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File "/home/jeroen/NOBINFBACKUP/outbreak/programs/phap/workflow/rules/../scripts/get_lca.py", line 151, in
ncbi = NCBITaxa(dbfile=args.db)
File "/home/jeroen/NOBINFBACKUP/outbreak/programs/phap/.snakemake/conda/938b87b5c0c2950d3032494a9e1aa10d/lib/python3.8/site-packages/ete3/ncbi_taxonomy/ncbiquery.py", line 115, in init
raise ValueError("Cannot open taxonomy database: %s" % self.dbfile)
ValueError: Cannot open taxonomy database: /home/jeroen/.etetoolkit/taxa.sqlite`
The text was updated successfully, but these errors were encountered:
`$ cat logs/outbreak/get_lca.log
Traceback (most recent call last):
File "/home/jeroen/NOBINFBACKUP/outbreak/programs/phap/workflow/rules/../scripts/get_lca.py", line 151, in
ncbi = NCBITaxa(dbfile=args.db)
File "/home/jeroen/NOBINFBACKUP/outbreak/programs/phap/.snakemake/conda/938b87b5c0c2950d3032494a9e1aa10d/lib/python3.8/site-packages/ete3/ncbi_taxonomy/ncbiquery.py", line 115, in init
raise ValueError("Cannot open taxonomy database: %s" % self.dbfile)
ValueError: Cannot open taxonomy database: /home/jeroen/.etetoolkit/taxa.sqlite`
The text was updated successfully, but these errors were encountered: