NPOSTGRP (config.post)
* parm/config/config.fcst - add double quotes around CDUMP on levs test to prevent setup_workflow.py runtime error
commit 0dff61f103bab78f9d2426599f976dc318eff4e0
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon May 25 03:08:27 2020 +0000
modified: config.fv3 to reduce tasks assigned to the WAVE component. 70 tasks at C768 is adequate for wave.
commit 20ef779fd90a267affc0e80ae1f8a3f64afd2f8d
Author: henrique.alves <Henrique.Alves@noaa.gov>
Date: Fri May 22 19:52:55 2020 +0000
Redefining mpmd command for working on Hera with slurm Adapting wave scripts to execute mpmd command on Hera Adjusting wave_prnc_cur.sh for properly catting files on Hera
commit e248236b233b6bcf2dc008006a82ccd459d7e3f3
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Fri May 22 15:23:59 2020 +0000
modified: config.fcst to set
if [ $LEVS = "128" -a $CDUMP = "gdas" ]; then
...
lheatstrg=".false."
commit 96460e6e5f4b09b9fd10d39550bf022dc62c37ab
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri May 22 13:02:06 2020 +0000
Issue #1: replace "nawips" with "gempak" in hpssarch_gen.sh path to gfs sfc and snd files
commit 7222f84041f2a2f221e85d6543657f229408328c
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Thu May 21 14:09:36 2020 +0000
modified: checkout.sh to check out modle tag GFS.v16.0.4. changes include:
1. Remove constraints on mixing length and background diffusitivity over inversion layers on land
2. Enhance mass flux for deep convection, hence to increase subsidzing warming to reduce
cold bias in the lower tropospehre
3. Fix a RRTMg solar radiaiton bug which has impact in SW abosrption in the UV region in
the upper atmospehre.
commit 4fa08a77e59660f4b58279375a83d179c891b385
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Wed May 20 01:20:21 2020 +0000
modified: HERA.env to add
export CFP_MP="YES" # For analdiag with SLURM
commit 9f7df9d3552fd971cde09148bc392ad93bf104e0
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon May 18 15:06:19 2020 +0000
modified: checkout.sh to check out upp_gfsv16_release.v1.0.8
1) Add configuration for Orion.
2) Make fields at isobaric levels have 41 vertical levels for all forecast hours and analysis in pgrb2 dataset.
3) Remove SPFH at isobaric levels from pgrb2b dataset.
commit 5e4a1335ef3feb0242245b5661f22650a0a2e576
Author: Mallory Row <mallory.row@noaa.gov>
Date: Fri May 15 13:08:25 2020 +0000
modified: checkout.sh to check out METplus verification tag verif_global_v1.7.2
jkhender
added a commit
to jkhender/global-workflow
that referenced
this pull request
Oct 21, 2020
Squashed commit of the following:
commit 636ded675b81b15e8b3af2a211edf44f17972cf0
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 19:23:16 2020 +0000
Issue #1 - add wtime_fcst_gfs time of 4hrs for C384
commit 4007f116adcde8372e590489d0faa0181babbc15
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 18:29:15 2020 +0000
Issue #1 - fix firstcyc queue bug in workflow_utils.py on WCOSS
commit ebdb058fd138a7aa408d69c967747686ea5b77d9
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 13:23:05 2020 -0500
Issue #1 - resource updates from low res testing
- set io_layout to "1,1" for low res gfs in config.fcst
- set npe_wav[_gfs] to 140 for all resolutions, same wave grid
- increase nth_fv3 to 4 for C192 and C384
- set smaller walltime for gfsfcst when resolutions less than C768
commit 3f0ab6ff2dd4ca42a45e68972b1936d398b32097
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Oct 20 17:55:18 2020 +0000
Issue #1 - increase C768 npe_eobs to 200 for Hera nodes with less memory
commit d5b69c49ddbd03982db79f09707a49d01ef0b443
Merge: 4ebdd230 794e6655
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Oct 20 16:56:27 2020 +0000
Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion
* origin/release/gfsv16.0.0:
Issue #1 - pull in corrected npe_eobs values in config.resources
Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support
commit 4ebdd230c121a3c839829aa4ef855d80eb462549
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Oct 20 16:53:46 2020 +0000
Add UPP netcdf module library load to HERA.env to resolve runtime netcdf version mismatch
commit 794e6655cb227973e47b2373d0e4c97bf297479e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 16:45:58 2020 +0000
Issue #1 - pull in corrected npe_eobs values in config.resources
commit 1d0cad425b1e163377bba8ace6622bbbb2d81de0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:24:55 2020 +0000
Issue #1 - add parm mon folder to ignore list and move parm section of ignore list up
commit d632c87a8f2ce85d54fa45da14aa09f91a0ec680
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:20:31 2020 +0000
Issue #1 - add FDATE to config.base
commit 22d4118f4bc7853fa81f6505fd9aaf5bc6dab4f8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:12:29 2020 +0000
Issue #1 - save GFSv16 hand-off resource settings into new static nco configs
commit 6fd73d7fdf40b291ff49193b606538b540e46139
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:11:37 2020 +0000
Issue #1 - new FV3 tag that builds on Hera/Orion and update for building/running high res system on Hera
commit 484550c13d8ef957478f20afd6e722f7f610bb8f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 16 15:40:35 2020 +0000
Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support
commit 58dcf6d961f7478fec64a850e7bcd19ffd8f3741
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 15 15:08:38 2020 -0500
Update .gitignore for script renaming and removed external files
commit e3f8df65082853baa5a22ed3b242efdae66d40ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 15 11:59:58 2020 -0500
Add wave env updates into ORION.env, increase waveinit tasks, and update resources for analysis and efcs walltimes
commit e5e7cf1ea61d99080ec95b446c1bee45a57321a3
Merge: a1a7ac94 4b2d26db
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 13 14:25:56 2020 -0500
Sync merge with release/gfsv16.0.0 branch
commit 4b2d26db3b9b66ecfdd4756bfcddb6e16f255b03
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 13 17:41:24 2020 +0000
Issue #1 - adjust WAFS dependencies to wait for f036 post output
commit 9ef1999270e05c1ff5bae5ea5f737d9474c98b3d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 9 19:27:09 2020 +0000
Issue #1 - adding release notes for GFSv16
commit bf21010067bf7587be93229a979da347278fd7eb
Merge: d5e8be98 31563a59
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 9 18:15:36 2020 +0000
Merge remote-tracking branch 'origin/feature/gfsv16b' into release/gfsv16.0.0
commit d5e8be989d1f2f45095fea17fcb5ed1385759e89
Merge: 7728ce18 561e1953
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 9 18:13:53 2020 +0000
GFSv16 package changes from feature/gfsv16b before final wave updates
commit 31563a5982b26d7441e2673d68d1d1dac4fe231d
Merge: bf27d0b4 6edf0f7b
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 19:03:10 2020 -0400
Merge pull request #158 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit 6edf0f7b396587c4e014ba08fb6199461a970c41
Merge: 896ba312 bf27d0b4
Author: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov>
Date: Thu Oct 8 22:54:12 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Generating awips files with masks and elimination wmo headers for Arctic Ocean
commit 896ba31270185a1edaa3c6d32ec3c4295badf136
Author: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov>
Date: Thu Oct 8 22:50:48 2020 +0000
Issue #94 producing awips files with masks and deleting wmo headers for arctic ocean
commit bf27d0b4de54e6b873e20d784012c93384ad2358
Merge: 561e1953 959dac21
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 18:23:17 2020 -0400
Merge pull request #157 from JessicaMeixner-NOAA/feature/gfsv16b-wavegrids
Adding wave grids to grib interpolation
commit 959dac21e98ff96130f8e8c90a4b94b18c76f4f3
Merge: 50f33dd9 561e1953
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 21:57:29 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wavegrids
commit 50f33dd92e1f78f8879cb037652b1b4393511842
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 21:44:23 2020 +0000
updates to add glo_30m to the created grib files for waves
for awips processing
commit 561e19532e68aaff69f5b2568c3ebb2a536b7149
Merge: 7421143a 853a4619
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 16:10:32 2020 -0400
Merge pull request #156 from lgannoaa/feature/gfsv16b
Modify gfs/gdas post job to 20 minutes in wall clock.
commit 853a46199f2c59ff84422024b55a70e2679213ee
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 19:55:56 2020 +0000
Modify gfs/gdas post job to 20 minutes in wall clock.
commit 7421143a169264c8480aea5970a6d67f9bc56c43
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 18:40:28 2020 +0000
Issue #1 - update link_fv3gfs.sh to point to newly frozen fix_nco_gfsv16 FIX_DIR
commit 8ac89aee11e7099303600ba6df8e3d4bf4d70a66
Merge: db9fa173 eb4ad338
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 14:37:11 2020 -0400
Merge pull request #155 from lgannoaa/feature/gfsv16b
Further ecflow updates
commit eb4ad338dfa1f51c9ec4ada58601ffd3f6894d7f
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 17:58:29 2020 +0000
Modify two wafs jobs trigger as:
jgfs_atmos_wafs_grib2 trigger ../../post/jgfs_atmos_post_f000 == complete
jgfs_atmos_wafs_grib2_0p25 trigger ../../post/jgfs_atmos_post_f036 == complete
commit 589b1df4d5637f6e4521e79d4f286a463da477f3
Merge: 445a16b0 db9fa173
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 17:46:36 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit db9fa173028efd7ed796024a2f4753629e91922b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 16:01:50 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.10 and change WAFS job dependencies
commit 2a0c9739631ae4b1305a2653a1783cce287aeb96
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 15:12:10 2020 +0000
Issue #1 - update config.fv3 and config.resources with v16rt2 values
commit b5fbac7affc200e2c9a420f81615d0ae80b1dacf
Merge: 5dac3374 6402996f
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 10:36:43 2020 -0400
Merge pull request #154 from CoryMartin-NOAA/bugfix/eobs_resources
Change config.resources for eobs for low resolution cases
commit 5dac33742edd372a4e9b08c0b3029bb928cc569b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 14:35:23 2020 +0000
Issue #1 - update gfs_util modulefiles
commit 6402996f0cb5f787d04ac08efc8dd92dca767618
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date: Thu Oct 8 14:28:02 2020 +0000
Change config.resources for eobs for low resolution cases
commit aae0912df6b1398cdad563495475916970590b1a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 13:51:06 2020 +0000
Issue #1 - update to fbwndgfs modulefiles for WCOSS-Dell and WCOSS-Cray
commit 244e91ca0caf433f82e6e709413db4bac40aade2
Merge: 3bdda7fb 3b051e93
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 09:40:24 2020 -0400
Merge pull request #153 from JessicaMeixner-NOAA/bugfix/wavedependency
update wave post pnt dependency
commit 5962e117f93f1fc9f040f97b9446bcf9dc1138e1
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 11:24:41 2020 +0000
updates to parm to reduce the number of wave variables
changes to the config so that wave models are interpolated
to the multi_1 masked files for the regional output grids
commit 445a16b030384a84c60318600a5ccdeeccbd063b
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 04:03:32 2020 +0000
Modify module for each job to match implementation package change
Modify two wafs jobs trigger
Modify wall clock and resource for running jobs in NCO
Modify obsproc package location
commit 3b051e93adf60717f446564a08e5f3a11fd742af
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 01:10:14 2020 +0000
add a dependency for the wavepostpnt on wavepostbndpnt for just gfs
as this job does not exist for gdas
commit 3bdda7fb50676d25dbc03fffa739889a141b913c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 17:36:27 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.9
commit 3a700dbda1d6f6ef965cf2fbf30cfdf6cb2a8fe2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 14:36:02 2020 +0000
Issue #1 - remove POE/BACK block from config.prep and set POE=YES/BACK=off as defaults in env/WCOSS_DELL_P3.env prep section
commit 8cc7d57be3c1d08529dd37633a83a6ffa8ca94b3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 14:30:19 2020 +0000
Issue #1 - remove unneeded DMPDIR and ICSDIR from config.base.nco.static
commit 343ea3daece25bfeb1f8e870d361a364d1c228f0
Merge: 22f2a407 b57cd17d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 09:47:18 2020 -0400
Merge pull request #152 from JessicaMeixner-NOAA/feature/addwavedependency
for rocoto add a dependency to wavepostpnt job on wavepostbndpnt
commit b57cd17dafee5415b4955fcd8bbc76eb27e88740
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Oct 7 13:19:50 2020 +0000
for rocoto add a dependency to wavepostpnt job on wavepostbndpnt
so that both jobs will not run at the same time which will
slow both jobs down. This is the reason for the dependency, otherwise
there is not a "true" dependency between the jobs
commit 22f2a407e853b7d5342ee52faa53affdb25ac44e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 20:38:42 2020 +0000
Issue #1 - return POE=YES and BACK=off setting for prep on WCOSS_DELL_P3
commit c530316d07ae129f26907b2cae2079b55b37d0c2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 19:32:52 2020 +0000
Issue #1 - remove hardcoded POE and BACK values from config.prep
commit aece8baef1cd2f46991cb1235c315e228f7b661e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 19:02:37 2020 +0000
Issue #1 - move ABIBF, AHIBF, and HDOB pointers into RUN_ENVIR=emc block
commit c75766cd176802242f003ad3612aadff02563fb2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 18:17:35 2020 +0000
Issue #1 - update config.fv3 based on real-time parallel
commit f79ec7e0ce356213681e8c87655bb3fb66df16f1
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 17:40:16 2020 +0000
Issue #1 - update prep job resources
commit 577b060e63b1f47c77fd8e7a2d1b7f111fe6fcd4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 16:08:07 2020 +0000
Issue #1 - update g2tmpl module load in modulefiles/module_base.wcoss_dell_p3
commit c28d8cea538cdcdfc8557cb71120436edd86e313
Merge: 6197bc62 1b79fd35
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 11:16:32 2020 -0400
Merge pull request #150 from NOAA-EMC/feature/gfsv16b_updates
nwtest module library and tag updates
commit 1b79fd35e79fe7d0bc8eb460dfc08d44261fc470
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 14:34:26 2020 +0000
Issue #1 - config updates from real-time parallel
commit 11ca41294784278dc425e1ca1320253239a85d40
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 13:44:29 2020 +0000
Issue #1 - remove unneeded line in vrfy.sh and update link_fv3gfs.sh for UFS_UTILS execs
commit 97e9d7f2d75bb7167b56aaa70c53f53e4a189192
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 18:50:40 2020 +0000
Issue #1 - update GSI tag to gfsda.v16.0.0
commit f6689d462ba4528c99a2a331ae8890759ba25ecb
Merge: 01e36208 8048cd02
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 14:05:27 2020 -0400
Merge pull request #149 from GuangPingLou-NOAA/feature/gfsv16b
Add 6 bufr stations to the bufr sounding output
commit 01e362089fbf71a962fcdfc7db48f243b74e2e50
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 17:09:04 2020 +0000
Issue #1 - update component tags and modulefiles for nwtest lib updates, remove unneeded module load and modulefile from downstream wave job rocoto scripts
commit 6197bc623013d7fca82c556f3fb51c15832578b3
Merge: 451669a8 cd86b0ed
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 10:47:08 2020 -0400
Merge pull request #148 from NOAA-EMC/feature/gfsv16b_updates
Updates to optimize wave post jobs
commit cd86b0eddd305483007e1381d0d4a7256fa05680
Merge: 9b32bf0c 95bc516a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 14:16:50 2020 +0000
Merge branch 'feature/gfsv16b_updates' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b_updates
commit 9b32bf0c83ac9eb38f8d3b1b405b704b26c6592a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 14:16:21 2020 +0000
Issue #1 - adjust error handling in wave rocoto job scripts
commit 8048cd0285c8b9c8606673b04d60e8a137fe89b8
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:45:21 2020 +0000
issue #142 generate station i,j grid
commit e4e4b84235344b6da44ae732020115581abb9afe
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:45:00 2020 +0000
issue #142 generate station i,j grid
commit 68e5fd7279bf1f9c30fa4daa16bf44795f5e91f6
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:44:46 2020 +0000
issue #142 generate station i,j grid
commit fcf1f415333d53fe3a97546d4a16de55d6e1d703
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:43:49 2020 +0000
issue #142 add 6 bufr station data
commit 026b4e0a2ec1da85a3cc8c73053dd85fd4d56439
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:42:58 2020 +0000
issue #142 add 6 bufr stations for Thailand TMD
commit faaf8041faeecbc4c39cb37782bbe291ebd7a011
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:41:09 2020 +0000
issue #145 change dev path to prod for parallel netcdf modules
commit e6ba71f58ab5e88957f12fc742fded77a58f75d2
