DESCRIPTION

Package: TCGAbiolinksGUI
Title: "TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data"
Version: 1.19.1
Date: 2016-10-28
Author: Tiago Chedraoui Silva <tiagochst@gmail.com>,
    Antonio Colaprico  <antonio.colaprico@ulb.ac.be>,
    Catharina Olsen <colsen@ulb.ac.be>,
    Michele Ceccarelli,
    Gianluca Bontempi <gbonte@ulb.ac.be>,
    Benjamin P. Berman <Benjamin.Berman@cshs.org>,
    Houtan Noushmehr <houtana@gmail.com>
Maintainer: Tiago C. Silva <tiagochst@gmail.com>
Description: 
    "TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data.
    A demo version of GUI is found in https://tcgabiolinksgui.shinyapps.io/tcgabiolinks/"
License: GPL (>= 3)
Depends:
    R (>= 3.3.1),
    shinydashboard (>= 0.5.3),
    TCGAbiolinksGUI.data
Suggests:
    testthat,
    dplyr,
    knitr,
    roxygen2,
    devtools,
    rvest,
    xml2,
    BiocStyle,
    animation,
    rmarkdown,
    pander
Imports:
    shiny (>= 0.14.1),
    downloader (>= 0.4),
    grid,
    DT,
    plotly,
    readr,
    maftools,
    stringr (>= 1.1.0),
    SummarizedExperiment,
    ggrepel,
    data.table,
    caret,
    shinyFiles (>= 0.6.2),
    ggplot2  (>= 2.1.0),
    pathview,
    ELMER (>= 2.0.0),
    clusterProfiler,
    parallel,
    TCGAbiolinks (>= 2.5.5),
    shinyjs (>= 0.7),
    colourpicker,
    sesame,
    shinyBS  (>= 0.61)
VignetteBuilder: knitr
biocViews: Genetics,
    GUI,
    DNAMethylation,
    StatisticalMethod,
    DifferentialMethylation,
    GeneRegulation,
    GeneExpression,
    MethylationArray,
    DifferentialExpression,
    Sequencing,
    Pathways,
    Network,
    DNASeq
RoxygenNote: 6.1.1