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add carbon to conservation check analysis member #5151

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merged 8 commits into from
Sep 22, 2022
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Merged

add carbon to conservation check analysis member #5151

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e77a0d9
add carbon to conservation check analysis member
maltrud Aug 23, 2022
3f3328e
add author info to carbon_conservation routine
maltrud Aug 23, 2022
67f57a8
modified some variable names for consistency
maltrud Sep 12, 2022
15e3359
add ice PhytoC to organic flux diagnostic computation
maltrud Sep 12, 2022
0510edf
fix relative error exit condition
maltrud Sep 12, 2022
9b974ad
correct units for C flux written to log file
maltrud Sep 13, 2022
2b7fe73
change output log flux units to agree with cpl log
maltrud Sep 15, 2022
55764b7
add per-timestep relative C error to output log
maltrud Sep 15, 2022
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8 changes: 8 additions & 0 deletions components/mpas-ocean/cime_config/buildnml
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Original file line number Diff line number Diff line change
Expand Up @@ -999,6 +999,14 @@ def buildnml(case, caseroot, compname):
lines.append('<var name="accumulatedLandIceFlux"/>')
lines.append('<var name="accumulatedLandIceFrazilFlux"/>')
lines.append('<var name="accumulatedSeaIceSalinityFlux"/>')
lines.append('<var name="initialCarbon"/>')
lines.append('<var name="finalCarbon"/>')
lines.append('<var name="carbonChange"/>')
lines.append('<var name="netCarbonFlux"/>')
lines.append('<var name="absoluteCarbonError"/>')
lines.append('<var name="relativeCarbonError"/>')
lines.append('<var name="accumulatedAbsoluteCarbonError"/>')
lines.append('<var name="accumulatedRelativeCarbonError"/>')
lines.append('</stream>')
lines.append('')
lines.append('<immutable_stream name="conservationCheckRestart"')
Expand Down
58 changes: 58 additions & 0 deletions components/mpas-ocean/src/analysis_members/Registry_conservation_check.xml
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Expand Up @@ -198,6 +198,53 @@
description="Salinity flux from frazil to Land Ice, given to coupler. Positive into the ocean."
/>
</var_struct>
<var_struct name="conservationCheckCarbonAM" time_levs="1" packages="conservationCheckAMPKG">
<var name="initialCarbon" type="real" dimensions="Time" units="kg"
description="Total ocean carbon at start of conservation interval"
/>
<var name="finalCarbon" type="real" dimensions="Time" units="kg"
description="Total ocean carbon at end of conservation interval"
/>
<var name="carbonChange" type="real" dimensions="Time" units="kg"
description="Change in ocean carbon over conservation interval"
/>
<var name="netCarbonFlux" type="real" dimensions="Time" units="kg"
description="Net surface flux of ocean carbon over conservation interval"
/>
<var name="absoluteCarbonError" type="real" dimensions="Time" units="kg"
description="Absolute carbon conservation error over conservation interval"
/>
<var name="relativeCarbonError" type="real" dimensions="Time" units="1"
description="Relative carbon conservation error over conservation interval"
/>
<var name="accumulatedAbsoluteCarbonError" type="real" default_value="0.0" dimensions="Time" units="kg"
description="Accumulated absolute carbon conservation error over entire simulation"
/>
<var name="accumulatedRelativeCarbonError" type="real" default_value="0.0" dimensions="Time" units="1"
description="Accumulated relative carbon conservation error over entire simulation"
/>
<var name="accumulatedCarbonSourceSink" type="real" dimensions="Time" units="kg"
description="Volume integral of all carbon source-sink terms from MarBL"
/>
<var name="accumulatedCarbonSedimentFlux" type="real" dimensions="Time" units="kg"
description="Surface integral of all carbon sediment fluxes"
/>
<var name="accumulatedCarbonSurfaceFlux" type="real" dimensions="Time" units="kg"
description="Surface integral of all carbon ocean surface fluxes"
/>
<var name="accumulatedCarbonTend" type="real" dimensions="Time" units="kg"
description="Volume integral of all carbon-containing prognostic variable tendencies"
/>
<var name="accumulatedCO2gasFlux" type="real" dimensions="Time" units="kg"
description="Surface integral of air-sea CO2 gas flux"
/>
<var name="accumulatedIceOceanOrganicCarbonFlux" type="real" dimensions="Time" units="kg"
description="Surface integral of all organic ice-ocean carbon fluxes"
/>
<var name="accumulatedIceOceanInorganicCarbonFlux" type="real" dimensions="Time" units="kg"
description="Surface integral of all inorganic ice-ocean carbon fluxes"
/>
</var_struct>
<streams>
<stream name="conservationCheckOutput" type="output"
mode="forward;analysis"
Expand Down Expand Up @@ -259,6 +306,14 @@
<var name="accumulatedSeaIceSalinityFlux"/>
<var name="accumulatedFrazilSalinityFlux"/>
<var name="accumulatedLandIceFrazilSalinityFlux"/>
<var name="initialCarbon"/>
<var name="finalCarbon"/>
<var name="carbonChange"/>
<var name="netCarbonFlux"/>
<var name="absoluteCarbonError"/>
<var name="relativeCarbonError"/>
<var name="accumulatedAbsoluteCarbonError"/>
<var name="accumulatedRelativeCarbonError"/>
</stream>

<stream name="conservationCheckRestart"
Expand Down Expand Up @@ -308,5 +363,8 @@
<var name="accumulatedSeaIceSalinityFlux"/>
<var name="accumulatedFrazilSalinityFlux"/>
<var name="accumulatedLandIceFrazilSalinityFlux"/>
<var name="initialCarbon"/>
<var name="accumulatedAbsoluteCarbonError"/>
<var name="accumulatedRelativeCarbonError"/>
</stream>
</streams>
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