build directory: .build
cmake command: cmake  -DCMAKE_INSTALL_PREFIX=.. -DPIC_EXTENSION_PATH=..   -DALPAKA_ACC_GPU_CUDA_ENABLE=ON -DALPAKA_ACC_GPU_CUDA_ONLY_MODE=ON -DALPAKA_CUDA_ARCH="70" /home/labs/malkalab/danle/src/picongpu/include/picongpu
-- The C compiler identification is GNU 6.3.0
-- The CXX compiler identification is GNU 6.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /apps/RH7U2/gnu/gcc/6.3.0/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /apps/RH7U2/gnu/gcc/6.3.0/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Found Boost: /apps/RH7U2/gnu/boost/1.69.0/include (found suitable version "1.69.0", minimum required is "1.65.1") found components: fiber context 
-- Found CUDA: /apps/RH7U2/general/cuda/9.2 (found suitable version "9.2", minimum required is "9.0") 
-- ALPAKA_ACC_GPU_CUDA_ONLY_MODE
-- ALPAKA_ACC_GPU_CUDA_ENABLED
-- _cupla_COMPILE_OPTIONS_PUBLIC: -Wall;-Wextra;-Wno-unknown-pragmas;-Wno-unused-parameter;-Wno-unused-local-typedefs;-Wno-attributes;-Wno-reorder;-Wno-sign-compare
-- _cupla_COMPILE_DEFINITIONS_PUBLIC: CUPLA_STREAM_ASYNC_ENABLED=1
-- _cupla_INCLUDE_DIRECTORIES_PUBLIC: /home/labs/malkalab/danle/src/picongpu/thirdParty/cupla/include
-- _cupla_LINK_LIBRARIES_PUBLIC: 
-- Found cupla: /home/labs/malkalab/danle/src/picongpu/thirdParty/cupla/include (found version "0.3.0") 
-- Found MPI_C: /apps/RH7U2/gnu/openmpi/2.0.1/lib/libmpi.so (found version "3.1") 
-- Found MPI_CXX: /apps/RH7U2/gnu/openmpi/2.0.1/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Boost: /apps/RH7U2/gnu/boost/1.69.0/include (found suitable version "1.69.0", minimum required is "1.65.1") found components: filesystem system math_tr1 
-- Boost: result_of with TR1 style and decltype fallback
-- Boost: deactivate std::auto_ptr
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Found Boost: /apps/RH7U2/gnu/boost/1.69.0/include (found suitable version "1.69.0", minimum required is "1.65.1")  
-- Using mallocMC from thirdParty/ directory
-- Could NOT find alpaka (missing: alpaka_DIR)
-- Found mallocMC: /home/labs/malkalab/danle/src/picongpu/thirdParty/mallocMC/src (found suitable version "2.6.0", minimum required is "2.5.0")  
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.7") 
-- Found Boost: /apps/RH7U2/gnu/boost/1.69.0/include (found suitable version "1.69.0", minimum required is "1.65.1") found components: program_options filesystem system math_tr1 serialization 
-- Found CUDA: /apps/RH7U2/general/cuda/9.2 (found version "9.2") 
-- Could NOT find NVML (missing: NVML_LIBRARY NVML_INCLUDE_DIR) 
-- Found Boost: /apps/RH7U2/gnu/boost/1.69.0/include (found suitable version "1.69.0", minimum required is "1.65.1") found components: program_options 
-- Found HDF5: /home/labs/malkalab/danle/lib/hdf5/lib/libhdf5.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.8.20")  
-- Found 'adios_config': /home/labs/malkalab/danle/lib/adios/bin/adios_config
-- ADIOS linker flags (unparsed): -L/home/labs/malkalab/danle/lib//adios/lib -ladios -L/home/labs/malkalab/danle/lib//zlib/lib64 -L/home/labs/malkalab/danle/lib//c-blosc/lib -lz -lblosc -lpthread -lm
