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Omega doc correction - quick start mesh sym links #157

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The Omega quick start guide had a minor mistake in the command for the meshes symlinks.
Correct syntax is:
ln -sf ../global_test_mesh.nc test/OmegaSphereMesh.nc
or

cd test
ln -sf  ../global_test_mesh.nc OmegaSphereMesh.nc

I proposed the latter because of its readability.

Peter Bogenschutz and others added 30 commits September 25, 2024 13:31
This is an attempt to assure atm.log (EAM) and homme_atm.log (EAMxx) get full
output when the dycore calls MPI_Abort.
Besides not adding much, when used in cime-nml-tests, as part
of finding matches to atmchange, it messes up future searches
Before we had two styles, 'short', and 'full'. The former only
printed the leaf name, the latter printed the full scope.

I changed those to 'node-name' and 'full-scope', and added a new
style called 'parent-scope', which only adds one parent to the
scope of the name. These types are used by default for:

- node-name: when printing recursively
- full-scope: when using --grep (unless the grep matches a non-leaf
  node, in which case the nested values are printed with node-name format)
- parent-scope: the default when printing a parameter
…-Project#6643)

Correct ocean conservation check settings

Currently, the ocean conservation check analysis member overwrites the
first entry in the file with a zero after restarts for some variables.
This PR corrects this behavior so that the first day's entry in a
monthly conservation check file is identical between continuous runs and
a run with a restart break. Adds a new mpaso testdef and corresponding
stealth test.

Fixes E3SM-Project#6642

[NML] for some mpaso resolutions
[BFB]
…/eamxx/atmmanip-any

Automatically Merged using E3SM Pull Request AutoTester
PR Title: Change handling of multiple matches in atmchange/atmquery
PR Author: bartgol
PR LABELS: enhancement, AT: AUTOMERGE, scripts
mwarusz and others added 29 commits October 31, 2024 19:43
  Model clock and time information is best handled in the
  time stepper. This allows the clock, and various alarms to
  be carried between init and run methods and is needed to better
  support other capabilities like streams that use alarms. The commit:
  - adds a clock, timestep, end alarm and time info to the TimeStepper class
  - splits the TimeStepper construction to better support the split
    initialization of the default time stepper
  - moves the clock advance into the doStep method
  - updates documentation
  - modifies some formatting
…recision

Enable building and testing Omega in single precision
Add clock and time info to Omega TimeStepper
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