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DESCRIPTION
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Package: EpiModelHPC
Version: 2.5.0
Date: 2024-10-18
Title: EpiModel Extensions for High-Performance Computing
Description: Extension package to EpiModel to run large-scale stochastic network
models on modern high-performance computing systems. Functionality provided to
simulate models in parallel using single-node, multiple-core setups. Check-pointing
functions that automatically save and restore simulation work, which may be
useful on HPC systems with Portable Batch System (PBS) job scheduling software
like OpenPBS, are also included.
Maintainer: Samuel Jenness <samuel.m.jenness@emory.edu>
Authors@R: c(person("Samuel", "Jenness",
role=c("cre","aut"), email="samuel.m.jenness@emory.edu"))
License: GPL-3
URL: http://epimodel.org/, http://epimodel.github.io/EpiModelHPC/
BugReports: https://github.com/EpiModel/EpiModelHPC/issues
Depends:
R (>= 4.1),
EpiModel (>= 2.5.0)
Imports:
dplyr,
tidyr,
doParallel,
foreach,
ergm,
fs,
future,
future.apply,
rlang,
tidyselect,
tergm,
stringr,
slurmworkflow,
swfcalib,
callr
Suggests:
rmarkdown,
testthat,
network,
knitr
Remotes:
github::EpiModel/slurmworkflow,
github::EpiModel/swfcalib
VignetteBuilder: knitr
RoxygenNote: 7.3.2
Encoding: UTF-8
Roxygen: list(markdown = TRUE)