-- ADIOS compiler flags (unparsed): -I/home/labs/malkalab/danle/lib//adios/include -DZLIB -I/home/labs/malkalab/danle/lib//zlib/include -DBLOSC -I/home/labs/malkalab/danle/lib//c-blosc/include -I/home/labs/malkalab/danle/lib//c-blosc/include
-- ADIOS DIRS to look for libs: /home/labs/malkalab/danle/lib//adios/lib;/home/labs/malkalab/danle/lib//zlib/lib64;/home/labs/malkalab/danle/lib//c-blosc/lib
-- Found adios in /home/labs/malkalab/danle/lib/adios/lib/libadios.a
-- Found z in /usr/lib64/libz.so
-- Found blosc in /home/labs/malkalab/danle/lib/c-blosc/lib/libblosc.so
-- Found pthread in /usr/lib64/libpthread.so
-- Found m in /usr/lib64/libm.so
-- ADIOS compile definitions: -DZLIB -DBLOSC
-- Found ADIOS: /home/labs/malkalab/danle/lib/adios/lib/libadios.a;/usr/lib64/libz.so;/home/labs/malkalab/danle/lib/c-blosc/lib/libblosc.so;/usr/lib64/libpthread.so;/usr/lib64/libm.so (found version "1.13.1") 
-- Found openPMD: /home/labs/malkalab/danle/lib/openPMD-api/lib64/cmake/openPMD
-- Found 'adios_config': /home/labs/malkalab/danle/lib/adios/bin/adios_config
-- ADIOS linker flags (unparsed): -L/home/labs/malkalab/danle/lib//adios/lib -ladios -L/home/labs/malkalab/danle/lib//zlib/lib64 -L/home/labs/malkalab/danle/lib//c-blosc/lib -lz -lblosc -lpthread -lm
-- ADIOS compiler flags (unparsed): -I/home/labs/malkalab/danle/lib//adios/include -DZLIB -I/home/labs/malkalab/danle/lib//zlib/include -DBLOSC -I/home/labs/malkalab/danle/lib//c-blosc/include -I/home/labs/malkalab/danle/lib//c-blosc/include
-- ADIOS DIRS to look for libs: /home/labs/malkalab/danle/lib//adios/lib;/home/labs/malkalab/danle/lib//zlib/lib64;/home/labs/malkalab/danle/lib//c-blosc/lib
-- Found adios in /home/labs/malkalab/danle/lib/adios/lib/libadios.a
-- Found z in /usr/lib64/libz.so
-- Found blosc in /home/labs/malkalab/danle/lib/c-blosc/lib/libblosc.so
-- Found pthread in /usr/lib64/libpthread.so
-- Found m in /usr/lib64/libm.so
-- ADIOS compile definitions: -DZLIB -DBLOSC
-- Found ADIOS: /home/labs/malkalab/danle/lib/adios/lib/libadios.a;/usr/lib64/libz.so;/home/labs/malkalab/danle/lib/c-blosc/lib/libblosc.so;/usr/lib64/libpthread.so;/usr/lib64/libm.so (found suitable version "1.13.1", minimum required is "1.13.1") 
-- Found Splash: /home/labs/malkalab/danle/lib/splash/lib/cmake/Splash
-- Could NOT find PNGwriter (missing: PNGwriter_DIR)
-- Could NOT find PNGwriter - set PNGwriter_DIR or check your CMAKE_PREFIX_PATH
-- Could NOT find ISAAC - set ISAAC_DIR or check your CMAKE_PREFIX_PATH
-- Configuring done
-- Generating done
-- Build files have been written to: /home/labs/malkalab/danle/picInput/FoilLCT/.build
[  4%] Building NVCC (Device) object CMakeFiles/cupla.dir/__/__/thirdParty/cupla/src/cupla_generated_stream.cpp.o
[  8%] Building NVCC (Device) object CMakeFiles/cupla.dir/__/__/thirdParty/cupla/src/cupla_generated_common.cpp.o
[ 12%] Building NVCC (Device) object CMakeFiles/cupla.dir/__/__/thirdParty/cupla/src/manager/cupla_generated_Driver.cpp.o
[ 16%] Building NVCC (Device) object CMakeFiles/cupla.dir/__/__/thirdParty/cupla/src/cupla_generated_event.cpp.o
[ 24%] Building NVCC (Device) object build_cuda_memtest/CMakeFiles/cuda_memtest.dir/cuda_memtest_generated_tests.cu.o
