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replace NA with MB, To be classified #855

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Nov 24, 2020
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replace NA with MB, To be classified #855

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8 changes: 6 additions & 2 deletions analyses/molecular-subtyping-MB/03-compare-classes.Rmd
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Original file line number Diff line number Diff line change
Expand Up @@ -330,7 +330,9 @@ consensus.corrected.out <- consensus.corrected.out %>%

consensus.corrected.out <- consensus.corrected.out %>%
# adding "MB" to be consistent with other subtyping values
dplyr::mutate(molecular_subtype = if_else(!is.na(molecular_subtype),paste("MB,",molecular_subtype),NA_character_)) %>%
dplyr::mutate(molecular_subtype = if_else(!is.na(molecular_subtype),
paste("MB,",molecular_subtype),
"MB, To be classified")) %>%
write.table(
file = file.path(results_dir, 'MB_batchcorrected_molecular_subtype.tsv'),
row.names = F, quote = F, sep = "\t")
Expand Down Expand Up @@ -358,7 +360,9 @@ consensus.uncorrected.out <- consensus.uncorrected.out %>%

consensus.uncorrected.out <- consensus.uncorrected.out %>%
# adding "MB" to be consistent with other subtyping values
dplyr::mutate(molecular_subtype = if_else(!is.na(molecular_subtype),paste("MB,",molecular_subtype),NA_character_)) %>%
dplyr::mutate(molecular_subtype = if_else(!is.na(molecular_subtype),
paste("MB,",molecular_subtype),
"MB, To be classified")) %>%
write.table(file = file.path(results_dir, 'MB_molecular_subtype.tsv'),
row.names = F, quote = F, sep = "\t")
```
Expand Down
791 changes: 501 additions & 290 deletions analyses/molecular-subtyping-MB/03-compare-classes.html
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Binary file modified analyses/molecular-subtyping-MB/input/medulloblastoma-exprs-batch-corrected.rds
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Binary file modified analyses/molecular-subtyping-MB/input/medulloblastoma-exprs.rds
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32 changes: 16 additions & 16 deletions analyses/molecular-subtyping-MB/results/MB_batchcorrected_molecular_subtype.tsv
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Original file line number Diff line number Diff line change
@@ -1,10 +1,10 @@
Kids_First_Participant_ID sample_id Kids_First_Biospecimen_ID_DNA Kids_First_Biospecimen_ID_RNA molecular_subtype
PT_YHTK536P 7316-1714 NA BS_09Z7TC35 MB, Group3
PT_BPKVVWVB 7316-2250 BS_20X874J5 BS_1AYRM596 MB, Group4
PT_23NZGSRJ 7316-2659 BS_05S9WJW6 BS_1BWP5MCT NA
PT_23NZGSRJ 7316-2659 BS_05S9WJW6 BS_1BWP5MCT MB, To be classified
PT_FN4GEEFR 7316-3010 BS_E1VJCEWB BS_1QXEC43H MB, SHH
PT_85RSG67R 7316-2986 NA BS_1TWCV047 NA
PT_BG7GAFK6 7316-3626 BS_9BF58P80 BS_2SFTWNVE NA
PT_85RSG67R 7316-2986 NA BS_1TWCV047 MB, To be classified
PT_BG7GAFK6 7316-3626 BS_9BF58P80 BS_2SFTWNVE MB, To be classified
PT_1T7WF5S1 7316-2934 BS_HSYF7G2D BS_2Z1MKS84 MB, WNT
PT_62VNQ8C4 7316-1884 NA BS_3BDAG9YN MB, SHH
PT_HM2GMT2H 7316-6 BS_8YQGSMDK BS_3F5PR9GS MB, SHH
Expand All @@ -21,15 +21,15 @@ PT_H6E09982 7316-5 BS_9D39MFHT BS_5VQP0E6K MB, WNT
PT_39HBKSGG 7316-908 BS_Z5D6G1S6 BS_61E80SD6 MB, Group4
PT_D7KMPYTZ 7316-2133 BS_P3P96WCD BS_77317DY4 MB, WNT
PT_NCDHZ8H8 7316-2780 BS_DGG7YE8R BS_7C40TRCY MB, SHH
PT_SBP79T7F 7316-315 NA BS_7FWZ518S NA
PT_SBP79T7F 7316-315 NA BS_7FWZ518S MB, To be classified
PT_CQ7EGCMB 7316-3809 BS_PJ08ZW9A BS_7XQRH69M MB, SHH
PT_XA98HG1C 7316-931 BS_2J4FG4HV BS_81SP2HX4 MB, SHH
PT_GR8P8NY5 7316-178 BS_P99S85CY BS_8GW1TMV2 MB, SHH
PT_62VNQ8C4 7316-968 NA BS_8T7DZV2F NA
PT_62VNQ8C4 7316-968 NA BS_8T7DZV2F MB, To be classified
PT_VH6S71AC 7316-735 BS_8BD8WD38 BS_9M5XJ10G MB, Group4
PT_VJZN69T9 7316-3510 BS_7M6F9GQD BS_9NJHQE9F MB, Group3
PT_9YMRNZHH 7316-2178 BS_F8KR1QWE BS_9NZ2D6AD MB, Group4
PT_04YTK82N 7316-746 BS_3JE2T7AR BS_9PB3XH5D NA
PT_04YTK82N 7316-746 BS_3JE2T7AR BS_9PB3XH5D MB, To be classified
PT_BTTM2HS5 7316-2287 BS_PFXDWV9R BS_9V633J1X MB, Group3
PT_G1QNGVCZ 7316-1118 BS_JK5GTHVG BS_A14Z8BBK MB, Group4
PT_X1XVE1XX 7316-3511 BS_XNTQBZAJ BS_A87NPZAP MB, Group4
Expand All @@ -43,7 +43,7 @@ PT_DACV00WF 7316-489 BS_PVZJCXS1 BS_BVSW4GTG MB, SHH
PT_82MX6J77 7316-302 BS_8H2XX24V BS_CHDGRYHJ MB, Group3
PT_V8714N9H 7316-2322 BS_H1K33JVK BS_D144EJRQ MB, Group3
PT_RJ98S3KZ 7316-556 BS_MEPW36WF BS_DFWFBYSN MB, Group4
PT_F3S9PB94 7316-2240 BS_R1CV479M BS_E3BAT4C1 NA
PT_F3S9PB94 7316-2240 BS_R1CV479M BS_E3BAT4C1 MB, To be classified
PT_RH59ET3M 7316-1655 BS_KRYYDC2X BS_EFE4YEK3 MB, Group4
PT_7BJBEBZT 7316-1670 BS_164KRQJ0 BS_ERWT0ZWE MB, Group4
PT_9S6WMQ92 7316-95 BS_ZR75EKKX BS_FCAKKZ20 MB, SHH
Expand All @@ -56,18 +56,18 @@ PT_CXT81GRM 7316-1772 BS_3CG2N4PD BS_GS1KR5PK MB, SHH
PT_QYEF3JAT 7316-1460 NA BS_H4B5Y6S0 MB, Group4
PT_CWA1405H 7316-2252 BS_9YPJANGX BS_HB03GSHF MB, WNT
