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Merge PRs in issue #642 to hdf5_1_12#643

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lrknox merged 60 commits intoHDFGroup:hdf5_1_12HDFGroup/hdf5:hdf5_1_12from lrknox:hdf5_1_12Copy head branch name to clipboardMay 15, 2021

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Commits on Nov 23, 2020

• Snapshot version 1.12 release 1-3. Update version to 1.12.1-4.

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Commits on Nov 26, 2020

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• First cut of the H5 public API documentation. (#80)

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• Full set of current H5F documentation. (#105)

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• Doxygen - added (mostly) beginner functions (#112)

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• Add src/H5module.h to MANIFEST.

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Commits on Dec 11, 2020

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on Dec 14, 2020

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on Dec 17, 2020

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• close #195. (#196)

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Commits on Dec 26, 2020

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Avoid aligned access for references by decoding into temporary buffer and then copying the result into the actual buffer. Update test to be more thorough with using compound datatype fields everywh…

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Commits on Jan 6, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Modify temporary rpath for testing in java example scripts. (#230)

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Commits on Jan 9, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on Feb 23, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Fix undefined left shifting of negative numbers (#338)

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  seanm

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Commits on Mar 10, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Fixes various warnings noticed on Windows (#425)

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• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Applied clang-tidy readability-non-const-parameter warning fixes auto… (#429)

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• Added C++11 override keyword where appropriate (#433)

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• Various clang tidy warning fixes (#448)

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• Removed checks/workarounds for pre-C++89 compatibility (#449)

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• Fixed all clang-tidy bugprone-suspicious-string-compare warnings (#451)

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Commits on Mar 11, 2021

• Remove 2 functions incorrectly merged from develop in a cherry-pick merge of PR #451.

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Commits on Mar 21, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on Apr 1, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on Apr 2, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on Apr 5, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on May 3, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Minor parallel improvements (#519)

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• Clean up MPI-IO VFD tracing support (#520)

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• Brings the native implementation of H5Fdelete() from Bitbucket (#524)

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Commits on May 4, 2021

• Minor warning fixes in develop (#526)

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• Removes implementation of my_strdup() from the multi VFD (#527)

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• Removes dead H5ST package from the library (#528)

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• Fix HDFFV-11232 (#530)

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• Fixes incorrect usage of H5I_BADID (#554)

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• Fixes a segfault when H5Pset_mdc_log_options is called multiple times on a fapl (#601)

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• Fix for a segfault when H5Pset_fapl_log is passed an invalid fapl ID (#607)

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• Fixes crashes when size_hint > UINT32_MAX is passed to H5Gcreate1 (#611)

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• Revert "Brings the native implementation of H5Fdelete() from Bitbucket (#524)"

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Commits on May 6, 2021

• Removed mentions of Wdeclaration-after-statement now that C99 is requ… (#447)

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• Made private my_yyinput function static (#618)

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• Adds const to a few global variables (#623)

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• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• (fix) Segmentation fault when using a compound type. (#143)

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• (fix) H5Z_xform_create function and scientific notation (#144)

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• Committing clang-format changes

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Commits on May 10, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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Commits on May 15, 2021

• Merge branch 'hdf5_1_12' of https://github.com/HDFGroup/hdf5 into hdf5_1_12

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• Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)

  

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• Cleanup tools debug build warnings (#627)

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• h5diff subset indexing (#628)

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• Removes gratuitous (double)x.yF casts (#632)

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• Cleans up a const warning left over from previous constification (#633)

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• Purges UFAIL from the library (#637)

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• Bmr dev hdffv 11223 (#640)

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• Revert "Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)"

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