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:40:34 2020 +0000
issue #145 change dev path to prod for parallel netcdf modules
commit 95bc516af61e4aa35997f45ea625773f947c2125
Merge: 28904cdd a4d0e4d7
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 15:34:48 2020 -0400
Merge pull request #143 from JessicaMeixner-NOAA/feature/gfsv16b-wave-byhr
optimize wave post and EE2
commit 451669a8f8d7778addd7bbd090d2fe71c9a6e3f8
Merge: 340f849f 28904cdd
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 15:32:41 2020 -0400
Merge pull request #144 from NOAA-EMC/feature/gfsv16b_updates
Issue #1 - updates for modules and small fixes
commit 28904cddca4d3e432f6b155ae018b6a081aea82e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 19:05:10 2020 +0000
Issue #1 - updates for modules and small fixes
- fix to run ens_tracker without tclogg module in modulefiles/module_base.wcoss_dell_p3
- fix to sorc/syndat_qctropcy.fd/qctropcy.f for compile warning
- fix to gfswaveawipsbulls dependency in setup scripts
- update to bufr/11.3.0 from bufr/11.2.0 in modulefiles
- add override ability for POE for prep jobs in env/WCOSS_DELL_P3.env
commit a4d0e4d7a063c14f711bee5ef32cd0b183121ea7
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:59:22 2020 +0000
reverting changes to configs that were not intented to be committed
commit 2e6ba320b39b50030c8097a09700e2eb81cb724a
Merge: cb7b27c9 340f849f
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:08:59 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr
commit cb7b27c96c59388e39283b2c01aff2da92fcedbf
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:08:16 2020 +0000
fix resource time estimates
commit d51a260adc0fb003730ae4090c528856ac18be93
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:04:50 2020 +0000
bug fix in exgfs_wave_post_pnt.sh
commit 340f849f1cad6b562a941f15318eaf2d050743f1
Merge: 897286fb d5457ec1
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 12:00:00 2020 -0400
Merge pull request #141 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Updates to downstream wave jobs
commit 2b2635d441beb988e6c09a329eb80e1d519266ee
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 14:38:06 2020 +0000
update resources and trigger from 192->180
commit 56193a6bf9e8942edd54b7b7078143a3c91bc77f
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 14:10:05 2020 +0000
last of EE2 changes
commit ad5dcff885c3690f991936412453506deed543a6
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 14:01:25 2020 +0000
updates for EE2 from waves
commit d5457ec1e15e670677eea3171e68df20e4d6ca53
Merge: 4c488d30 897286fb
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Thu Oct 1 19:02:34 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Issue #94 Adding error capture in the Jjobs
commit 4c488d30947cf556d6cbf05d570fa6c41ae59ffb
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Thu Oct 1 18:45:21 2020 +0000
Issue #94 fix for failing silently
commit 897286fbdfea6a8d5765f9d89ab7c586bcadb201
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 1 18:14:37 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.8
commit e133c5d1d509781824140f5ec1d302502394dc89
Merge: a25a7dea 545742c4
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 1 09:13:05 2020 -0400
Merge pull request #140 from lgannoaa/feature/gfsv16b
Update ecflow scripts for GFSv16
commit 8f79b61ab8b0c7ed17b707eaae7736a3aedd33ef
Merge: cc9e98a6 a25a7dea
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Sep 30 16:09:27 2020 +0000
Issue #94 solving conflicts
commit cc9e98a6d03fa422f5080626da02426c174e2b45
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Sep 30 15:23:29 2020 +0000
Issue #94 add native grids as default grids
commit 545742c42c635d24c360a8c9b0902483cab66359
Merge: 65ba88e5 a25a7dea
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Wed Sep 30 14:05:40 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit a25a7deac9053dbb2ce119e3754f32c2d3f225b9
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 29 22:46:35 2020 +0000
Issue #1: update name of ncdiag executable and source code directory to be conistent
commit 2eab17ce11be26c7d113e16e3a9159e0e6395cac
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 29 19:05:21 2020 +0000
cleaning up the rearranged scripts
commit 65ba88e5ad97a560e4b1c6dd7a3568185e5ccbd9
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Tue Sep 29 18:22:29 2020 +0000
Jobs were tested with PDY 20200925, code managers from post, gempak, wave, and post process certified the test run result.
This merge included an update from high watermark testing (tested by gfs team using devonprod) results impact the following jobs:
jgfs_atmos_analysis.ecf
jgfs_forecast.ecf
jgdas_atmos_analysis.ecf
jgdas_enkf_update.ecf
jgdas_enkf_ecen.ecf
commit d86cfee7befd1d97c9ff6fd8cb58d2f9c9f9f1d8
Merge: abe24e27 69bdae3e
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 28 18:47:23 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr
commit 121bafee1e227119ddcba233da5b59af242128e4
Merge: 0d7ba5fb 69bdae3e
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Mon Sep 28 18:42:03 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 95f03be594d2944f14f0f6baa600bae27691e891
Merge: 7278b067 69bdae3e
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Mon Sep 28 17:30:03 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 69bdae3e7cdb35db28d899b7384daab48e888eb4
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Mon Sep 28 16:58:47 2020 +0000
Issue #1: update parm/config.vrfy to define VSDBJOBSH (used by jobs/rocoto/vrfy.sh)
commit abe24e279666ecccb27fb875322373b4920a66d3
Merge: d4ebc2e6 ef6d2c5c
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 25 21:56:05 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr
Conflicts:
parm/config/config.resources
commit 0d7ba5fb286ac280efda5510a23e2dbf625ba19a
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 25 21:34:42 2020 +0000
Code manager indicated all wafs jobs wall clock is 30 mins.
Code manager indicated job card for scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf need to be changed
commit 998228f94e36f63a0586f431fbcd32fb646d0ee6
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 25 21:02:57 2020 +0000
The EMC realtime parallel does not use operational job settings. Ecflow job card roll back the setting from module_used_gfs-16_job google sheet document.
commit 0e700ef159835510b3e3d02d27448826cb8dd914
Merge: 9b8e2f3a ef6d2c5c
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 25 19:49:13 2020 +0000
Bring change from upstream_feature_gfsv16b
commit ef6d2c5ca3243c579615ee47bcef494bc42f335e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 25 16:17:05 2020 +0000
Update GLDAS tag to gldas_gfsv16_release.v1.10.0
commit a9f8cb2616259b5610b9d101b5f9e50ea3013a2e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 25 16:06:11 2020 +0000
Update gfswafs job to run with loop over fcsthrs
commit 8187a31eca915184a43c0649db0170271b4ee6a9
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Sep 25 14:06:43 2020 +0000
Issue #1: update vrfy.sh to submit vsdb processing as separate job (only on WCOSS_DELL_P3)
commit 320f33033ac0f6f6919bd933c0a18d2a4088fcd6
Author: Roberto Padilla <Roberto.Padilla@noaa.gov>
Date: Thu Sep 24 23:29:10 2020 +0000
Issue #94 add /fakedbn to run DBN_alerts
commit 0d2c6280ac80d944ea7e9e2700430f42d24b3867
Merge: f9876550 83655eda
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 17:17:17 2020 -0400
Merge pull request #139 from NOAA-EMC/feature/gfsv16b_jobname
Update script names to match ecflow convention
commit 83655eda76114414f39c5e32a61b93186b42ac3c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 18:30:00 2020 +0000
Update config.awips for newly named JJOB scripts
commit 2f5fb01d02516a6fe72664c54cd97a5585f99a3f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 18:20:14 2020 +0000
Update WAFS jobs/rocoto scripts to use new JJOB names
commit 9b8e2f3a2b782c9dc602c620ce7efc2f7210d6dd
Author: lin.gan <lin.gan@noaa.gov>
Date: Thu Sep 24 15:30:45 2020 +0000
Making J-Job naming change accourding to code manager.
Remove temp files
commit ff50171eea7b99c7e89b0b773824464da5fe949f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 14:24:23 2020 +0000
Update post.sh UPP JJOB script name to submit
commit 0eb85537f30b1c89ed160374e2e7f8470d7a20d0
Author: lin.gan <lin.gan@noaa.gov>
Date: Wed Sep 23 18:42:52 2020 +0000
Modify each ecflow script with old j-job name for test.
Modify the following in each definition file.
- ecen family require new extern from previous cycle
- Job jgfs_atmos_npoess_pgrb2_0p5deg trigger changed to be (requested
from code manager):
1. jgfs_atmos_post_manager:release_post180
- Job jgdas_enkf_select_obs trigger changed to be:
1. previous cycle enkf post complete
2. current cycle jgdas_atmos_analysis_calc complete (new job)
Tested as of 9/21/2020 before production switch with following condition:
1. Known issue in wafs gcip. Job failed. Waiting for code manager to
fix.
2. obsproc testing still on going.
3. Code manager still updating j-job and ex-script names. Testing in
hold until package is ready and WCOSS availability.
commit 9fb09168c9aa2057a0c919f66bdf43b8e4e3a545
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 15:41:20 2020 +0000
Update config.base.nco.static with config.base.emc.dyn changes
commit a1a7ac9495446976b9e9ccae48a39bb4b868c19b
Merge: ee4bc2b7 70f5064e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 10:19:52 2020 -0500
Issue #5 - sync merge with feature/gfsv16b_jobname
commit 70f5064e8e345e073d9c0dc7da812d0a2a51d91d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 14:00:07 2020 +0000
Script name updates for sfc_prep and tracker
commit 4346c03a1aaf1cf1429a59b6a5682065c2c6e51b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 13:51:44 2020 +0000
Name change for tropcy scripts and update WAFS tag
commit 0ef9e49d9752643fa3ebdc8fc0ef9768968836d2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 22 17:50:35 2020 +0000
Fixing spelling mistake in config.gldas
commit 9fdb9eef052586c36abf034cd335ec649bf9cf19
Merge: 869dfa35 f9876550
Author: lin.gan <lin.gan@noaa.gov>
Date: Tue Sep 22 17:13:20 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 4b1affe520e0610c14168ccba4ef3439a3b7a966
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Sep 22 16:39:39 2020 +0000
Updated drivers and release notes
commit 2ed155ccee58d3cc72d7fdf6577806c7a14e58e9
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Sep 22 15:55:01 2020 +0000
Updated scripts
commit 6d171bc82f2c63f146fe1cf760c350b2effc20e6
Author: Wen Meng <wen.meng@noaa.gov>
Date: Tue Sep 22 15:26:37 2020 +0000
Update Externals.cfg with new UPP tag upp_gfsv16_release.v1.0.16.
commit 4b4069b715c9ebcc5122b79a1508f70ad7c78b46
Author: Wen Meng <wen.meng@noaa.gov>
Date: Tue Sep 22 14:59:24 2020 +0000
1)Update sorc/checkout.sh with new UPP tag upp_gfsv16_release.v1.0.16.
2)Update sorc/link_fv3gfs.sh with new file name convention for jjob and ex-script of post processing part.
commit c071ac0159cce98ea98ce5fa8dc5337b284ad136
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Sep 22 14:48:45 2020 +0000
Updated jobs name
commit ea13d0c9146457aadd65d567fda794beeeef6c7d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 22 14:27:47 2020 +0000
Update EMC_verif-global tag to verif_global_v1.11.0
commit 92e69985706cf62cdd7b383fd45c4cd50f937053
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 22 14:15:24 2020 +0000
Rename scripts to match ecf script naming convention. Add SENDDBN and DBNROOT. Update GLDAS tag.
commit 37ae040a0f21ec344228128e3e79910059c3b734
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 22 04:30:58 2020 +0000
In anticipating changes from the GLDAS repo : renaming JGDAS_GLDAS to JGDAS_ATMOS_GLDAS, and exgdas_gldas.sh to exgdas_atmos_gldas.sh
modified: driver/gdas/test_gdas_gldas.sh jobs/rocoto/gldas.sh parm/config/config.gldas sorc/link_fv3gfs.sh
commit c58b93a61f77d65f042f8226445163029ebd9f8d
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 22 04:06:06 2020 +0000
renamed: jobs/JGFS_POSTSND -> jobs/JGFS_ATMOS_POSTSND
renamed: scripts/exgfs_postsnd.sh -> scripts/exgfs_atmos_postsnd.sh
modified: docs/archive/README_bufr
driver/product/run_postsnd.sh
driver/product/run_postsnd.sh.cray
driver/product/run_postsnd.sh.dell
driver/product/run_postsnd.sh.hera
driver/product/run_postsnd.sh.jet
parm/config/config.postsnd
commit bec1b83027e162e4c083464d2cdb3fbdbd5168e8
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 22 03:51:02 2020 +0000
renamed: scripts/exglobal_fcst_nemsfv3gfs.sh -> scripts/exglobal_forecast.sh
and modified jobs/JGLOBAL_FORECAST parm/config/config.fcst
commit d4ebc2e6798d13af1ced8a51899e80e209a13c71
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 21 18:28:15 2020 +0000
updates for optimizing point jobs
commit 7278b0677be6168a9695fca6c2e08154d9af0f63
Merge: 928e3e4b f9876550
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Fri Sep 18 18:35:06 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit f98765509cc7fc0e7b8979abfc73dbc5db035825
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 18 16:58:57 2020 +0000
Issue #1 - update SEND variables and add DBNROOT to base configs and add check to build_enkf_chgres_recenter_nc.sh for GSI build
commit e9e8d63db112ab8f5e15de08a1714cfebd386a2a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 18 15:18:48 2020 +0000
Issue #1 - update to UFS_UTILS ops-gfsv16.0.0 tag
commit 3df7625d74012552cf69fcfe7c0b5384b860c999
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 18 13:25:00 2020 +0000
Issue #1 - fix to link_fv3gfs.sh for new GLDAS tag
commit 928e3e4b53e969f8ecdd3544c3bf2668b57c66b3
Merge: dd081426 1fc7bde9
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Sep 17 20:00:17 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit dd08142664e5695e3f27890c0560f0b5e48841a8
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Sep 17 19:57:20 2020 +0000
Issue #131 Unify dbn_alert path
commit 1fc7bde9b7f99da7d0430387ec4a547e73ea641b
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Sep 17 19:37:41 2020 +0000
Issue #1: update to UPP tag "upp_gfsv16_release.v1.0.15"
commit 9eae5a8af39c4a8c5d47c16725ccc62b5d3c60cf
Merge: ce1c7825 99c15099
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Sep 17 13:46:58 2020 -0400
Merge pull request #135 from KateFriedman-NOAA/feature/gfsv16b-down
Small updates to downstream jobs and tag updates
commit 99c1509923399845ba794cb8fad981d12935dd03
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 17 13:13:14 2020 +0000
Fix for running prep on Hera
commit 869dfa350a013f66e5fdca66aa9b1f0192c1570c
Author: lin.gan <lin.gan@noaa.gov>
Date: Wed Sep 16 21:25:10 2020 +0000
ecflow full day cycle included
commit 515eeb5c6b188e873b304619c40c9a6efcfd9046
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 16 19:53:26 2020 +0000
Update WAFS tag to gfs_wafs.v6.0.6
commit 89f138af89814c865331b9aefcb8450b5915d1f7
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 16 16:33:21 2020 +0000
Small updates:
- new UPP tag
- new GLDAS tag
- new WAFS tag
- new module for WAFS
- EE2 updates to awips scripts
- added WAFS to archival
- break downstream and WAFS archival into separate gfs_downstream tarball
- update gfsarch dependencies to wait for all wavepost jobs to complete
commit 9930e8770a2940c46e22b243c11d2ac14f95611a
Merge: b3433d59 ce1c7825
Author: lin.gan <lin.gan@noaa.gov>
Date: Wed Sep 16 13:25:36 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit b100c22b5bfcf455ff3ff15bd71f0ddc15f1d071
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Tue Sep 15 18:57:21 2020 +0000
Issue #131 reduce scripts output to logfile
commit 6866e6cd2ef1e76dd58de27ebb7d68b2bd3fa304
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Tue Sep 15 18:55:03 2020 +0000
Issue #131 added a path to DBNROOT
commit b3433d59d1d5b75f015b0e044a8b4e03d55407f7
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Tue Sep 15 17:59:32 2020 +0000
Adding wafs wave and downstream jobs
commit 4c7ccd466bc71b3e73194ffc48385225e01e7c0c
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 15 15:29:44 2020 +0000
updates for by hour post
commit ce1c78255f4bf8f40c2f116547062c7f1b3832c5
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 15 10:25:37 2020 +0000
Issue #1: add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix)
commit 67b33dd15633345e0fd59dd37728c26b36d4c0b3
Merge: c33869da 586fe6ce
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Sep 14 10:34:39 2020 -0400
Merge pull request #130 from JessicaMeixner-NOAA/bugfix/rtofs
Bugfix for rtofs
commit 586fe6ce19c5fc281dec16be3347d0311f3e99ce
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 14 14:29:01 2020 +0000
adding the line to go back a day for RTOFS for the if not NCO
section because RTOFS will not be available until 06 cycle
commit 15fcb8a46e2cbc93282d1ad038e6decc5fcdacfb
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Mon Sep 14 13:30:24 2020 +0000
Restructured ecflow - up to post step
commit c33869dab2704396ea6e569dcd202a2b9866827a
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon Sep 14 02:34:08 2020 +0000
deleted relocate_mv_nvortex.fd since storm relocation is no longer needed.
modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex
commit 4320bf9fd55757df79b63ed15c2041b1acd0e604
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Sat Sep 12 00:05:38 2020 +0000
Issue #1: correct DA typos in sorc/link_fv3gfs.sh
commit 674cd841a7be3a2a9c772cd455ab980195ea9fcc
Merge: 46c2404e ad1a9d90
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 15:06:36 2020 -0400
Merge pull request #124 from JessicaMeixner-NOAA/feature/gfsv16b-wave
Splitting post jobs for waves
commit ad1a9d9044e89b75ec82bb201e35005552d3d177
Merge: 986f8f0b fd687727
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Fri Sep 11 14:01:35 2020 -0400
Merge pull request #4 from KateFriedman-NOAA/feature/gfsv16b-splitwavepost
Sync with feature/gfsv16b and small updates to split wave post changes
commit fd687727b2df80f81fabc41b94f808b74e68783c
Merge: 986f8f0b fc60e895
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 17:52:30 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-splitwavepost
commit fc60e895dea1c123a4b8e02b50df0d0cfa43f77f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 17:45:03 2020 +0000
Increase walltime for new wavepost jobs
commit e0dd1097de2c335400a546137569886a838c46ba
Merge: 0844b004 46c2404e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 14:20:15 2020 +0000
Merge branch 'feature/gfsv16b' into feature/gfsv16b-wave
commit 46c2404eba485d08e381ef81ebd5ac10c5ad605f
Merge: c5546570 9d9b79c9
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 10:15:49 2020 -0400
Merge pull request #128 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit c554657023d82ac934b481593e55406c45157932
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Sep 11 13:59:51 2020 +0000
Issue #1: update name of DA jobs and scripts in accordance with WCOSS Implementation Standards
commit 9d9b79c911add71065b0999821772d026609ad62
Merge: cb78f7b8 d3946f90
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Fri Sep 11 13:48:19 2020 +0000
Issue #94 solving a conflict
commit cb78f7b839a7b5fd5082f39592e3b450ce059e82
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Fri Sep 11 13:21:41 2020 +0000
Issue #94 add waves-prdgen, ICE->ICEC, Sleep in gempak script
commit b4a99e3d8b2f6a3837084ddfb08da6a667de81e0
Merge: edb91373 e6148566
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 11 13:19:13 2020 +0000
Merge branch 'feature/gfsv16b' of https://github.com/lgannoaa/global-workflow into feature/gfsv16b
commit e614856610da39345976823d29bdc32781f38c71
Author: lin.gan <lin.gan@noaa.gov>
Date: Thu Sep 10 16:26:11 2020 +0000
add gfs gempak downstream jobs into def file
commit 907291d81c512968817241b883a0084b8506f2b2
Merge: 3f9695b4 d3946f90
Author: lin.gan <lin.gan@noaa.gov>
Date: Thu Sep 10 15:46:45 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit ee4bc2b7268bf8f23ca7f7b3b631ddd6730c6a8c
Merge: 41d146fc d3946f90
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 9 08:54:17 2020 -0500
Issue #5 - sync merge with feature/gfsv16b
commit 6b38e648f244afbba9590ea1a4de70d4ce2ed119
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 8 22:14:13 2020 +0000
worked on wcoss
commit edb913733023b1025786901aee895d2dbca5edc7
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Tue Sep 8 16:09:07 2020 +0000
ecflow script rename after redesign approved - not including all wave jobs
commit d3946f9006f433e0a6b2f459aeaa7fd8bf800aff
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 8 14:46:39 2020 +0000
Issue #1: clean up DA sections of link_fv3gfs.sh
commit 986f8f0b9858f61d32d337a67efa966a7948aa94
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit 0844b0043c937925c5ad76b4fad03308483d49b3
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit c1d5c45c13b46964d9d2479962b8c56307a6ad11
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit 3f9695b44deef4790ae443f4d0c1844b1385374d
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Sep 3 19:07:35 2020 +0000
ecflow gfs v16 nco review 3
commit 256885283bb42c2309e820ca53b44042b8223617
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Sep 3 17:44:47 2020 +0000
updates to split boundary points plus saving config file updates
commit 8a203e5d5afa92a2b925f69efa5237a2c0d3dca6
Merge: 40c689b5 26c84b3c
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Sep 3 17:36:19 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 64409b1e9e976b75afd8a3548e7023dce534c4ae
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 3 15:42:23 2020 +0000
Adding missing space to if-block in env files to resolve runtime failure
commit 0485442f5876b82de73c47429d3a70f58f0aa263
Merge: 26c84b3c 2006bbcb
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 3 15:37:50 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-wave
* upstream/feature/gfsv16b-wave:
adding pnt jobs as seperate jobs for env
moving definitions of wavempexec and wave_mpmd from jobs to env
lowering the resource requirement for wave prep job
update module for cdo
updates to resources for wave jobs
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
cleaning up wave point post scripts
rename wave post script
remove gridded so can rename
updates to boundary point
Remove extra space from line
Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes
fix typos
updating WCOSS work around for CDO, CDO_ROOT is missing from module file
adding module use for cdo module on wcoss dell
updates for new weights file and adding cdo module for wave prep
Adding new wavepostbndpnt and wavepostpnt jobs
updating wave post scripts for restructured format
updates to JJOBs for wave post point for new structure
changing exit 0 to exit number for FATAL errors in ice prep for waves
updating error message and exit if there is no current input file
update WAVE_PREP so that currents do not check for previous 24 hour so that parallels will be reproducible also deleted unused variable
renaming wave job and scripts
update jobs for waves
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
updates for wave scripts to split them, also added updates from GEFS branch to add extra error checking
updates from gefs post workflow: updates for re-run case as well as extra error messages
commit 26c84b3ca81dec965ab31d00409b537f61174dc1
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Sep 3 14:06:29 2020 +0000
Issue #1: remove pgrb2b.0p25 dependency from gfsawips in setup_workflow.py
commit 40c689b5d5886d9a4bed92e0c6262bfc5988836d
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Sep 3 02:00:09 2020 +0000
ecflow gfsv16 redesign 2
commit 609e157c2477b662b55bbf3d53999cdd30856bc8
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 20:35:28 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.4 and remove HOURLY variable from WAFS configs
commit b0bebad6258bd81c0b0c89b559a04d9b059c838e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 20:08:01 2020 +0000
Issue #1 - change wavegempak and waveawipsgridded dependency to match waveawipsbulls and start when wavepostsbs is complete
commit 084c89e3d562f8c9977eaa17624646be388f7854
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Sep 2 19:58:37 2020 +0000
Issue #1: set n_sponge=42 in gfs section of config.fcst
commit 2006bbcb1e54e3cd5ae0ff2826b6d0b211c1d013
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 19:22:38 2020 +0000
adding pnt jobs as seperate jobs for env
commit c61cd59488b64ead77e13b2eb5faeb383d052ea0
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 19:02:21 2020 +0000
moving definitions of wavempexec and wave_mpmd from jobs to env
commit 68ed2d670ebe25713554f2165a0bbc7c35fb5030
Merge: 4e7975d2 70abda26
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 17:45:26 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave
Conflicts:
parm/config/config.resources
ush/rocoto/setup_workflow.py
ush/rocoto/setup_workflow_fcstonly.py
commit 70abda260dc9ab47533d25cd570dd055c4644123
Merge: 0a31d568 52e987ac
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 10:28:22 2020 -0400
Merge pull request #122 from KateFriedman-NOAA/feature/gfsv16b_wavedown
Add downstream wave jobs to GFSv16
commit 0a31d568bdacd0fb2d8bc6e1fddb09d2c72d014c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 14:09:57 2020 +0000
Remove unneeded settings from config.post
commit 52e987ac67477932e5b034321cf52f1cc756081c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 13:05:42 2020 +0000
Added null DBNROOT to wave awips configs
commit b3c7b7379a6ebb53b4d4533b894b1bf36df3c2fd
Merge: 074f2782 add6ea0b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 13:02:41 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b_wavedown
commit 806a57838b2a6fd8a9df993fd6cd8debf9fb659a
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 12:28:43 2020 +0000
add extra script for by hour points for waves
commit ab3e0b196bbb147da99da4ef34710e8d5fbb68ea
Merge: 054f8c53 4e7975d2
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 11:40:04 2020 +0000
Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave
commit 054f8c53608689b00b32d035ce728ed3d8cb3ad9
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 11:39:28 2020 +0000
updates for boundary points by hour parallelization
commit 4e7975d265857e4e634e0c7352f6ed2de1a99336
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 1 22:45:05 2020 +0000
lowering the resource requirement for wave prep job
commit add6ea0bae2c56bba2e3d76460771095b98786b1
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 1 19:40:10 2020 +0000
Issue #1: rename enkf_chgres_recenter executables in accordance with WCOSS Implementation Standards
commit 8a7e8d9944b8727da91bfb28bbfe44958f0aeb65
Merge: 4c9978a8 595edcfa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 15:00:08 2020 -0400
Merge pull request #121 from KateFriedman-NOAA/feature/gfsv16b-wafs
Adding WAFS jobs to GFSv16
commit 4c9978a8b0a98527d7c78a3da0a0a55e39cefed0
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 18:48:44 2020 +0000
modified: checkout.sh to use gldas_gfsv16_release.v1.6.0
commit 595edcfaaf1372889c8d569e01ec4dfefb51c469
Merge: 8a593c8d 06bda7de
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 17:30:08 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit ada0fb3155a57bdba074c84e1ab3d73eabb0e2f4
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 1 17:18:27 2020 +0000
update module for cdo
commit 074f2782438471740453e356b856a4756e59c858
Merge: a1a3d69b 8a593c8d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:30:56 2020 +0000
Sync with WAFS branch
commit a1a3d69ba40564f550053b99b4328ba41c7cc45d
Merge: 249b6ef7 06bda7de
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:22:20 2020 +0000
Sync merge with feature/gfsv16b
commit 8a593c8df03d8a879c5488fbd671fef94f5d867d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:09:49 2020 +0000
Update to WAFS tag and added SENDDBN_NTC to both base configs
commit 5270ed831c0b3c428736cbd8a789a4d3cfdcc0fe
Merge: 95ec3329 eabda84f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:03:53 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit 06bda7dec74831951034b72c83abbb2d994ee539
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 14:02:44 2020 +0000
modified: link_fv3gfs.sh to not link or copy
0readme fix_chem fix_fv3 fix_sfc_climo
which are not used by GFS.v16 and are of large size
commit eabda84f97c11251f672d95bb604ad0c50e8da18
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 13:48:11 2020 +0000
modified: link_fv3gfs.sh to remove chgres_cube.fd and chgres_cube.fd in sorc/link_fv3gfs.sh
commit 223492bf6c56c0491c0034dc1d4a0a3e6e97a607
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 03:59:53 2020 +0000
modified: link_fv3gfs.sh to allow "fix" directories to be removed before rerunning
link_fv3gfs.sh for RUN_ENVIR=nco case
commit 95ec3329e72a54b0dabdccdecd467972c4914dcd
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 18:57:32 2020 +0000
Added WAFS jobs to free-forecast mode, updates for extending WAFS to fh120, and two bug fixes in link_fv3gfs.sh and hpssarch_gen.sh
commit 6f660d9a9a5758f3d74f87f170a95a26ca0c0e6a
Merge: 8da41916 3282a899
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 17:58:55 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit 3282a8996ab0510699932a53897b87730b2cc492
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 17:47:37 2020 +0000
Renamed global-workflow-owned ex-scripts to remove ecf extension and updated other scripts which call those ex-scripts
commit 9cde3a41f34d0c2618e8fb06ff1276cec5378ef5
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 18:46:57 2020 +0000
Remove UFS_UTILS ecf extensions
commit f7a92dbc1c3ad822d3b8e567967e91384631288d
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Aug 28 18:09:26 2020 +0000
Issue #1: (1) update earc.sh directory removal to be consistent with arch.sh, (2) update config files to be consistent with EMC real-time GFS v16 parallel
commit 249b6ef761fb41b5d102b282fccedeb827192dff
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:52:54 2020 +0000
Remove ecf script name extensions from downstream wave scripts
commit 004a29f39204314159d2cbd028950cfaba07cf33
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:50:03 2020 +0000
Add new downstream wave jobs to workflow
commit 8da4191644ff55f46e8f394e4e1d29641d3c117c
Merge: 8f97726a 6319bda4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:42:11 2020 +0000
Sync merge with feature/gfsv16b
commit 8f97726a4170d56dcaf6732ae141fae9aaebfd8d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:39:50 2020 +0000
Add new downstream WAFS jobs
commit 6319bda47548873acb8859d9a47d2ac6a6ef4c67
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 15:41:55 2020 +0000
Issue #1 - update GLDAS and UPP workflow files for removal of ecf script extension
commit 8f7615c76f76611d748246a80d9286de7c4d3295
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Aug 27 20:53:25 2020 +0000
Issue #1: remove ".ecf" suffix from DA scripts referenced in sorc/link_fv3gfs.sh
commit af754d1fa0aa4a521fcd5b4fc04eaa88d475dbff
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Aug 27 20:47:14 2020 +0000
Issue #1: remove ".ecf" extension from DA exscripts (as per WCOSS Implementation Standards) referenced from parm/config files
commit a6e91b48b7024c83491fd1f93c6d7df8e3301af5
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 27 20:25:45 2020 +0000
updates to resources for wave jobs
commit f0b9a98973b7983eadab51c7009723b5d0b4a564
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Aug 26 23:04:02 2020 +0000
Issue #1: update name of DA enkf chgres script in config.echgres
commit 01f33c498bf0b5c0d48486cd04dab9c93c721906
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Aug 26 20:58:29 2020 +0000
Issue #1: Rename DA enkf chgres job and script as per EE2 guidance
commit 7d3f37819aba17dc794d10f7453061802779b435
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 18:35:59 2020 +0000
Workflow changes for wave gempak and awips downstream jobs
commit 485632eafe37c1866011af1bd0a601fb1c7adc4c
Merge: 2946baad e191fd4b
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Wed Aug 26 11:49:40 2020 -0400
Merge pull request #3 from KateFriedman-NOAA/feature/gfsv16b-wave
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
commit e191fd4bb87af787feab486bf072fe4dce7f12f4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 15:47:49 2020 +0000
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
commit 4641a72e1ced493c7ec5d837a3093908e388b5df
Merge: a1b08c92 25ae4899
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 11:33:23 2020 -0400
Merge pull request #119 from GeorgeGayno-NOAA/feature/gfsv16b
enkf_chgres_recenter_nc.fd - Remove hard-coded vertical levels.
commit 25ae4899cee3dc3aeff1e36f0ac1d0b0773ca2f9
Author: George Gayno <George.Gayno@noaa.gov>
Date: Wed Aug 26 14:25:36 2020 +0000
feature/gfsv16b: Add Cory's updates to build 'enkf_chgres_recenter_nc'
on Cray.
Issue #102.
commit 2946baad88d908b32793f542cab42f0c89adf009
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Aug 26 13:44:06 2020 +0000
cleaning up wave point post scripts
commit 3590e9a45e2b13b22ff3c3d4827907ddcf55eebf
Merge: 727c3ffd a1b08c92
Author: George Gayno <George.Gayno@noaa.gov>
Date: Tue Aug 25 20:20:17 2020 +0000
feature/gfsv16b: Merge updates from authoratative feature/gfsv16b
branch.
Issue #112.
commit a1b08c92892278453f25c2530f8b8fb968af9a34
Merge: 45ad029b ce3816d3
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 16:01:57 2020 -0400
Merge pull request #116 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit ce3816d3e88b8d2de7472a214e66cb54aceca9a6
Merge: b0c91610 45ad029b
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Tue Aug 25 19:55:53 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Issue #94 Adding prdgen for waves
commit 90181842fbb7a22479f12d3a67bcdc8fa4b8f669
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:02:22 2020 +0000
rename wave post script
commit 1f15be0a8207d3117200bcc145a5ae66b7445ec3
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:01:41 2020 +0000
remove gridded so can rename
commit 1fc5b368fe0cd438e2202b62de7753b7efed7af6
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:00:20 2020 +0000
updates to boundary point
commit f0e3ae5c2cd441673a4a670618e87f050a12c9e9
Merge: 98d6c163 b74b21e7
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Tue Aug 25 14:15:57 2020 -0400
Merge pull request #2 from KateFriedman-NOAA/feature/gfsv16b-wave
Feature/gfsv16b wave
commit b74b21e71edbb62207ccfcafe4c6ed5b6d301cfe
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 18:14:15 2020 +0000
Remove extra space from line
commit 25e2cc4596213b39d2a3dc3ee8afda4a86e10d38
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 18:12:04 2020 +0000
Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes
commit 45ad029bad4367961e5eff987f27226b0ac78d5a
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Aug 25 13:40:45 2020 +0000
Issue #1: several minor changes
* Externals.cfg and sorc/checkout.sh: update to tag verif_global_v1.10.1
* jobs/rocoto/arch.sh: update ARCDIR cp to use new path to tracker output
* scripts/run_gfsmos_master.sh.dell: remove module purge from mos driver script
commit 0a85a36ef0784bebf96d2f97c24dd4c642ac23f1
Merge: d5861551 5190efb1
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 09:20:42 2020 -0400
Merge pull request #118 from GuangPingLou-NOAA/feature/gfsv16b
Issue #117 Modufy Bufr station Hilo's grid point representation
commit 5190efb119c6eec6a7c67d90327dee4666307541
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Tue Aug 25 12:30:45 2020 +0000
Issue #117 Modufy Bufr station Hilo's grid point representation
commit 98d6c16336e5b0a3241174c54b7631667a4f919d
Merge: 0eacf5e2 32bd57ef
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 22:27:39 2020 +0000
Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave
commit 0eacf5e21c3149d2d922b4c2495e48fb2355e639
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 22:27:28 2020 +0000
fix typos
commit b0c9161061302ccf4b890cceabe5b4eaecb67e61
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 22:25:05 2020 +0000
Issue #94 changing native by interpolated grids for gempak
commit 8a68d3c6d6996f389609d5961f32f0db116797d1
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 21:47:44 2020 +0000
Issue #94 removing the load of modulefiles and sending set.pdy to j-jobs
commit 32bd57ef2b390dbe73a744188a40ca4c42c306fe
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 20:35:39 2020 +0000
updating WCOSS work around for CDO, CDO_ROOT is missing from module file
commit a2d06bb0bf82ee48899cb26ea9abf2331b543107
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 18:55:02 2020 +0000
adding module use for cdo module on wcoss dell
commit e5c9f037bd82ed4bc72cf11241d7c053160ff5b9
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 18:29:36 2020 +0000
updates for new weights file and adding cdo module for wave prep
commit 96655fbe5b5daf130d4a9a458ce47059c047376a
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 16:56:37 2020 +0000
Issue #94 removing modulefiles load from j-jobs
commit 7f9344f777075ce3220d9a9fccba74c07e4f40e2
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 14:32:26 2020 +0000
Issue #94 Solving reviewers comments
commit c9598a3207bb06cbd7d2619d97f723f6511da9a4
Merge: bf97710b 92a2a43d
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Mon Aug 24 10:12:43 2020 -0400
Merge pull request #1 from KateFriedman-NOAA/feature/gfsv16b-wave
Adding new wavepostbndpnt and wavepostpnt jobs
commit 92a2a43db190982944b4166b929a791a1b0b0750
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 24 14:06:23 2020 +0000
Adding new wavepostbndpnt and wavepostpnt jobs
commit bf97710bece30195679740b0de2b32e0adc6c3c6
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Aug 21 00:20:56 2020 +0000
updating wave post scripts for restructured format
commit a914521cec478667191b365e2a2a62e3553e0ff7
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 23:52:47 2020 +0000
updates to JJOBs for wave post point for new structure
commit 1f195f8d432072f4e4f66406ea6b09256a185d2b
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 15:20:28 2020 +0000
changing exit 0 to exit number for FATAL errors in ice prep for waves
commit f836a7869dbb88badd93fcd9d08314284eee4f96
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 15:17:28 2020 +0000
updating error message and exit if there is no current
input file
commit 529cc3692f4fc003295584e761279be3c9405b68
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:50:50 2020 +0000
update WAVE_PREP so that currents do not check for previous 24 hour
so that parallels will be reproducible
also deleted unused variable
commit 57c4258ba73778fe95118ebfae98c4bbf012ae37
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:09:22 2020 +0000
renaming wave job and scripts
commit 1626cb2f90bfea5663f198cfc2ac2916a9200e1a
Merge: da292216 d5861551
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:02:54 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-splitwavepost
commit da2922163922f4b4b14dba78dba36e9eced3a2c5
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 13:50:15 2020 +0000
update jobs for waves
commit a1c456f267ddf701aa47ad33fd231a2f1ae0bf99
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 20:09:47 2020 +0000
Issue #94 renaming the J-jobs
commit 41d146fc0fda97a41ef829ecff41b005bbf21740
Merge: c2a4f04e d5861551
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 13:54:13 2020 -0500
Issue #5 - sync merge with feature/gfsv16b after COMPONENT update
commit 036617c8a9b5da765b82c276f7b087aa4e16d679
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 14:24:01 2020 +0000
Issue #94 Updating the modulefiles for waves-prdgen
commit d5861551ae5b1fe2c2b00802159a42f7fde06357
Merge: 9b923ac3 0e0699aa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 09:49:08 2020 -0400
Merge pull request #109 from NOAA-EMC/feature/gfsv16b-restructure
GFSv16 restructure for new $COMPONENT subfolder
commit 1e76093c8554c3ccb87a7ed243f738f5763ca5da
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 13:47:44 2020 +0000
Issue #94 adding waves-prdgen to gfsv16
commit 0e0699aac7cb00988c999546dcdf3a52b11706e3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 13:47:29 2020 +0000
Issue #94 - fix to messed up shebang in setup_expt_fcstonly.py
commit c7a708fd54ffe60c6259f35c4230e6e73ecd6f77
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Tue Aug 18 21:16:19 2020 +0000
Issue #94 adding waves-prdgen for gfsv16
commit 0b2744e53a35c570178b7e6cd7ede72b6255c579
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Fri Aug 14 17:36:31 2020 +0000
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
commit 4888001e76d24277b3a75d1d520945383f49d456
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Aug 14 18:55:40 2020 +0000
updates for wave scripts to split them, also added updates from
GEFS branch to add extra error checking
commit 00dc1973010b68e65e176c90a1eeaef359b7beae
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Fri Aug 14 17:36:31 2020 +0000
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
commit c2a4f04e50ccb45febf55f7985c64a287973dee0
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 14 08:21:01 2020 -0500
Issue #5 - update for COMINsyn on Orion
commit fe849e918b30e6a9ca22ebe1a81e350afc4ed6cf
Merge: 0c06cda7 9b923ac3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 13 18:49:52 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit 9b923ac308841d7accfc6ed2a4ef9733dce2305e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 13 18:37:51 2020 +0000
Issue #1 - update to prod_util version (1.1.3 -> 1.1.4) on WCOSS-Dell for post P1/P2 removal
commit bf0bff444bdd8a02e1c875eadbdc6b60628cff76
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 12 10:00:51 2020 -0500
Issue #5 - update to JGFS_CYCLONE_TRACKER for machine=ORION
commit 0c06cda7dd667e936e8aa71fc1c584a4839094ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 18:50:44 2020 +0000
Issue #94 - update CFP module version on WCOSS-Dell
commit b73d25224d8208291048b774a91497928b051713
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 17:58:55 2020 +0000
Issue #94 - update WCOSS-Dell module versions to prod_util and EnvVars
commit 485ee56c1e772e8efa944ee9a3f350130d49a718
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 13:00:42 2020 +0000
Issue #94 - fix AWIPS file dependency
commit 5a7e45e398efafb4b5b6cde0a69f799a99406d34
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 7 09:48:45 2020 -0500
Issue #5 - add missing AND condition for wavepostsbs
commit bdaa28fbdc2372ed85320a4b044a33d350e2e7be
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 7 13:34:22 2020 +0000
Issue #94 - updates for FSU tracker
commit e8800078f8d00e9447ed81b83eb49135110deb8f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 6 14:31:05 2020 -0500
Issue #5 - change UFS_UTILS checkout back to auth repo release/ops-gfsv16 branch after commit to it
commit df20d848de2420eacba296ebdf9c9fe68d697351
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 5 15:46:27 2020 -0500
Issue #5 - fix for errant text in setup_workflow_fcstonly.py for waveinit job settings
commit 4cee6f65467c34e171ed3e0bdc72458a875e5e21
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 5 17:14:04 2020 +0000
Issue #94 - adding -o flag to checkout.sh for optional GTG checkout with EMC_post
commit 563d2931378c3d6276212cc9c4e2a4e9a286589c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 4 18:19:47 2020 +0000
Issue #94 - small fix to updated UFS_UTILS part of link_fv3gfs.sh
commit 7c4f8eab074115323a7812dc498e8ea043916718
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 4 08:53:39 2020 -0500
Issue #5 - add new APRUNCFP setting to ORION.env
commit 5652485ef0cc42f8814df9d08e8b953b025d08b4
Merge: 5cf8a458 d1751309
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 3 13:10:27 2020 -0500
Issue #5 - Sync merge branch '…
lgannoaa
pushed a commit
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that referenced
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Feb 9, 2022
NOAA-EMC#124) * Added odin support and fixed missing values for convective related variables * Added back trailing spaces to INITPOST_NETCDF.f * Incorporated Wen Meng's field attribute fix
WalterKolczynski-NOAA
pushed a commit
that referenced
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Mar 28, 2024
…2421) This PR addresses issue #2329. The following is accomplished: - All submodule RDHPCS Hera stacks are updated to be compatible with the Rocky-8 distro spack-stack; - The global-workflow version files `versions/build.hera.ver` and `versions/run.hera.ver` are updated for Rocky-8; - All submodule hashes have been updated to be compliant with the Rocky-8 distro spack-stack (see the reference PRs below); - Update to `parm/config/config.base` is made for not yet compliant packages; - Relevant updates are made to `modulefiles/module_base.hera.lua` and `modulefiles/module_gwsetup.lua`. Resolves #2329 Refs: [#958](NOAA-EMC/GDASApp#958) [#49](NOAA-EMC/gfs-utils#49) [#124](NOAA-EMC/GSI-Monitor#124) [#31](NOAA-EMC/GSI-utils#31) [#2167](ufs-community/ufs-weather-model#2167) [#2143](ufs-community/ufs-weather-model#2143) [#913](ufs-community/UFS_UTILS#913) Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com> Co-authored-by: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
kayeekayee
added a commit
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Apr 11, 2024
Squashed commit of the following:
commit c54fe98c4fe8d811907366d4ba6ff16347bf174c
Author: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Date: Tue Apr 2 15:58:49 2024 -0400
Move bash utility functions out of preamble (#2447)
The preamble was accumulating a bunch of utility functions. These
functions are now moved to a separate file that is sourced by the
preamble. The only functions remaining in the preamble are those related
to script control and logging (`set_trace()`, `set_strict()`,
`postamble()`).
Resolves #2346
commit 4a39c8afc0555a8f2d621efb55589b9b309a416c
Author: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Date: Tue Apr 2 18:00:21 2024 +0000
Reenable the minimization monitor on Hera (#2446)
This allows the minimization monitor to run on Hera Rocky 8.
A missing perl module was added (List/MoreUtils.pm), but had to be
installed under the perl/5.38.0 installation, thus that module needs to
be loaded.
Resolves #2439
commit 0eaa53771b5e8d476d3b5feabd3181c8dc48629a
Author: Travis Elless <113720457+TravisElless-NOAA@users.noreply.github.com>
Date: Tue Apr 2 00:31:14 2024 -0400
Fix rotating member bugs (#2443)
When PR #2427 introduced the rotating subset of member guess states for
the early-cycle EnKF, the rotating member calculation function was
omitted from the DOSFCANL_ENKF if block in the enkf surface script. This
PR adds this feature to this section. This PR also removes hard coded
values that were included in this function and are replaced with a
variable equal to the number of late cycle members.