PT_EZS4SRH6 7316-676 BS_X1R0N8QS BS_HD4EJYE3 MB, Group4
PT_9DER14KH 7316-2230 BS_TNQKJZCP BS_HE57E1RP NA
PT_9DER14KH 7316-2230 BS_TNQKJZCP BS_HE57E1RP MB, To be classified
PT_DFXQFYPV 7316-2155 BS_DJEVCH34 BS_HF3RNN2T MB, Group4
PT_QW5VW2PY 7316-313 BS_A4KYP5H0 BS_HHPA8NJ2 MB, Group4
PT_DESHZ91V 7316-2009 NA BS_HKZENFDA MB, Group4
PT_G3AVDN4E 7316-2227 BS_RQ5Z7KNW BS_HTEPAKCM MB, Group4
PT_E4ECAFEN 7316-38 BS_1JMTTKMK BS_HZE3KYZ1 MB, Group4
PT_EDWA0XTP 7316-670 BS_WP2D11SK BS_HZRM07TW MB, Group4
PT_0WMP712K 7316-922 BS_KAZENYZE BS_J1AB8PMA MB, SHH
PT_TVK2KY36 7316-2626 BS_S34SCYW4 BS_J71N7D09 NA
PT_TVK2KY36 7316-2626 BS_S34SCYW4 BS_J71N7D09 MB, To be classified
PT_P4ZEFY19 7316-937 BS_QGX93WPF BS_J8G4SH4Z MB, Group4
PT_7KBMN6C2 7316-553 BS_HZHEF797 BS_JFB984RG MB, Group4
PT_8M6W215T 7316-305 NA BS_JR5ATB7G NA
PT_8M6W215T 7316-305 NA BS_JR5ATB7G MB, To be classified
PT_MSBPMJ56 7316-306 BS_40FX713C BS_JT82QGXF MB, Group4
PT_5F4N0CAP 7316-219 BS_G12HNXYX BS_JTMXAMB7 MB, WNT
PT_78NQ0QQS 7316-1651 BS_T8TCEBB1 BS_JZRM1S3T MB, WNT
Expand All @@ -81,14 +81,14 @@ PT_S4A0R1PM 7316-2699 BS_1S2BHJ8K BS_M15PW2N0 MB, SHH
PT_RFGZ2JGP 7316-135 BS_9CMJ3QF6 BS_M84H3KXA MB, WNT
PT_74XM7BV7 7316-312 NA BS_M86ECPHK MB, Group3
PT_K94ZVZMX 7316-521 BS_W3R2DQ86 BS_N4B1SZZH MB, WNT
PT_T03AT4BJ 7316-2708 NA BS_NKEAAFMW NA
PT_T03AT4BJ 7316-2708 NA BS_NKEAAFMW MB, To be classified
PT_RT1J9P8J 7316-307 NA BS_NKRYMHEP MB, Group4
PT_7FQ6VECA 7316-3846 BS_Y7CA8B5R BS_NZ71XCG3 MB, Group4
PT_M0AP3Z15 7316-14 BS_5BMNK8SY BS_QEYPFYHD MB, Group4
PT_CZRDBM1Q 7316-435 NA BS_QPPPGYP4 MB, Group4
PT_24DDXEB5 7316-1715 NA BS_QRDT19KS MB, Group4
PT_00G007DM 7316-272 BS_K07KNTFY BS_QWNBZ9RJ NA
PT_26V72ZXB 7316-3576 BS_QZT3SPY7 BS_R439VVPK NA
PT_00G007DM 7316-272 BS_K07KNTFY BS_QWNBZ9RJ MB, To be classified
PT_26V72ZXB 7316-3576 BS_QZT3SPY7 BS_R439VVPK MB, To be classified
PT_EGGY1XC0 7316-2865 BS_CSY11X7E BS_R6WNEEE4 MB, SHH
PT_WWZ2Q14R 7316-3138 BS_DVQYQSVW BS_RCC8BXVE MB, SHH
PT_NTEKMKTX 7316-1650 BS_PYVPKH11 BS_RD4D5F9F MB, SHH
Expand All @@ -102,11 +102,11 @@ PT_2FK75B27 7316-1700 BS_B3RH9V17 BS_TE0GVDNG MB, Group4
PT_9S6WMQ92 7316-278 BS_WY5KYSHJ BS_TW8DQH8J MB, SHH
PT_NV584F7Q 7316-3192 BS_X7QJCVJB BS_TYAYZ9ZW MB, Group4
PT_RFB07MZS 7316-2107 BS_N4B3WB8W BS_TZVFR600 MB, Group3
PT_KN25EYMG 7316-2309 BS_PVYMDM18 BS_V72H4RQS NA
PT_H3WWDMW9 7316-2118 NA BS_V96WVE3Z NA
PT_KN25EYMG 7316-2309 BS_PVYMDM18 BS_V72H4RQS MB, To be classified
PT_H3WWDMW9 7316-2118 NA BS_V96WVE3Z MB, To be classified
PT_CTSQ5FHH 7316-438 BS_HPMX6CT4 BS_V9HVBBDW MB, Group3
PT_2ZTXV44P 7316-310 NA BS_VA5T4KAA MB, Group3
PT_XX2VW3D9 7316-96 BS_0J5GC803 BS_VJVDJABP NA
PT_XX2VW3D9 7316-96 BS_0J5GC803 BS_VJVDJABP MB, To be classified
PT_5AF1501D 7316-309 NA BS_VMEX27TN MB, Group4
PT_STRDJQ01 7316-1038 NA BS_VPBMDMQX MB, SHH
PT_1NZGDP3P 7316-1104 NA BS_VT6C6N6K MB, SHH
Expand Down
40 changes: 20 additions & 20 deletions analyses/molecular-subtyping-MB/results/MB_molecular_subtype.tsv
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Original file line number Diff line number Diff line change
@@ -1,10 +1,10 @@
Kids_First_Participant_ID sample_id Kids_First_Biospecimen_ID_DNA Kids_First_Biospecimen_ID_RNA molecular_subtype
PT_YHTK536P 7316-1714 NA BS_09Z7TC35 MB, Group3
PT_BPKVVWVB 7316-2250 BS_20X874J5 BS_1AYRM596 MB, Group4
PT_23NZGSRJ 7316-2659 BS_05S9WJW6 BS_1BWP5MCT NA
PT_23NZGSRJ 7316-2659 BS_05S9WJW6 BS_1BWP5MCT MB, To be classified
PT_FN4GEEFR 7316-3010 BS_E1VJCEWB BS_1QXEC43H MB, SHH
PT_85RSG67R 7316-2986 NA BS_1TWCV047 NA
PT_BG7GAFK6 7316-3626 BS_9BF58P80 BS_2SFTWNVE NA
PT_85RSG67R 7316-2986 NA BS_1TWCV047 MB, To be classified
PT_BG7GAFK6 7316-3626 BS_9BF58P80 BS_2SFTWNVE MB, To be classified
PT_1T7WF5S1 7316-2934 BS_HSYF7G2D BS_2Z1MKS84 MB, WNT
PT_62VNQ8C4 7316-1884 NA BS_3BDAG9YN MB, SHH
PT_HM2GMT2H 7316-6 BS_8YQGSMDK BS_3F5PR9GS MB, SHH
Expand All @@ -21,17 +21,17 @@ PT_H6E09982 7316-5 BS_9D39MFHT BS_5VQP0E6K MB, WNT
PT_39HBKSGG 7316-908 BS_Z5D6G1S6 BS_61E80SD6 MB, Group4
PT_D7KMPYTZ 7316-2133 BS_P3P96WCD BS_77317DY4 MB, WNT
PT_NCDHZ8H8 7316-2780 BS_DGG7YE8R BS_7C40TRCY MB, SHH
PT_SBP79T7F 7316-315 NA BS_7FWZ518S NA
PT_SBP79T7F 7316-315 NA BS_7FWZ518S MB, To be classified
PT_CQ7EGCMB 7316-3809 BS_PJ08ZW9A BS_7XQRH69M MB, SHH
PT_XA98HG1C 7316-931 BS_2J4FG4HV BS_81SP2HX4 MB, SHH
PT_GR8P8NY5 7316-178 BS_P99S85CY BS_8GW1TMV2 MB, SHH
PT_62VNQ8C4 7316-968 NA BS_8T7DZV2F NA
PT_62VNQ8C4 7316-968 NA BS_8T7DZV2F MB, To be classified
PT_VH6S71AC 7316-735 BS_8BD8WD38 BS_9M5XJ10G MB, Group4
PT_VJZN69T9 7316-3510 BS_7M6F9GQD BS_9NJHQE9F MB, Group3
PT_9YMRNZHH 7316-2178 BS_F8KR1QWE BS_9NZ2D6AD MB, Group4
PT_04YTK82N 7316-746 BS_3JE2T7AR BS_9PB3XH5D NA
PT_04YTK82N 7316-746 BS_3JE2T7AR BS_9PB3XH5D MB, To be classified
PT_BTTM2HS5 7316-2287 BS_PFXDWV9R BS_9V633J1X MB, Group3
PT_G1QNGVCZ 7316-1118 BS_JK5GTHVG BS_A14Z8BBK NA
