From 9de82b4c7872b13af0660d981440f92941567cf1 Mon Sep 17 00:00:00 2001 From: Stephanie Spielman Date: Tue, 14 Jan 2025 14:07:09 -0500 Subject: [PATCH] addidentally deleted an r --- analyses/hello-clusters/02_compare-clustering-parameters.Rmd | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/analyses/hello-clusters/02_compare-clustering-parameters.Rmd b/analyses/hello-clusters/02_compare-clustering-parameters.Rmd index 3bfc1c0a4..e5ffb6c5c 100644 --- a/analyses/hello-clusters/02_compare-clustering-parameters.Rmd +++ b/analyses/hello-clusters/02_compare-clustering-parameters.Rmd @@ -222,7 +222,7 @@ cell_metric_list <- cluster_results_list |> silhouette_df <- rOpenScPCA::calculate_silhouette(pca_matrix, cluster_df) # calculate neighbhorhood purity, starting from silhouette_df - OpenScPCA::calculate_purity(pca_matrix, silhouette_df) + rOpenScPCA::calculate_purity(pca_matrix, silhouette_df) } )