Resolves #2441
commit 39ba9d720c38ac85239a1eb1696c78df82396644
Author: CatherineThomas-NOAA <59020064+CatherineThomas-NOAA@users.noreply.github.com>
Date: Mon Apr 1 17:48:42 2024 -0400
Remove the reset of upper layer humidity (#2449)
# Description
The parameter "nudge_qv" resets the upper layer humidity to HALOE
climatology when cold starting. This parameter has been set to ".true."
but is no longer needed using v16+ ICs and will now be set to ".false."
by default.
Resolves: #2448
commit 7f6bf216566e92bbe072ebe4b64d26cc60fb53f1
Author: Jiarui Dong <Jiarui.Dong@noaa.gov>
Date: Mon Apr 1 13:08:33 2024 -0400
Archive the snow DA analysis into HPSS (#2414)
This PR adds the capabilities to archive the snow analysis output into
HPSS. Changes are made to archive the snow stats, letkfoi yaml file and
snow analysis into HPSS.
commit c1b11a2559e618f61866498b5dad503ba74d8332
Author: Neil Barton <103681022+NeilBarton-NOAA@users.noreply.github.com>
Date: Mon Apr 1 13:05:57 2024 -0400
Add GEFS ENS Atmos options (#2392)
This PR adds the FV3 atmos perturbation options when running GEFS. This
is needed for GEFS reforecasts and GEFS operational forecasts.
This PR continues to address the below issues
#1720
#1921
Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com>
Co-authored-by: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Co-authored-by: Bing Fu <48262811+bingfu-NOAA@users.noreply.github.com>
commit 834ce31348a627e14d448cdbe33d4ec0dabe99e4
Author: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Date: Fri Mar 29 13:17:08 2024 -0400
Refactor gempak jobs for new COM and style (#2374)
Updates the gempak jobs to fit the new COM structure while also
refactoring them some to improve the style. Despite these technical
changes, the overall structure is left unchanged for most scripts,
though some have been rewritten to make the needed changes easier. Some
of these scripts had already been updated some in the original COM
refactor and thus needed fewer updates.
Style updates includes converting all gempak scripts to bash, making
them shellcheck compliant, and removing trailing whitespace. Further
refactoring to improve maintainability will be needed in the future (see
#2341, #2342, #2343, #2348).
The GFS gif scripts were identical except the forecast hour, so they are
collapsed down into two: one for f000 and one for other forecast hours.
The gempak executables have short path limits. To get around this
without having the gempak module recompiled, target directories (mostly
relevant for the gempak meta jobs) are symlinked into the working
directory to drasticly reduce the path lengths.
Part of this update includes replacing existing MPMD calls with the new
standard `ush/run_mpmd.sh` script.
A new function, `wait_for_file()`, is introduced to standardize waiting
for a file to be available.
Gempak forecast hours are often hard-coded within scripts. In addition
to issues with maintainability, this causes problems for shorter
forecasts, such as we typically run for testing purposes. For now, we
simply check the values against the forecast length and reduce if
necessary. Future work (#2348) will be needed to remove these hard-coded
values with variables set in the config file (or just use update gempak
products to match standard output time variables).
One-degree gempak files have been updated to include `1p00` in the
filename.
Several gempak job dependencies are corrected.
Fake gempak data for external models is being staged on tier-1 machines
to allow testing.
**Output has not been verified.** Future PRs will likely be needed to
bring full functionality online.
Resolves #2158
Resolves #2152
Resolves #2151
Resolves #2249
Resolves #2247
Refs #2157
Refs #2348
commit 20635b0639656769842218d544ec7ce2436337c5
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Fri Mar 29 08:15:29 2024 +0000
Turn GEFS CI test on for Hera (#2442)
Re-enabling gefs case to test gefs system builds in Jenkins on Hera.
Co-authored-by: TerrenceMcGuinness-NOAA <terry.mcguinness@noaa.gov>
Co-authored-by: terrance.mcguinness <terrance.mcguinness@noaa.gov>
Co-authored-by: Walter.Kolczynski <Walter.Kolczynski@noaa.gov>
commit ba6a9d5fa6a079b1e3fdd424a493252bbf499c5d
Author: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Date: Thu Mar 28 17:34:22 2024 -0400
Modify APP based on RUN (#2413)
There is a need to change which coupled components are on depending on
the current `RUN`. To facilitate this, the `APP` is modified prior to
the setting of the `DO_<component>` variables based on `RUN`, turning
off components as desired.
This new system also replaces the `DO_<component>_ENKF` switches that
were formerly used to turn components off for the ensemble.
Also expands allows apps for cycled to include S2SWA.
Resolves #2318
commit 3ff7a92c25564ddf984cb09cb5667ae8fafe01a0
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Thu Mar 28 17:48:00 2024 +0000
Fix post log arg check and don't create build semaphore (#2440)
Two Hot Fixes to Jenkins latest updates:
1. Logic fixed in checking for mutually exclusive use of gists and repo
for publishing error files
2. Removed creation of build success file semaphore forcing complete
rebuild as the default behavior for rerun/restarts
Co-authored-by: TerrenceMcGuinness-NOAA <terry.mcguinness@noaa.gov>
Co-authored-by: terrance.mcguinness <terrance.mcguinness@noaa.gov>
commit d6be3b5c3a1b8fd025a303b40e0660e2914906a7
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Wed Mar 27 20:56:18 2024 -0600
Update global-workflow and subcomponents to Hera/Rocky 8 partition (#2421)
This PR addresses issue #2329. The following is accomplished:
- All submodule RDHPCS Hera stacks are updated to be compatible with the
Rocky-8 distro spack-stack;
- The global-workflow version files `versions/build.hera.ver` and
`versions/run.hera.ver` are updated for Rocky-8;
- All submodule hashes have been updated to be compliant with the
Rocky-8 distro spack-stack (see the reference PRs below);
- Update to `parm/config/config.base` is made for not yet compliant
packages;
- Relevant updates are made to `modulefiles/module_base.hera.lua` and
`modulefiles/module_gwsetup.lua`.
Resolves #2329
Refs: [#958](https://github.com/NOAA-EMC/GDASApp/issues/958)
[#49](https://github.com/NOAA-EMC/gfs-utils/issues/49)
[#124](https://github.com/NOAA-EMC/GSI-Monitor/issues/124)
[#31](https://github.com/NOAA-EMC/GSI-utils/issues/31)
[#2167](https://github.com/ufs-community/ufs-weather-model/issues/2167)
[#2143](https://github.com/ufs-community/ufs-weather-model/issues/2143)
[#913](https://github.com/ufs-community/UFS_UTILS/issues/913)
Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com>
Co-authored-by: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
commit 47302153f13f6b23539be841b78ed78664599c08
Author: Travis Elless <113720457+TravisElless-NOAA@users.noreply.github.com>
Date: Wed Mar 27 21:14:57 2024 -0400
Add a rotating subset of members for early-cycle enkf (#2427)
The early-cycle EnKF needs the ability to run with fewer members than
the late-cycle due to operational resource constraints. Because of this
requirement, the introduction of a rotating subset of member first-guess
states used by the early-cycle ensemble is also needed in order to
preserve the rotating member initial condition functionality currently
used by the GEFS.
Co-authored-by: Travis J Elless <telless@Orion-login-1.HPC.MsState.Edu>
Co-authored-by: travis elless <travis.j.elless@dlogin07.dogwood.wcoss2.ncep.noaa.gov>
commit 94c282ef6fdcd47076e932bcadb5bdd55236aa05
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Wed Mar 27 20:28:15 2024 +0000
Uploading error logs to GitHub from Jenkins CI Runs (#2429)
This PR enhances the user experience within GitHub for when errors occur
during build and running of CI cases from within the PR messages. This
is done by uploading the error logs to GitHub Gists and then publishing
the links to them along with the full paths of the logs on disk.
This PR adds the python Class **GitHubPR** in
`${HOMEgfs}/ci/scripts/utils/githubpr.py` by inhearting the GitHub Class
from **pyGitHub**. We use this module to introduce a helper python
utility that can publish a list of log files into a GitHub Gist and/or
the designated branch **error_logs** in the **emcbot** repo
**ci-global-workflows** for storing error log files for review from any
git configured terminal. This upload feature will also create
persistence of errors over time.
Also the `build_all.sh -k` script has been updated to support a "quick
kill" feature (thanks David) that stops the parallel builds whenever one
fails and creates an error_log file that has the paths to the error
files that are also uploaded and published in the PR messages in GitHub.
Co-authored-by: TerrenceMcGuinness-NOAA <terry.mcguinness@noaa.gov>
Co-authored-by: terrance.mcguinness <terrance.mcguinness@noaa.gov>
Co-authored-by: DavidHuber <david.huber@noaa.gov>
Co-authored-by: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
commit 6c5065e2e83a45b14505e7575aa4500482ef7452
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Wed Mar 27 03:39:16 2024 -0400
Add option to use traditional threading in the UFS (#2384)
# Description
This PR:
- adds the option of running the ufs-weather-model with traditional
threading in addition to ESMF-managed threading. See new toggle
`USE_ESMF_THREADING=YES|NO` set in `config.fcst`
- does not change the current default of using ESMF-managed threading.
Traditional threading use might need a little more fine tuning for the
job-card specification. This will be achieved when the UFSWM RT
completely switches over to traditional threading
- updates the hash of the ufs-weather-model to the PR
https://github.com/ufs-community/ufs-weather-model/pull/2172
Resolves #2277
In addition to the above stated objectives, this PR also addresses open
issues. In particular, this PR:
- adds a newline at the end of `diag_table_aod`. Fixes #2407
@zhanglikate
- reserves more memory on WCOSS2 for offline UPP when running at C768.
Fixes #2408 @WenMeng-NOAA
Co-authored-by: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
commit bc1c46dfd7393c5164abcdc2dfa76a9c4bc834b8
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date: Tue Mar 26 22:27:30 2024 -0400
Correct GDASApp paths (#2435)
The changes in this PR
- account for changes in GDASApp directory structure
- generalize how the path to the GDASApp python ioda library is
specified
Resolves #2434
commit f0b912be6f2cf2fac590272253f19cb082fbf5f2
Author: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Date: Mon Mar 25 21:46:32 2024 +0000
Fix *earc jobs where the number of members isn't a multiple of 10 (#2424)
This limits the earc search for ensemble members to the maximum number
of members, which prevents attempting to send non-existent members to
HPSS if the number of ensemble members is not a multiple of 10.
Resolves #2390s
commit daeb0c855017f8ffd6f06870744b825b276097f3
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Fri Mar 22 17:40:04 2024 +0000
hotfix to update full path to error logs on CI case fail (#2425)
This hotfix PR prepends the full path to the error logs on disk to be
communitated correctly to the GitHub message to the PR that is being
processed when there is a failure in from a case.
commit 50f75526549245f2b5d984cdb44e402852e086ec
Author: YaliMao-NOAA <53870326+YaliMao-NOAA@users.noreply.github.com>
Date: Thu Mar 21 16:58:25 2024 +0000
Add WAFS jobs, scripts and ush to GFS v17 workflow repository (#2412)
# Description
This PR adds WAFS jobs, scripts and ush to GFS v17 workflow repository
---------
Co-authored-by: yali mao <yali.mao@clogin04.cactus.wcoss2.ncep.noaa.gov>
Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com>
Co-authored-by: yali mao <yali.mao@clogin09.cactus.wcoss2.ncep.noaa.gov>
commit 03ba78ae3df589211d2776254c6e8584ecdc226f
Author: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Date: Thu Mar 21 13:33:50 2024 +0000
Hotfix: send the correct number of build jobs for the UFS (#2423)
This fixes a bug in build_ufs.sh that was causing the UFS to always
build with 8 jobs (except on the cloud).
commit 4d1bf5266f00b35778ea47896f438e3ef612628d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Mar 20 14:00:31 2024 -0400
Updates to RTD documentation (#2418)
Updates to the RTD documentation include:
- Textual updates
- Better definition of GDA subfolder structure
- Added note about GDAur having been discontinued
- Adjust copyright and author information
- Fix Git version table and update its contents
- Add "Table of Contents" header before table of contents on front page
- Add AWS ICs path to init page
- Add link to UFS_UTILS gdas_init RTD documentation
- Add note about bash to `gw_setup.sh` section and added a warning block
Refs #2395
commit afe874ee8b28942e459796cd1005ec598458a5b7
Author: Neil Barton <103681022+NeilBarton-NOAA@users.noreply.github.com>
Date: Tue Mar 19 14:35:02 2024 -0400
Add GEFS Ocean Perturbation Options (#2385)
This PR adds the MOM6 ocean perturbation options when running GEFS. This
is needed for GEFS reforecasts and GEFS operational forecasts.
This PR continues to address the below issues
https://github.com/NOAA-EMC/global-workflow/issues/1720
https://github.com/NOAA-EMC/global-workflow/issues/1921
Fixes #2403
commit fa855baa851b0cb635edd1b9ae1bfed5112d41e5
Author: Clara Draper <33430543+ClaraDraper-NOAA@users.noreply.github.com>
Date: Mon Mar 18 12:49:14 2024 -0600
Add initial GSI-based soil analysis capability (#2263)
First set of changes for adding the new soil analysis, from the
assimilation of screen-level T and q. The changes here enable the
screen-level observations to be assimilated in the Hybrid (Var and EnKF)
update, and the soil temperature and soil moisture updates to be made in
the EnKF only. The functionality is turned on by setting GSI_SOILANAL to
YES in config.base.
Resolves #1479
commit e9700d84b521907ee23e1584712f80e25e60f08e
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Mon Mar 18 09:32:13 2024 -0400
re-enable ci/cases/pr/C48mx500_3DVarAOWCDA.yaml (#2405)
Updates to re-enable C48mx500_3DVarAOWCDA CI test after it was disabled
in https://github.com/NOAA-EMC/global-workflow/pull/2371
Fixes github.com/NOAA-EMC/global-workflow/issues/2404
commit 3ccffeee120340ab580fc9d96b552970c9f42a8f
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Mon Mar 18 09:30:35 2024 -0400
Parse jediyaml only once (#2387)
`JEDIYAML` was being parsed 3 times; once in `get_obs_dict`, second in
`get_bias_dict` and a third time in `initialize` for the specific
component analysis task.
This PR:
- eliminates the duplications and constructs the `jedi_config`
dictionary just once. The dictionary is written out before calling the
executable.
- updates hash to gdasapp
- updates configs for snow, aerosol, atmvar and atmens JEDI-DA to
include `JEDI_FIX_YAML` and `CRTM_FIX_YAML` . This allows greater
flexibility and control over the contents of these fix data sets to be
copied into the run directory.
- Combines snowDA and aerosolDA into a single test
Co-authored-by: Cory Martin <cory.r.martin@noaa.gov>
Co-authored-by: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
commit a5f24951c5bef142747c6f6cc6abd474f0b53ac2
Author: CatherineThomas-NOAA <59020064+CatherineThomas-NOAA@users.noreply.github.com>
Date: Fri Mar 15 14:47:54 2024 -0400
Fix ensemble archive groups to include all members (#2402)
The number of groups used in the ensemble archive step (earc) needs to
include a task for the ensemble stat files such as the mean and the
spread, resulting in `n_groups+1` tasks for `earc`.
Resolves: #2390
commit 056cfdca9e7fd7426a315fcbffc38d8ee2891212
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Fri Mar 15 18:30:23 2024 +0000
GitHub message error paths (#2401)
Add feature to message paths to error logs of failed experiments to
GitHub Messaging the PR from Jenkins.
commit d897ee4936d62160811d936248c8555187f81b65
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Thu Mar 14 12:37:49 2024 -0400
Missed a comma from the hotfix this AM (#2399)
This PR is a hotfix to the hotfix from earlier this AM. A comma was
missing.
commit 906540acacf1b2ce4c0489d0d9d4913f53a4e8ad
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Thu Mar 14 10:40:03 2024 -0400
Fix KeyError issue in ocean/ice postprocessing job. (#2398)
The jjob for ocean and ice pp, only defines the component specific
history and grib directory. This causes an error in the exscript trying
to pull keys for both ocean and ice. Fix this. Surprised this has not
caused failures before today
Co-authored-by: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
commit c27f243ce24c60261718f15628f6ab30d7b09f7b
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Wed Mar 13 13:31:57 2024 -0400
Remove documentation about generating ICs using global-workflow (#2397)
Removes instructions on generating ics using global-workflow and
directs the user to use ufs-utils.
commit 0edbdc197441582f9c402da0f3a7f144b88960c7
Author: DavidNew-NOAA <134300700+DavidNew-NOAA@users.noreply.github.com>
Date: Tue Mar 12 16:30:45 2024 -0400
Changed config.atmanl to allow non-hybrid background error yamls (#2394)
# Description
Makes change so that if DOHYBVAR equals "NO", then the JEDI background
error yaml is set to staticb_${STATICB_TYPE}.yaml.j2 rather than
hybvar_${STATICB_TYPE}.yaml.j2. This allows GDAS to run without hybvar,
which may be necessary for development purposes.
This is all accomplished by a simple switch in config.atmanl.
commit ccb1f528489e740bb2adc4958146552323dd8709
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date: Tue Mar 12 10:45:39 2024 -0400
Add JEDI atmosphere only CI (#2357)
The PR contains a minimal set of changes to enable JEDI atmospheric DA
CI testing. Prototype JEDI atmospheric cycling has begun. The JEDI
atmosphere DA CI case provides an automated way to see if future PRs
impact JEDI atmospheric cycling.
Resolves #2294
Dependency: GDASApp PR
[#937](https://github.com/NOAA-EMC/GDASApp/pull/937)
commit b96f5ebbb1968bd539336652b87a2faa8ce68fd4
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Mar 12 07:58:40 2024 -0400
Add switch to control `debug=true` on WCOSS2 for development testing (#2388)
Adds a switch (`DEBUG_POSTSCRIPT`) to control whether
`debug=true` is set when submitting development rocoto jobs to PBS
schedulers (currently just WCOSS2).
There isn't an equivalent flag to set for SLURM on the RDHPCS.
Have added this new switch to documentation.
Refs #619
commit 02d650500353663d0b193ef14003897daa5dd86c
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Mon Mar 11 21:51:16 2024 +0000
Rewrote pr_list_database.py to use wxflow's SQLiteDB Class (#2376)
This PR updates the `pr_list_database.py` code to use **wxflow**
SQLiteDB Class
- Improved code's readability
- Uses better code style matching project's software culture
- Better docstring standards
Co-authored-by: tmcguinness <terry.mcguinness@noaa.gov>
Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com>
Co-authored-by: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
commit a3374607d01fbdabbec0660afb82b5eb3677b4af
Author: AndrewEichmann-NOAA <58948505+AndrewEichmann-NOAA@users.noreply.github.com>
Date: Fri Mar 8 16:08:42 2024 -0500
Return ocnanalrun npes resource setting back to previous value (#2386)
Variable `npes` in `ocnanalrun` entry of `config.resources` was
erroneously changed in
https://github.com/NOAA-EMC/global-workflow/pull/2299 and this PR
changes it back.
Resolves https://github.com/NOAA-EMC/GDASApp/issues/962
commit d7e9bde84aebe922039589bd2bcd65832c1074eb
Author: BoCui-NOAA <53531984+BoCui-NOAA@users.noreply.github.com>
Date: Thu Mar 7 16:14:28 2024 -0500
Add new BUFR table file parm/product/bufr_ij9km.txt for GFSv17 C1152 (#2383)
This PR will add a new table file parm/product/bufr_ij9km.txt, and
modify ush/gfs_bufr.sh to choose the different bufr table files based on
the GFSv17 run resolution, i.e. use file bufr_ij9km.txt for C1152 or
bufr_ij13km.txt, for C768.
Resolves #2382
commit 4a525bef3bbed2ea60a71f71b3740c82df125c36
Author: AndrewEichmann-NOAA <58948505+AndrewEichmann-NOAA@users.noreply.github.com>
Date: Thu Mar 7 16:12:31 2024 -0500
Add global-workflow infrastructure for ocean analysis recentering task (#2299)
Adds jjob, rocoto script, config file, and basic `config.resources`
entry for ocean analysis recentering task
This PR is a dependency for further work on the associated issue within
global-workflow and GDASApp
Refs https://github.com/NOAA-EMC/GDASApp/issues/912
commit f83d17a937006add55241ed453e42f4fcbae50aa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Mar 7 09:29:14 2024 -0500
Clean out non-gfs top level variables (#2366)
Clean out non-gfs top level variables that are duplicates or no longer needed.
Also standardize how we set these variables in scripts.
Refs #2332
commit c7b306e052497aef0022cd53550a168d2c5b6e5b
Author: Guillaume Vernieres <guillaume.vernieres@noaa.gov>
Date: Wed Mar 6 16:16:08 2024 -0500
Forgotten templated DO_VRFY_OCEANDA (#2379)
# Description
This PR adds the possibility to use the switch for the ocean and sea-ice
DA verify task from the yaml configuration.
- fixes
[GDASApp/issues/954](https://github.com/NOAA-EMC/GDASApp/issues/954)
commit ba6a4fdf6e245b57530f2b20e6f0ccf567115720
Author: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Date: Tue Mar 5 19:09:48 2024 +0000
Add Hercules support for the GSI monitor (#2373)
# Description
This updates the GSI monitor hash and updates the modulefiles to add
support for the monitor on Hercules.
commit 732a874a2c6793296f136afb23545fab9869b181
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Mon Mar 4 16:04:26 2024 -0500
Reformat snowDA templates to jinja2 (#2371)
# Description
This PR:
- replaces use of non-jinja2 templates in the yaml templates.
Specifically `$( )` in favor of pure jinja2.
- uses jinja2's built-in capability to include templates within
templates, thereby allowing to assemble a completely rendered template
before passing it to for e.g. yaml loader.
- requires updates to `wxflow` and `gdasapp`
- Changes in `wxflow` in `parse_j2yaml` are **not** backwards compatible
Additionally, this PR:
- renames `config.base.emc.dyn` to `config.base`. Resolves #2347
commit d1fa41106e991556606b0f62a15bf45f469f4f79
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Sat Mar 2 04:54:26 2024 +0000
Reduce Jenkins messaging to GitHub (#2370)
This PR updates the Jenkins Pipeline code with safeguards against the
errors caused when Jenkins fails to authenticate with GitHub to message
or update a label. This was achieved simply by:
- Reducing the number out messages sent to the GitHub PR
- Putting try blocks around most of the update label calls
Co-authored-by: tmcguinness <terry.mcguinness@noaa.gov>
commit 52fa3cb32d8b50e47f391b82ea8901435fc88aff
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Fri Mar 1 12:36:27 2024 -0700
Adding debug option for all build scripts (#2326)
This PR addresses issue #300 that allows building in `debug` mode.
Co-authored-by: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com>
commit 91738cbf871d8cdce46912e2c11e304d567a2aae
Author: DWesl <22566757+DWesl@users.noreply.github.com>
Date: Fri Mar 1 13:46:42 2024 -0500
Sort list of coupler restart files for restart time determination (#2360)
The loop in the following conditional seems to assume the list is
sorted, so make that explicit in the array construction.
commit 23c25527ad2a62275cd9105bd103b8520a28e573
Author: Neil Barton <103681022+NeilBarton-NOAA@users.noreply.github.com>
Date: Fri Mar 1 13:45:39 2024 -0500
Update stage IC to handle ocean perturbations (#2364)
This PR adds the option to stage ocean perturbation files for ensemble
forecasts. These perturbation files are used in GEFS forecasts.
A new variable is introduced in config.base to use the ocean
perturbation files.
This PR does not include using these perturbation files. A future PR
will address this.
commit 8efe05f475b81e7cf6376745d5f1ce31987cb4eb
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Fri Mar 1 07:41:56 2024 -0500
Turn on C48mx500_3DVarAOWCDA test on hera (#2363)
This PR activates the C48mx500_3DVarAOWCDA test on hera. This required
an update of the gdas app.
commit 5166593945e9ecc04dfa3409752576c08797d09f
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Thu Feb 29 20:14:41 2024 +0000
Move Jenkinsfile into ci subdirectory (#2355)
Just moves the Jenkinsfile into the ci directory
Co-authored-by: tmcguinness <terry.mcguinness@noaa.gov>
commit b7af315bb9dea77b37c6d030b71060b87bedf33e
Author: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Date: Wed Feb 28 22:20:58 2024 +0000
Fix rocoto forecast hour determination for GEFS (#2351)
The function that generates the list of forecast hours for rocoto was
trying to use variables that are not defined for GEFS, causing workflow
generation to fail. The function is updated to not try to load these
variables before loading the ones actually used for GFS/ GEFS.
Also turns GEFS CI test back on and adds an entry to stage C192 ICs
(note: these have not been placed in the centralized location.)
commit d3a49271b6c3816a9feeb7f6fb474797bacf1d7e
Author: Cory Martin <cory.r.martin@noaa.gov>
Date: Wed Feb 28 09:38:49 2024 -0500
Rename the land DA jobs to snow DA to better reflect what they are doing (#2330)
This PR renames all of the land DA jobs to snow DA to better reflect
that this is a JEDI-based snow analysis capability and not a more
generic land surface analysis.
commit 2693810d6ea9d9b20090777ff3a98e3d072c76d7
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Tue Feb 27 01:25:51 2024 -0500
Update ufs-waether-model hash (#2338)
Routine update of ufs-weather-model hash.
Other small updates:
* removes comment referencing closed issue.
* Updates the CICE diag frequency to once per day as recommend here:
https://github.com/NOAA-EMC/global-workflow/issues/1810#issuecomment-1686278925
* Updated amount of time for C384 gdas forecast as it was running out of
time
* Removed unused variable wave_sys_ver
commit 9608852784871ebf03d92b53bde891b6dcab8684
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date: Mon Feb 26 14:10:01 2024 -0500
Update JEDI ATM to use .nc for obs and generalize x,y layout (#2336)
# Description
The changes in this PR are twofold
1. replace `.nc4` suffix for JEDI ATM observation related files with
`.nc`
2. use templated variables to specify `{layout_x, layout_y}` for JEDI
ATM variational and local ensemble apps
The first change conforms with the Unidata recommendation that netCDF
files end with the suffix `.nc`. The second change replaces hardwired
JEDI ATM var and ens `{layout_x, layout_y}` in `config.resources` with a
more flexible approach.
Resolves #2335
commit c5c84660f10f0ef9ce939231b2f7fda498b39a29
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Feb 26 10:18:50 2024 -0500
Remove FIX* variables for fix subfolders (#2337)
Remove `FIX*` variables for fix subfolders and replace them with the remaining `FIXgfs` variable and the subfolder name (e.g. `${FIXam}` -> `${FIXgfs}/am`).
The UFS_UTILS and GDASApp repos were similarly updated. This PR includes a new UFS_UTILS hash.
The updated GDASAPP hash was already committed within the spack-stack/1.6.0 PR #2239.
Resolves #2184
commit 950c38a093c6a4e2b67e18c76390280d8bfbaef7
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Fri Feb 23 21:15:46 2024 +0000
Fix several Jenkins issues (#2334)
Jenkins Updates Resolving final kinks:
- Removed all `git` shell commands and now exclusively use Software Control
Manger (**scm**) plugin.
- Add feature for skipping hosts per configuration specified in case yaml files.
- Solved and tested false positive builds and experiments.
- Tested archiving of task error log on case fail
- First case fail quits pipeline and cancels all pending scheduled jobs
- Duel build per yaml configuration arguments supported
- All designated case files in PR directory pass on intended host (fully tested
on Hera)
Remaining updates:
- Fist build fail short circuit when building sub-modules and archiving build
error log.
- Re-build/no-build built in logic for Replay and Rerunning previously failed
experiments.
commit c67393a203285792b852da0d83fd10fa47155669
Merge: 6f9afff07 79d305e8c
Author: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Date: Fri Feb 23 14:18:15 2024 +0000
Merge pull request #2239 from DavidHuber-NOAA/ss160
Update to spack-stack 1.6.0
Includes all submodules except the UFS, which will be updated at a later time.
commit 79d305e8cbc339208ea6fe0475ddc56af94a285b
Author: David Huber <david.huber@noaa.gov>
Date: Thu Feb 22 14:53:57 2024 -0600
Disable snow DA tests
commit 0459203e97211b041520b39e93a188951396ba33
Author: David Huber <david.huber@noaa.gov>
Date: Thu Feb 22 12:55:51 2024 -0600
Update GDASApp hash to current develop
commit 5c96eb2272fe6117f9e4a4c0c790db58e4870d46
Author: David Huber <david.huber@noaa.gov>
Date: Thu Feb 22 12:37:47 2024 -0600
Update GDAS hash to allow modified snow DA analysis
commit 79144f2403a33d08140577cc3e8a61d6c4924403
Merge: abbb0b8a7 6f9afff07
Author: DavidHuber <david.huber@noaa.gov>
Date: Thu Feb 22 15:14:39 2024 +0000
Merge remote-tracking branch 'origin/develop' into ss160
commit abbb0b8a76b39d34433802fd4e3d7973fb9f0a39
Merge: 4ad837ea1 4529e8cf3
Author: DavidHuber <david.huber@noaa.gov>
Date: Thu Feb 22 15:11:03 2024 +0000
Merge remote-tracking branch 'henry/feature/gwdev_issue_2129' into ss160
commit 4ad837ea157b98d2bd173cb696c4d30d142e5540
Merge: 516b2a270 7ca45db8f
Author: DavidHuber <david.huber@noaa.gov>
Date: Thu Feb 22 15:10:24 2024 +0000
Merge remote-tracking branch 'henry/feature/gfsv17_issue_2125' into ss160
commit 516b2a270234bdab5714ef2705c83dd3835b134d
Author: DavidHuber <david.huber@noaa.gov>
Date: Thu Feb 22 14:19:16 2024 +0000
Updated GDAS to include rocoto/1.3.6 on Hera.
commit 6f9afff073dd589096f992a3448fb7f0e62c9804
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Wed Feb 21 13:09:44 2024 -0500
Add some flexibility for ocean/ice output (#2327)
This adds functionality to have ocean/ice output frequency be separate from the atm model. One time was created because there's an assumption in the post that these are the same. This could be further modified to remove this assumption.
Refs #1629
commit f6d3015ab9f9fd23ce0081baa2edbc5d9f5f3e16
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 09:53:08 2024 -0600
Update GDASApp hash to include SS/1.6.0 support.
commit 0bf340bce2f865c582e5305f0c5984cd3affe74e
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 09:07:32 2024 -0600
Construct SS paths from version variables.
commit 3330cd7310bde8090b68720c225656074676d6b2
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 09:06:19 2024 -0600
Removed MET/METplus 'not available' comments
commit fdc638ca1616b347912caec77e5abc2d3e6f18af
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 08:35:15 2024 -0600
Move SS module path to version files.
commit d7d28a6b65b84c8d821abd2c13d0c068bd5ad6d8
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 07:53:15 2024 -0600
Update comment about METplus support.
commit a812f88af3fc043d57494840e81a7527723858e4
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 07:45:45 2024 -0600
Update verif-global to latest WCOSS2 support.
commit d81f07fbf53666a37ab01bd463152e10252869ae
Author: David Huber <david.huber@noaa.gov>
Date: Tue Feb 20 07:41:38 2024 -0600
Clean up build_upp.sh.
-Corrected whitespace (tabs instead of spaces)
-Removed debug print statement
-Alphebetized flags
commit ae7eb194cbe2213e564807dd7bc03a28d493eff2
Author: David Huber <69919478+DavidHuber-NOAA@users.noreply.github.com>
Date: Fri Feb 16 16:15:40 2024 -0500
Fix whitespace in build_upp.sh.
Co-authored-by: Rahul Mahajan <aerorahul@users.noreply.github.com>
commit 48b34d0f388a398bb91f7c3b1e5f8338f4beb7b9
Author: David Huber <david.huber@dlogin05.dogwood.wcoss2.ncep.noaa.gov>
Date: Fri Feb 16 20:56:55 2024 +0000
Added verif-global support back to WCOSS2.
commit 4529e8cf3736ffbacf615a27e99f4d1beec391aa
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Fri Feb 16 11:12:01 2024 -0700
Bug fix.
commit 8e4f94d13d32849b2862a9d59aa070f4103c61ae
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Fri Feb 16 11:04:41 2024 -0700
Updates requested by reviewer Rahul Mahajan.
commit 4624ce21c99ab303afa10c1dd8ddcce7b6f715ca
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Fri Feb 16 10:52:11 2024 -0700
Updates requested by reviewer; testing -- DO NOT REVIEW.
commit ed25bbd0b26a893d32ce4a10b368dec2bb722424
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Fri Feb 16 09:33:59 2024 -0700
Linter corrections.
commit 6a0b7bf214815c13eec98a93bd3abe9978de04e4
Merge: f9fb64ef8 2415b7b4f
Author: David Huber <david.huber@noaa.gov>
Date: Fri Feb 16 09:50:22 2024 -0600
Merge branch 'ss160' of github.com:DavidHuber-NOAA/global-workflow into ss160
commit f9fb64ef802b683d7b369f8e8268d423ab581481
Merge: 777d97d3a a23b7f2fd
Author: David Huber <david.huber@noaa.gov>
Date: Fri Feb 16 09:49:42 2024 -0600
Merge remote-tracking branch 'emc/develop' into ss160
commit 7ca45db8fa32c84ef117ff2938a650822c81a786
Merge: 73bc76bfd a23b7f2fd
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Fri Feb 16 07:46:35 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gfsv17_issue_2125
commit eb2ed53857eb3387735488a1ce5d701ff680e3db
Merge: 9929277dc a23b7f2fd
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Fri Feb 16 07:46:24 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gwdev_issue_2129
commit a23b7f2fdca5be700d257e28052a0104f2173a0f
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date: Fri Feb 16 09:37:58 2024 -0500
Add JEDI 3DEnVar atmosphere only CI test stub (#2309)
commit cf83885548bb3a6740c033f42479ce2ad283a4a9
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Fri Feb 16 01:55:02 2024 -0500
Add unstructured grid for HR3/GFS (#2230)
This adds the capability to use unstructured grids in the global workflow,
which will be used in HR3. There are new fix files for a low-resolution
100km grid and a grid closer to our targeted GFSv17 grid which has the
resolution combined from the older multi_1 and GFSv16 grids.
The fix file update is here: NOAA-EMC/global-workflow#2229
Note: This now means that GFS tests need a new build option:
`./build_all.sh -w` So that PDLIB=ON is turned on for compiling relevant
UFS and WW3 codes.
Resolves NOAA-EMC/global-workflow#1547
commit 9929277dc7d0ad90f5366faf4b5f2278969a0aa2
Merge: eb8791ccb 094e3b86d
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Thu Feb 15 15:05:50 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gwdev_issue_2129
commit 094e3b86da44f1d3fc1d99f68f6fdfcd36deb09f
Author: Cory Martin <cory.r.martin@noaa.gov>
Date: Thu Feb 15 14:43:55 2024 -0500
Move IMS remapping files from COM_OBS to FIXgdas (#2322)
* Add in IMS obs fix directory and update submodule for gdas
commit d465ea06e8b2a8f3a5eb1120647c1e2ce5197d66
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Thu Feb 15 19:25:02 2024 +0000
Set HOMEgfs for module_setup in CI driver (#2321)
Hotfixes to CI Bash system from updates with sourcing
`detect_machine.sh` in `ush/module-setup.sh` using **HOMEgfs**.
commit 2415b7b4f3e6c376aca27707510001141cc9dd92
Author: David Huber <david.huber@noaa.gov>
Date: Thu Feb 15 19:21:17 2024 +0000
Load default rocoto on Jet.
commit eb8791ccbe684828dc529d0e553551969274fc22
Merge: 60d5ee64b 638684e0b
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Thu Feb 15 11:56:40 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gwdev_issue_2129
commit 777d97d3a1c9f5ec5e8af3ca40a41224ec7099a1
Author: David Huber <david.huber@noaa.gov>
Date: Thu Feb 15 12:34:59 2024 -0600
Fixed Orion cdo version.
commit ef0723503c72f295de93521c7102c43e75c47417
Author: DavidHuber <david.huber@noaa.gov>
Date: Thu Feb 15 16:29:32 2024 +0000
Revert UFS hash.
commit 0ce8c0dbc13227884fef1c637e93616a28c68d34
Author: DavidHuber <david.huber@noaa.gov>
Date: Thu Feb 15 14:55:48 2024 +0000
Fix git version in Hera's gwsetup module.
commit 3080a34253e8e24105bf2be72b6a872b1c072935
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Feb 14 20:52:34 2024 +0000
Fixed xarray version for SS/1.6.0.
commit 49392dd47ff84b6586052aeae6879d7d8050b746
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Feb 14 20:29:41 2024 +0000
Updated GSI-Utils hash to head of develop.
commit c3553f0d8e6a05c6234e7c14a179983aa44fd6f3
Merge: 4568653a6 638684e0b
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Feb 14 20:28:14 2024 +0000
Merge remote-tracking branch 'origin/develop' into ss160
commit 4568653a67aa37c902379db628fb10f69fe7190f
Author: David Huber <david.huber@noaa.gov>
Date: Wed Feb 14 14:22:13 2024 -0600
Reupgrade Hercules to SS/1.6.0
commit 638684e0bfcd06700cc8695f09824891a0a1eee1
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Feb 14 14:55:21 2024 -0500
Remove `finddate.sh` from system (#2308)
* Retire finddate.sh usage from system
* Update gfs-utils hash to 7a84c88 - New hash includes removal of finddate.sh
Refs #2279
commit 2b160f8470bed16c513ca4a5665e2b6d4448c50e
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Feb 14 18:31:28 2024 +0000
Reenable METplus jobs on Hercules.
commit 8f5900265a31e894060bbe9c89b262f4df0b1760
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Feb 14 18:30:23 2024 +0000
Update GSI hashes.
commit 73bc76bfd47f2cff54df55e15d9ed8969683367d
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Wed Feb 14 09:27:37 2024 -0700
Updates based on user request.
commit e4bc674cf3b2df10e0b0dfd50a8ecb0f4f7825d8
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Wed Feb 14 08:03:45 2024 -0700
Corrected based on reviewer review.
commit 60d5ee64bda7a16c1f2dc20c8badcd7c8fc4e592
Merge: 40f2cf6cd 1aaef05d3
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Tue Feb 13 18:08:33 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gwdev_issue_2129
commit 03304112347a673b7a0fcc404703bb10960bc47a
Merge: 929b90330 1aaef05d3
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Tue Feb 13 17:58:12 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gfsv17_issue_2125
commit 1aaef05d317cd1eec548ef2b9842679c531cef8b
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Tue Feb 13 18:15:59 2024 -0500
Jenkins Pipeline updates for Canceling Jobs (#2307)
Tuning updates for Jenkins Pipeline :
- Added short circuit for all parallel runs of cases on error of any
- Fixed canceling of all scheduled jobs on first case error
- Added feature to save error log files to Jenkins Archive facility on fail
commit 64048926627f8c9edb087de286095e3b93a214c2
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Tue Feb 13 14:57:37 2024 -0500
Ocean/ice product generation for GFS and GEFS (#2286)
This PR does several things:
1. the model output for ocean and ice in the `COM/` directory are now
named per EE2 convention for coupled model.
E.g `gfs.ocean.t12z.6hr_avg.f120.nc` and `gfs.ocean.t12z.daily.f120.nc`
2. The products are generated using the `ocnicepost.fd` utility developed
by @DeniseWorthen in https://github.com/NOAA-EMC/gfs-utils and
converted to grib2 using example scripts provided by @GwenChen-NOAA
using `wgrib2`.
3. NetCDF products on the native grid are also generated by subsetting
variables from the raw model output. This is done with `xarray`.
4. updates the hash of https://github.com/NOAA-EMC/gfs-utils to include
fixes in `ocnicepost.fd`
5. removes NCL related scripting that was previously used for ocean/ice
interpolation and `reg2grb2` used for converting to grib2.
6. updates archive scripts to accommodate updated file names
7. removes intermediate ocean processed files such as 2D/3D/xsect data-
sets
8. separate jobs are added for ocean and ice product generation.
9. removes intermediate restarts for the mediator and only saves the medi-
ator restart at the end of the forecast in `COM`.
10. Increases memory for offline UPP when run at C768. The program
segfaults with an OOM when memory is self allocated based on PEs by
the scheduler on Hera.
11. Enables ocean/ice ensemble product generation for GEFS
12. Some minor clean-ups
Fixes #935
Fixes #1317
Fixes #1864
commit 40f2cf6cd70ac94e01babc96982f37ae1b0c7e79
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Tue Feb 13 10:18:53 2024 -0700
Implemented ush/detect_machine.sh for host determination and removed redundant checks for expected file paths.
commit 929b90330c7eb345011c2c850915e0004ca26b11
Merge: 2d08d015a 3f99f700c
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Tue Feb 13 08:31:06 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gfsv17_issue_2125
commit 3f99f700c987526c8eb754b3f4c7b698b3e9b1dc
Author: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Date: Tue Feb 13 00:57:18 2024 -0500
Add wave post jobs to GEFS (#2292)
Adds the wave post jobs for gridded and points to GEFS. Boundary
point jobs are added even though the current GEFS buoy file does
not contain any (tested by manually subbing in the GFS buoy file).
Resolves #827
commit 842adf38087aec9f1c0bca9567e4b11d494e14c7
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Mon Feb 12 12:50:08 2024 -0500
Added additional test cases to the pr list in Jenkins (#2306)
C48mx500_3DVarAOWCDA, C96C48_hybatmDA, and C96_atmsnowDA
Co-authored-by: terrance.mcguinness <terrance.mcguinness@noaa.gov>
commit bb4ca65fe5524f76e40b97346339f1dda6680ce1
Author: CatherineThomas-NOAA <59020064+CatherineThomas-NOAA@users.noreply.github.com>
Date: Mon Feb 12 14:50:41 2024 +0000
Redo v16.3 config.base changes for DA increments (#2304)
Include the additional hydrometeors to the
INCREMENTS_TO_ZERO and INCVARS_ZERO_STRAT
variables in config.base that were modified
in v16.3.
Resolves: #2303
commit 061992bb6160554430cf688adf6184f01b732098
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Sat Feb 10 01:33:36 2024 -0500
Fix Jenkins success reporting (#2302)
Moving the post section back outside of main Run Experiments
stage. This allows the system to correctly report the **Success**
status until after all tests pass.
_Had originally moved them in attempts to solve "Not an SCM
GitHub Job" issue and cause the reporting to misbehave._
Also ran through Jenkins linter and updated some messaging
that was incorrectly reporting system build type.
commit 28ccf78073a20ba1e4d3b379d164109b54ff6708
Merge: b972f66fc 54daa31ce
Author: David Huber <david.huber@noaa.gov>
Date: Fri Feb 9 14:00:43 2024 -0600
Merge remote-tracking branch 'emc/develop' into ss160
commit b972f66fc924790c48f38d395e7141fa78ef9d90
Author: David Huber <david.huber@noaa.gov>
Date: Fri Feb 9 10:47:00 2024 -0600
Fix SS versions for CI modules.
commit 4b01d8eeca26c3b3d843a4b1e7b1618f281de68f
Author: David Huber <david.huber@noaa.gov>
Date: Fri Feb 9 10:44:30 2024 -0600
Revert Hercules modules to SS/1.5.1.
commit 54daa31ce0a3c23d4d74def5e54436a39a899ed4
Author: TerrenceMcGuinness-NOAA <terrence.mcguinness@cox.net>
Date: Thu Feb 8 15:48:38 2024 -0500
Jenkins Declartive Pipeline for CI with gfs/gefs multibuilds (#2246)
Adding top level Jenkins file for CI tests running on Jenkins Controller:
- Declarative Multi-branch Pipeline (has enhanced restart capabilities
on a per section bases)
- Starts Pipeline from Label PR same as BASH system (for now)
- Progress and restarts can me managed with CAC Login at [EPIC OAR
Jenkins](https://jenkins.epic.oarcloud.noaa.gov)
- Has logic for multi **gfs/gefs** system builds (arguments based on a
configuration file `ci/casts/yamls/build.yaml`)
- Any number of **systems** may be added by manual adding an ele-
ment to the matrix in the Jenkinsfile
- _It may be possible to dynamic add matrix values with a specialty
plug-in_
- Currently only runs on **Orion** and **Hera** using `mterry` account
Resolves #2119
Resolves #2118
commit 43429e23c12c1f2050b3a3f356abdec98dc73ea0
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Thu Feb 8 15:30:28 2024 -0500
Enable AO WCDA test (#1963)
This PR:
- adds GSI + SOCA C48 5-deg ocean 3DVar test (courtesy @guillaumevernieres)
- adds a toggle to optionally disable ocnanalvrfy job.
commit 2d08d015afb9c850577efd9754add16b10c45ae6
Merge: 4745d4a06 f56352874
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Thu Feb 8 07:24:54 2024 -0700
Merge branch 'NOAA-EMC:develop' into feature/gfsv17_issue_2125
commit f56352874d6dc133a4f1181f77c8f91ca38a6416
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Feb 7 15:09:12 2024 -0500
Update JGLOBAL_FORECAST for octal error (#2295)
Add "10#" to ENSMEM value > 0 check to handle octal errors.
commit 4745d4a06148cc6c702c647e12ede4875e3a5862
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Wed Feb 7 08:45:49 2024 -0700
Removed jlogfile references.
commit 5894ca2bf11e8ab7910c69781a9fbe51352a7e8c
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Wed Feb 7 08:32:16 2024 -0700
Removed dummy variable passed to perl scripts.
commit dae884a7c48b4a30c1844685c3d0ef50c9b78344
Author: henrywinterbottom-wxdev <henry.winterbottom.wxdev@gmail.com>
Date: Wed Feb 7 08:29:49 2024 -0700
Removed jlogfile and postmsg references within gempak scripts.
commit 801058ffb0cbbfe101fd5b686aed79c5bf7538c1
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Wed Feb 7 00:41:59 2024 -0700
Consolidate `npe_node_max` (#2289)
- The environment variable `npe_node_max` is removed from all
files beneath `global-workflow/env`;
- The environment variable `npe_node_max` is removed from
`parm/config/gefs/config.ufs` and `parm/config/gfs/config.ufs`;
- The environment variable `npe_node_max` is maintained only
within `parm/config/gefs/config.resources` and
`parm/config/gfs/config.resources`.
