Vector instantiation with geopandas dataset fails #391
Comments
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@adehecq You need to update The reason it didn't trigger before is because the related line (https://github.com/GlacioHack/geoutils/blob/main/geoutils/vector.py#L86) is not executed during package import, only when the function is used. So it's your environment update in July that broke it. Otherwise, we could add backwards-compatibility with a different type syntax. Or force shapely > 2.0 in the environment file (but this hasn't been in issue given what we force in geopandas already). |
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Yes, that's what I thought about the version of shapely. But I couldn't easily find the equivalence between the two versions. |
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Actually, the issue occurs in other places for |
Mmmhh... That might be due to geopandas versioning. Current tests go through a "manual" list with almost all geopandas functions but don't adapt completely to the current environment version, so old geopandas versions might trigger errors. |
When I try to start a Vector instance with a geopandas' dataset, it fails with the error:
"AttributeError: module 'shapely' has no attribute 'Geometry'"
Not sure what's going on...
To Reproduce
In my local environment, the test suite of Vector fails:
pytest tests/test_vector.pySystem (please complete the following information):
I'm working with shapely=1.8.5.
Full conda env below.
# Name Version Build Channel
affine 2.4.0 pyhd8ed1ab_0 conda-forge
alabaster 0.7.12 pypi_0 pypi
anyio 3.7.1 pyhd8ed1ab_0 conda-forge
aom 3.5.0 hf0c8a7f_0 conda-forge
appnope 0.1.3 pyhd8ed1ab_0 conda-forge
argon2-cffi 21.3.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py39ha30fb19_3 conda-forge
arrow 1.2.3 pyhd8ed1ab_0 conda-forge
arrow-cpp 10.0.1 h57ddcff_4_cpu conda-forge
asciitree 0.3.3 py_2 conda-forge
astroid 2.7.2 pypi_0 pypi
asttokens 2.2.1 pyhd8ed1ab_0 conda-forge
async-lru 2.0.4 pyhd8ed1ab_0 conda-forge
attrs 23.1.0 pyh71513ae_1 conda-forge
aws-c-auth 0.6.21 h79862ba_1 conda-forge
aws-c-cal 0.5.20 h2f96456_3 conda-forge
aws-c-common 0.8.5 hb7f2c08_0 conda-forge
aws-c-compression 0.2.16 hfb1f584_0 conda-forge
aws-c-event-stream 0.2.16 hb9fe1ad_0 conda-forge
aws-c-http 0.6.29 h40fbe91_0 conda-forge
aws-c-io 0.13.11 hb3bb6ef_2 conda-forge
aws-c-mqtt 0.7.13 h9baa75a_10 conda-forge
aws-c-s3 0.2.1 hfb6aee5_2 conda-forge
aws-c-sdkutils 0.1.7 hfb1f584_0 conda-forge
aws-checksums 0.1.14 hfb1f584_0 conda-forge
aws-crt-cpp 0.18.16 hb25e9ed_5 conda-forge
aws-sdk-cpp 1.9.379 h6febe8c_6 conda-forge
babel 2.9.1 pypi_0 pypi
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 pyhd8ed1ab_3 conda-forge
backports-entry-points-selectable 1.1.0 pypi_0 pypi
backports.functools_lru_cache 1.6.5 pyhd8ed1ab_0 conda-forge
beautifulsoup4 4.12.2 pyha770c72_0 conda-forge
black 23.7.0 py39h6e9494a_1 conda-forge
bleach 6.0.0 pyhd8ed1ab_0 conda-forge
blosc 1.21.4 heccf04b_0 conda-forge
bokeh 3.2.1 pyhd8ed1ab_0 conda-forge
boost-cpp 1.78.0 h31500c2_2 conda-forge
branca 0.6.0 pyhd8ed1ab_0 conda-forge
brotli 1.0.9 hb7f2c08_9 conda-forge
brotli-bin 1.0.9 hb7f2c08_9 conda-forge
brotli-python 1.0.9 py39h7a8716b_9 conda-forge
brotlipy 0.7.0 py39ha30fb19_1005 conda-forge
brunsli 0.1 h046ec9c_0 conda-forge
bzip2 1.0.8 h0d85af4_4 conda-forge
c-ares 1.19.1 h0dc2134_0 conda-forge
c-blosc2 2.10.0 h0dcb076_0 conda-forge
ca-certificates 2023.7.22 h8857fd0_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cairo 1.16.0 h904041c_1014 conda-forge
cartopy 0.21.0 py39hbc3d154_2 conda-forge
certifi 2023.7.22 pyhd8ed1ab_0 conda-forge
cffi 1.15.1 py39h131948b_3 conda-forge
cfgv 3.3.1 pypi_0 pypi
cfitsio 4.1.0 h2c97ad1_0 conda-forge
cftime 1.6.2 py39h7cc1f47_1 conda-forge
charls 2.3.4 he49afe7_0 conda-forge
charset-normalizer 3.2.0 pyhd8ed1ab_0 conda-forge
click 8.1.6 unix_pyh707e725_0 conda-forge
click-plugins 1.1.1 py_0 conda-forge
cligj 0.7.2 pyhd8ed1ab_1 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
comm 0.1.4 pyhd8ed1ab_0 conda-forge
contourpy 1.1.0 py39h8ee36c8_0 conda-forge
cryptography 39.0.0 py39h7eb6a14_0 conda-forge
curl 7.86.0 h57eb407_1 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
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dask 2023.8.0 pyhd8ed1ab_0 conda-forge
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dbus 1.13.6 h811a1a6_3 conda-forge