[ 28%] Building NVCC (Device) object CMakeFiles/cupla.dir/__/__/thirdParty/cupla/src/cupla_generated_device.cpp.o
[ 28%] Building NVCC (Device) object build_cuda_memtest/CMakeFiles/cuda_memtest.dir/cuda_memtest_generated_cuda_memtest.cu.o
[ 32%] Building NVCC (Device) object CMakeFiles/cupla.dir/__/__/thirdParty/cupla/src/cupla_generated_memory.cpp.o
Scanning dependencies of target mpiInfo
[ 36%] Building CXX object build_mpiInfo/CMakeFiles/mpiInfo.dir/mpiInfo.cpp.o
Scanning dependencies of target picongpu-hostonly
[ 40%] Building CXX object CMakeFiles/picongpu-hostonly.dir/plugins/ResourceLog.cpp.o
[ 44%] Building CXX object CMakeFiles/picongpu-hostonly.dir/plugins/misc/ComponentNames.cpp.o
[ 48%] Building CXX object CMakeFiles/picongpu-hostonly.dir/initialization/ParserGridDistribution.cpp.o
[ 52%] Building CXX object CMakeFiles/picongpu-hostonly.dir/random/seed/Seed.cpp.o
[ 56%] Building CXX object CMakeFiles/picongpu-hostonly.dir/ArgsParser.cpp.o
[ 60%] Building CXX object CMakeFiles/picongpu-hostonly.dir/plugins/misc/removeSpaces.cpp.o
[ 64%] Building CXX object CMakeFiles/picongpu-hostonly.dir/plugins/misc/splitString.cpp.o
[ 68%] Building CXX object CMakeFiles/picongpu-hostonly.dir/plugins/common/stringHelpers.cpp.o
Scanning dependencies of target cuda_memtest
[ 72%] Building CXX object build_cuda_memtest/CMakeFiles/cuda_memtest.dir/misc.cpp.o
[ 76%] Linking CXX executable cuda_memtest
[ 76%] Built target cuda_memtest
[ 80%] Linking CXX executable mpiInfo
[ 80%] Built target mpiInfo
[ 84%] Linking CXX static library libpicongpu-hostonly.a
[ 84%] Built target picongpu-hostonly
Scanning dependencies of target cupla
[ 88%] Linking CXX static library libcupla.a
[ 88%] Built target cupla
[ 96%] Building NVCC (Device) object CMakeFiles/picongpu.dir/picongpu_generated_versionFormat.cpp.o
[ 96%] Building NVCC (Device) object CMakeFiles/picongpu.dir/picongpu_generated_main.cpp.o
Scanning dependencies of target picongpu
[100%] Linking CXX executable picongpu
[100%] Built target picongpu
Install the project...
-- Install configuration: "Release"
-- Installing: /home/labs/malkalab/danle/picInput/FoilLCT/bin/cuda_memtest
-- Set runtime path of "/home/labs/malkalab/danle/picInput/FoilLCT/bin/cuda_memtest" to ""
-- Installing: /home/labs/malkalab/danle/picInput/FoilLCT/bin/mpiInfo
-- Set runtime path of "/home/labs/malkalab/danle/picInput/FoilLCT/bin/mpiInfo" to ""
-- Installing: /home/labs/malkalab/danle/picInput/FoilLCT/bin/picongpu
-- Set runtime path of "/home/labs/malkalab/danle/picInput/FoilLCT/bin/picongpu" to ""
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/egetopt
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/cuda_memtest.sh
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/pic-build
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/pic-edit
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/pic-compile
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/pic-configure
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/tbg
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/picongpu-completion.bash
-- Up-to-date: /home/labs/malkalab/danle/picInput/FoilLCT/bin/pic-create
/home/labs/malkalab/danle/picInput/FoilLCT