Resolves #2133
commit b0325e0157598702cbba6c3cc09af0120881e2b4
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Wed Feb 7 00:40:20 2024 -0700
Removes files module loading file no longer used by the GW (#2281)
Removes `module-setup.csh.inc` and `module-setup.sh.inc`.
The module `ush/module-setup.sh` is updated such that it now sources
`ush/detect_machine.sh` to determine which supported platform the
global-workflow is being execute on.
Resolves #2130
commit 1ccc9896b361f2aaef8e6e7592a06ae4cfb7c491
Author: Walter Kolczynski - NOAA <Walter.Kolczynski@noaa.gov>
Date: Mon Feb 5 14:16:07 2024 -0500
Remove EnKF forecast groups (#2280)
Removes the grouping of EnKF forecasts so each job only runs
one forecast. Member and MEMDIR are now set at the workflow
manager (rocoto) level. This change makes much of the system
simpler (especially dependencies) and allows the elimination of
the separate efcs scripts.
Metatask names of updated jobs have been updated to make
them a little less opaque by using the same name name as its
constituent tasks (e.g. the forecast metatask is named
`enkgdasfcst`, not `enkfgdasefcs`). Metatasks that weren't
updated retain the same names as before for now.
Resolves #2254
commit 9f3383fd8d8322428a40b94764a172a16872995e
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Mon Feb 5 12:15:13 2024 -0700
Updated detect_machine.sh using that from UFS WM. (#2252)
Updates `ush/detect_machine.sh` to match the UFS weather-model
`tests/detect_machine.sh` prepared by @BrianCurtis-NOAA
Resolves #2228
commit 7d68b0b164f0ffcd56867ae4fdab67905d9589eb
Author: CatherineThomas-NOAA <59020064+CatherineThomas-NOAA@users.noreply.github.com>
Date: Sun Feb 4 22:02:41 2024 +0000
Update global_cycle for fractional grid (#2262)
The hash for ufs_utils is updated to include the changes for
fractional grid support within global_cycle. This commit also
removes the hack to skip global_cycle in cycling mode with
v17 physics.
Resolves: #1775
Refs: ufs-community/UFS_UTILS#815
Refs: ufs-community/UFS_UTILS#891
commit ed592a6ecfabc0d0b64a6e276531b7bc5ae3b8ea
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Sat Feb 3 02:55:14 2024 -0500
Retire cycle-specific FHMAX_GFS variables (#2278)
This PR retires the `FHMAX_GFS_${cyc}` variables that allowed users to specify
different gfs forecast lengths for each cycle. This function is no longer supported
in global-workflow. The `FHMAX_GFS_*` variables will be removed and will no
longer be checked to set the final `FHMAX_GFS` variable. The same forecast
length will be set for every cycle.
This PR also includes a small fix to add new post parm files into the `.gitignore`
file. This was intended to be included in a different PR but that PR is on hold for
further testing so it is being included here to get it into `develop` sooner.
Resolves #2218
commit 977e2d67b268477321aa26fc56073dd373e4f979
Author: Henry R. Winterbottom <49202169+HenryWinterbottom-NOAA@users.noreply.github.com>
Date: Fri Feb 2 07:49:09 2024 -0700
New GDASApp hash. (#2285)
commit b5f2bd9ec5632c4be43004604eed0e130dfe1735
Merge: 4d667421d 0400e1f35
Author: David Huber <david.huber@noaa.gov>
Date: Tue Jan 30 13:55:00 2024 -0600
Merge branch 'ss160' of github.com:DavidHuber-NOAA/global-workflow into ss160
commit 0400e1f3558be8e34c1298d32e14999c9dd46f8c
Author: David Huber <david.huber@noaa.gov>
Date: Tue Jan 30 09:57:11 2024 -0600
Fix gfs_utils Orion spack-stack env path.
commit 6bbe823e729291db326d108765d3a92a99552a58
Author: DWesl <22566757+DWesl@users.noreply.github.com>
Date: Mon Jan 29 21:15:30 2024 -0500
Use seq to generate the list of times, instead of a bash for-loop (#2264)
I'm running a year-long forecast, which means I get a large portion of the log file dedicated to these loops.
`seq ${START} ${STEP} ${STOP}` will generate a sequence going from START to STOP by STEP, including STOP if relevant. That seems to be the purpose of these loops. It will by default separate the list with newlines, but `seq -s ' ' ${START} ${STEP} ${STOP}` will separate them with spaces instead, more closely mimicing the previous behavior.
I would like this to be two lines in the log, rather than a few hundred, and this may also be faster, though probably more for reasons of fewer writes to disk than because bash isn't designed for arithmetic.
commit d5bee38979cde547861261d1cd150f3a61601d4b
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Jan 29 14:35:02 2024 -0500
Correct typos in GFS config.resources (#2267)
This PR corrects some typos in `parm/config/gfs/config.resources` that were
introduced in PR #2216. The esfc job was failing in tests on WCOSS2 due to
insufficient memory. This lead to discovering the other typos. The esfc job
completes without error after its memory is set back to `80GB` from the
incorrect `8GB`.
Resolves #2266
commit 81557beca9eecd878e7b25b3822e30a4276f4a16
Author: David Huber <david.huber@noaa.gov>
Date: Mon Jan 29 12:13:31 2024 -0600
Update monitor hash to noaa-emc with SS/1.6.0 support.
commit 2238dd6ac0094ba2ff5e1027e964ef29ad33352c
Author: DavidHuber <david.huber@noaa.gov>
Date: Mon Jan 29 13:21:30 2024 +0000
Update Orion, Hercules, S4 modulefiles.
commit 6ffd94fd95f54ceb940f0c9201774ad73fbb055b
Author: DavidHuber <david.huber@noaa.gov>
Date: Fri Jan 26 16:01:23 2024 +0000
Update GDAS hash to include SS/1.6.0 support.
commit be11f85f28cf832e5fbb390fdd387f1bdecb5f82
Merge: 56b968080 04e0772d9
Author: DavidHuber <david.huber@noaa.gov>
Date: Fri Jan 26 15:34:24 2024 +0000
Merge branch 'ss160' of github.com:DavidHuber-NOAA/global-workflow into ss160
commit 8ff344844e28c3b2d03a0356f88b14635f318c12
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Fri Jan 26 10:12:18 2024 -0500
Add a yaml for snow DA testing. (#2199)
- adds a new test yaml C96_atmsnowDA.yaml for 3DVar atmosphere with GSI and Land (Snow) DA with JEDI
- moves a few yamls from platforms/ to yamls/
- adds ability to overwrite a previously created experiment as an addition to user input.
---------
Co-authored-by: Cory Martin <cory.r.martin@noaa.gov>
commit 04e0772d9d3e77ac5a24ce4570d48cb41424a08b
Author: David Huber <david.huber@noaa.gov>
Date: Fri Jan 26 07:16:25 2024 -0600
Update ufs_utils hash for spack-stack/1.6.0 support.
commit 3d44ff38c5c3324c22fc104fe3259b4ac864c6d6
Author: Barry Baker <bbakernoaa@users.noreply.github.com>
Date: Thu Jan 25 14:33:27 2024 -0500
GOCART ExtData biogenic climatology fix (#2253)
Updates the ExtData for biogenic emissions to be climatology rather than
for current time. Fixes an issue which will crash by default for other years.
commit 66f58b8ab1a9524d6be95271f27a06c2f32e5f78
Author: Guillaume Vernieres <guillaume.vernieres@noaa.gov>
Date: Thu Jan 25 13:16:41 2024 -0500
Added missing container case in gfs/config.resources (#2258)
fixes #2257
commit 553b4f2e74ef610115436b75f7f6df100babd8dd
Author: WenMeng-NOAA <48260754+WenMeng-NOAA@users.noreply.github.com>
Date: Thu Jan 25 13:00:45 2024 -0500
Fix post parm links (#2243)
Change symbolic links under parm/post with the latest version of develop branch from UPP repository and enable MERRA2 aerosol fields.
Resolves #2259
commit 4d667421d5eefea2347ea1dd8097e39e167d7201
Merge: 6c058039e afa09e356
Author: David Huber <david.huber@noaa.gov>
Date: Thu Jan 25 07:49:08 2024 -0600
Merge branch 'ss160' of github.com:DavidHuber-NOAA/global-workflow into ss160
commit 6c058039e209c67ea477d37d2d6f76b7a2fa68ac
Author: David Huber <david.huber@noaa.gov>
Date: Thu Jan 25 07:48:42 2024 -0600
Fix wgrib2/gfs_utils on Hercules.
commit ee6f536ea0228c60f5a8bec4037cd6f7ea63b816
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Jan 25 07:43:13 2024 -0500
Update GFS version to v16.3.13 in index.rst (#2256)
GFSv16.3.13 WAFS update was implemented
Refs #2013
commit 2445d44d0d66f35512080b0bd5867501660793bb
Author: RussTreadon-NOAA <26926959+RussTreadon-NOAA@users.noreply.github.com>
Date: Thu Jan 25 06:17:11 2024 -0500
Simplify and extend load_ufsda_modules to Hercules (#2245)
GDASApp jobs do not run on Hercules because `ush/load_ufsda_modules.sh` does
not include logic to load the appropriate GDASApp modules on Hercules. This PR
extends `load_ufsda_modules.sh` functionality to Hercules, thereby enabling
GDASApp jobs to run on Hercules.
Resolves #2244
commit 56b9680803f109720f6439276a0e5783a9c49352
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Jan 24 19:47:34 2024 +0000
Update hashes (revert WCOSS2 modules).
commit afa09e356503f1befc162df9a79dc9ce7414dc22
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Jan 24 18:59:40 2024 +0000
New (cleaner history) gdas hash.
commit a9eaec23d5103ea766342ff81d77df8e0f6d9a58
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Jan 24 18:52:27 2024 +0000
Update gdasapp to include ss/1.6.0 support.
commit 5ef8eb24eeaeaff9c9a03767d929f2114fd4840f
Merge: 4c463548b e400068a2
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Jan 24 17:08:54 2024 +0000
Merge branch 'ss160' of github.com:DavidHuber-NOAA/global-workflow into ss160
commit 4c463548b0c38f36c13c01716fa0b1e91544e440
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Jan 24 17:05:12 2024 +0000
Reenable verif-global support
commit f775755df5f1579edfafbce9a7b47034907d023f
Author: DavidHuber <david.huber@noaa.gov>
Date: Wed Jan 24 16:59:10 2024 +0000
Assign fcsthrs for awips_g2 job.
commit e400068a2951e5fa3b130369861b4a60ece01491
Author: David Huber <david.huber@noaa.gov>
Date: Mon Jan 22 15:01:07 2024 -0600
More gsi-addon path fixes.
commit f663d4786f226f8164d348d403e8d105cc3d801b
Author: David Huber <david.huber@noaa.gov>
Date: Mon Jan 22 14:41:59 2024 -0600
Fix gsi-addon paths for hercules, orion, and S4.
commit e304bbeb364067e411fb50801796d000b44d9147
Author: DavidHuber <david.huber@noaa.gov>
Date: Mon Jan 22 18:59:34 2024 +0000
Better optimize build jobs (more ufs jobs).
commit ccc6e2d445d4c2e2f44fb907c7bc972b1e69f6ff
Author: DavidHuber <david.huber@noaa.gov>
Date: Mon Jan 22 18:56:18 2024 +0000
Reenable verif-global. #2195
commit 3ef3411f856b0c5a9cf51686f3a51a2252596690
Merge: 4365f63e5 f4d187f4e
Author: DavidHuber <david.huber@noaa.gov>
Date: Mon Jan 22 18:39:10 2024 +0000
Merge remote-tracking branch 'origin/develop' into ss160
commit 4365f63e54e2ddb9b88e768a6e88a92504b5d482
Author: DavidHuber <david.huber@noaa.gov>
Date: Mon Jan 22 18:37:25 2024 +0000
Corrected the SS env. name in the version files. #2195
commit f4d187f4e45fe89583d18987d68a883490827104
Author: AndrewEichmann-NOAA <58948505+AndrewEichmann-NOAA@users.noreply.github.com>
Date: Mon Jan 22 12:28:28 2024 -0500
Converts obsproc to obsprep in prepoceanobs config file (#2236)
Converts obsproc to obsprep in prepoceanobs config file as a compliment to mutually depended GDASApp PR NOAA-EMC/GDASApp#858
The motivations are explained in refs NOAA-EMC/GDASApp#857
commit 9a09d3082208ad206cf6e7103a53bfb7c4946f4a
Author: DavidHuber <david.huber@noaa.gov>
Date: Fri Jan 19 21:23:50 2024 +0000
Corrected gsi-addon-dev spelling.
commit 21ff6458aac9372b26cc223f6a114953a137067e
Author: DavidHuber <david.huber@noaa.gov>
Date: Fri Jan 19 21:11:34 2024 +0000
Update modulefiles, submodules to spack-stack 1.6.0. #2195
commit d4c55d1011f8b0385d25b62ac04710837ed8413e
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Jan 19 15:43:37 2024 -0500
Update typing hint for WCOSS version of python (#2238)
The typing hint `typing.List` was deprecated with python 3.9 in favor
of using the primitive `list[str]`, but the functional version of python
on WCOSS2 is <3.9, causing `setup_xml.py` to fail there. This replaces
`list[str]` as a typing hint with the deprecated form until the supported
version on WCOSS2 is >=3.9.
commit 491928712ae1dabac62750450c9cad8f538c2a3e
Author: Barry Baker <bbakernoaa@users.noreply.github.com>
Date: Thu Jan 18 22:31:27 2024 -0500
GOCART Emission updates for GEFSv13 and GDAS (#2201)
This PR addresses several things needed for more recent simulations using
GOCART2G as well as preparing for the GEFSv13 30 year run. The main
updates are:
- Update CEDS to use monthly emission files instead of daily. This will
drastically reduce the number of files needed. No science change
- Update biogenic MEGAN inputs to use a climatology rather than the
offline biogenic previously used. This is needed to deal with simulations
where the current dataset is not available.
- Update volcanic SO4 emissions to use degassing emissions only. This is
to support the need for more recent simulations where data is not available.
commit 13d25cfc3614de978bfd4b7f273d1f13cb820878
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Jan 18 22:29:43 2024 -0500
Add `POSTAMBLE_CMD` into preamble postamble (#2235)
This PR adds the ability to run a command at the end of jobs via the
preamble's postamble function. A new command can be set via
`POSTAMBLE_CMD` and will be invoked at the end of jobs. Users can
add the command to the top of an env file to have every job run it or
it can be placed within a job if-block in the env file to run for just that
job.
Resolves #1145
commit 7759163c668eb6ccc11dc1ecd39c0dc5d433cdc1
Author: Rahul Mahajan <aerorahul@users.noreply.github.com>
Date: Thu Jan 18 01:13:49 2024 -0500
Add option to…
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This adds two additional wave jobs for point processing at the end of the job and then for boundary point jobs removing the points from the side-by-side jobs. The boundary point job supplies new output needed for downstream jobs and requires a change in fix files. There will be another change for optimizing these jobs as a follow up to this.
This also adds the cdo module used in wave prep and small changes related to using this module in ush/wave_prnc_cur.sh
There will be no fix-file changes related to this.
There are a few clean up/ changes for better error handling.
Changes were made for several of the resources for wave jobs. There should be no impact in performance.
Testing the forecast only reproduces the real-time parallel for atm and has the expected changes for waves.