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decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
deprecated 1.2.13 pypi_0 pypi
distlib 0.3.2 pypi_0 pypi
distributed 2023.8.0 pyhd8ed1ab_0 conda-forge
docutils 0.16 pypi_0 pypi
double-conversion 3.2.0 hf0c8a7f_1 conda-forge
eigen 3.4.0 h940c156_0 conda-forge
emcee 3.1.4 pyhd8ed1ab_0 conda-forge
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.1.2 pyhd8ed1ab_0 conda-forge
executing 1.2.0 pyhd8ed1ab_0 conda-forge
expat 2.5.0 hf0c8a7f_1 conda-forge
fasteners 0.17.3 pyhd8ed1ab_0 conda-forge
ffmpeg 4.4.2 gpl_h8b4fe81_112 conda-forge
filelock 3.0.12 pypi_0 pypi
fiona 1.8.22 py39h6fa385f_0 conda-forge
flake8 3.9.2 pypi_0 pypi
flit-core 3.9.0 pyhd8ed1ab_0 conda-forge
folium 0.14.0 pyhd8ed1ab_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
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fontconfig 2.14.2 h5bb23bf_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.42.0 py39hdc70f33_0 conda-forge
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fsspec 2023.6.0 pyh1a96a4e_0 conda-forge
gdal 3.5.2 py39h6aafa27_4 conda-forge
gdown 4.7.1 pyhd8ed1ab_0 conda-forge
geopandas 0.13.2 pyhd8ed1ab_1 conda-forge
geopandas-base 0.13.2 pyha770c72_1 conda-forge
geos 3.11.0 hb486fe8_0 conda-forge
geotiff 1.7.1 ha1a2aeb_3 conda-forge
geoutils 0.0.9 pypi_0 pypi
gettext 0.21.1 h8a4c099_0 conda-forge
gflags 2.2.2 hb1e8313_1004 conda-forge
giflib 5.2.1 hb7f2c08_3 conda-forge
git-lfs 3.4.0 h694c41f_0 conda-forge
gl2ps 1.4.2 h4cff582_0 conda-forge
glew 2.1.0 h046ec9c_2 conda-forge
glib 2.76.4 h7d26f99_0 conda-forge
glib-tools 2.76.4 h7d26f99_0 conda-forge
glog 0.6.0 h8ac2a54_0 conda-forge
gmp 6.2.1 h2e338ed_0 conda-forge
gnutls 3.7.8 h207c4f0_0 conda-forge
graphite2 1.3.13 h2e338ed_1001 conda-forge
grpcio 1.42.0 pypi_0 pypi
gst-plugins-base 1.20.3 h37e1711_2 conda-forge
gstools 1.5.0 py39h4a91e55_0 conda-forge
gstreamer 1.20.3 h1d18e73_2 conda-forge
h5py 3.8.0 nompi_py39h7d40783_100 conda-forge
hankel 1.2.2 pyhd8ed1ab_0 conda-forge
harfbuzz 6.0.0 h08f8713_0 conda-forge
hdf4 4.2.15 h7aa5921_5 conda-forge
hdf5 1.12.2 nompi_hc782337_100 conda-forge
heapdict 1.0.1 py_0 conda-forge
icu 70.1 h96cf925_0 conda-forge
identify 2.2.13 pypi_0 pypi
idna 3.4 pyhd8ed1ab_0 conda-forge
imagecodecs 2022.9.26 py39h1e0cc1c_3 conda-forge
imageio 2.31.1 pyh24c5eb1_0 conda-forge
imagesize 1.2.0 pypi_0 pypi
importlib-metadata 6.8.0 pyha770c72_0 conda-forge
importlib-resources 6.0.1 pyhd8ed1ab_0 conda-forge
importlib_metadata 6.8.0 hd8ed1ab_0 conda-forge
importlib_resources 6.0.1 pyhd8ed1ab_0 conda-forge
iniconfig 1.1.1 pypi_0 pypi
ipdb 0.13.13 pyhd8ed1ab_0 conda-forge
ipykernel 6.25.1 pyh5fb750a_0 conda-forge
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ipython 8.14.0 pyhd1c38e8_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
ipywidgets 8.1.0 pyhd8ed1ab_0 conda-forge
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isort 5.9.3 pypi_0 pypi
jasper 2.0.33 h7c6fec8_1 conda-forge
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jedi 0.19.0 pyhd8ed1ab_0 conda-forge
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jpeg 9e hb7f2c08_3 conda-forge
json-c 0.16 h01d06f9_0 conda-forge
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jsonschema 4.2.1 pypi_0 pypi
jsonschema-specifications 2023.7.1 pyhd8ed1ab_0 conda-forge
jsonschema-with-format-nongpl 4.19.0 pyhd8ed1ab_0 conda-forge
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jupyter_core 5.3.1 py39h6e9494a_0 conda-forge
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jupyterlab 4.0.4 pyhd8ed1ab_0 conda-forge
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jupyterlab_widgets 3.0.8 pyhd8ed1ab_0 conda-forge
jupytext 1.15.0 pyhcff175f_0 conda-forge
jxrlib 1.1 h35c211d_2 conda-forge
kealib 1.4.15 h51f5cc1_1 conda-forge
kh9-glacier-global 0.0.1 dev_0
kiwisolver 1.4.4 py39h92daf61_1 conda-forge
krb5 1.19.3 hb49756b_0 conda-forge
lame 3.100 hb7f2c08_1003 conda-forge
lazy-object-proxy 1.6.0 pypi_0 pypi
lazy_loader 0.2 pyhd8ed1ab_0 conda-forge
lcms2 2.14 h90f4b2a_0 conda-forge
lerc 4.0.0 hb486fe8_0 conda-forge
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libaec 1.0.6 hf0c8a7f_1 conda-forge
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pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
py 1.10.0 pypi_0 pypi
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pyarrow 10.0.1 py39h31d4e7f_4_cpu conda-forge
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