PT_G1QNGVCZ 7316-1118 BS_JK5GTHVG BS_A14Z8BBK MB, To be classified
PT_X1XVE1XX 7316-3511 BS_XNTQBZAJ BS_A87NPZAP MB, Group4
PT_VY45XTT7 7316-1801 BS_ZV21J6YW BS_AHEFXG7W MB, Group4
PT_PABK01H0 7316-1669 BS_185Q218S BS_AM70R8RG MB, SHH
Expand All @@ -43,31 +43,31 @@ PT_DACV00WF 7316-489 BS_PVZJCXS1 BS_BVSW4GTG MB, SHH
PT_82MX6J77 7316-302 BS_8H2XX24V BS_CHDGRYHJ MB, Group3
PT_V8714N9H 7316-2322 BS_H1K33JVK BS_D144EJRQ MB, Group3
PT_RJ98S3KZ 7316-556 BS_MEPW36WF BS_DFWFBYSN MB, Group4
PT_F3S9PB94 7316-2240 BS_R1CV479M BS_E3BAT4C1 NA
PT_F3S9PB94 7316-2240 BS_R1CV479M BS_E3BAT4C1 MB, To be classified
PT_RH59ET3M 7316-1655 BS_KRYYDC2X BS_EFE4YEK3 MB, Group4
PT_7BJBEBZT 7316-1670 BS_164KRQJ0 BS_ERWT0ZWE MB, Group4
PT_9S6WMQ92 7316-95 BS_ZR75EKKX BS_FCAKKZ20 MB, SHH
PT_YFS3AWC0 7316-153 BS_10V9SAG8 BS_FKDQJJB5 NA
PT_YFS3AWC0 7316-153 BS_10V9SAG8 BS_FKDQJJB5 MB, To be classified
PT_TKWTTRQ7 7316-2971 BS_06GEF6DB BS_G00FHF3Q MB, Group4
PT_PJSV0X4X 7316-843 NA BS_GCQFGDTX MB, Group3
PT_TKWTTRQ7 7316-407 BS_2RX2NF1Q BS_GE2RVZE6 MB, Group4
PT_45P9F9MD 7316-314 BS_0RF0G9SQ BS_GNV89A5P MB, Group4
PT_CXT81GRM 7316-1772 BS_3CG2N4PD BS_GS1KR5PK MB, SHH
PT_QYEF3JAT 7316-1460 NA BS_H4B5Y6S0 MB, Group4
PT_CWA1405H 7316-2252 BS_9YPJANGX BS_HB03GSHF NA
PT_CWA1405H 7316-2252 BS_9YPJANGX BS_HB03GSHF MB, To be classified
PT_EZS4SRH6 7316-676 BS_X1R0N8QS BS_HD4EJYE3 MB, Group4
PT_9DER14KH 7316-2230 BS_TNQKJZCP BS_HE57E1RP NA
PT_9DER14KH 7316-2230 BS_TNQKJZCP BS_HE57E1RP MB, To be classified
PT_DFXQFYPV 7316-2155 BS_DJEVCH34 BS_HF3RNN2T MB, Group4
PT_QW5VW2PY 7316-313 BS_A4KYP5H0 BS_HHPA8NJ2 MB, Group4
PT_DESHZ91V 7316-2009 NA BS_HKZENFDA MB, Group4
PT_G3AVDN4E 7316-2227 BS_RQ5Z7KNW BS_HTEPAKCM MB, Group4
PT_E4ECAFEN 7316-38 BS_1JMTTKMK BS_HZE3KYZ1 MB, Group4
PT_EDWA0XTP 7316-670 BS_WP2D11SK BS_HZRM07TW MB, Group4
PT_0WMP712K 7316-922 BS_KAZENYZE BS_J1AB8PMA MB, SHH
PT_TVK2KY36 7316-2626 BS_S34SCYW4 BS_J71N7D09 NA
PT_TVK2KY36 7316-2626 BS_S34SCYW4 BS_J71N7D09 MB, To be classified
PT_P4ZEFY19 7316-937 BS_QGX93WPF BS_J8G4SH4Z MB, Group4
PT_7KBMN6C2 7316-553 BS_HZHEF797 BS_JFB984RG MB, Group4
PT_8M6W215T 7316-305 NA BS_JR5ATB7G NA
PT_8M6W215T 7316-305 NA BS_JR5ATB7G MB, To be classified
PT_MSBPMJ56 7316-306 BS_40FX713C BS_JT82QGXF MB, Group4
PT_5F4N0CAP 7316-219 BS_G12HNXYX BS_JTMXAMB7 MB, WNT
PT_78NQ0QQS 7316-1651 BS_T8TCEBB1 BS_JZRM1S3T MB, WNT
Expand All @@ -80,33 +80,33 @@ PT_5FR2YA6E 7316-109 BS_VTTTQYQA BS_KYF0Q0E7 MB, Group4
PT_S4A0R1PM 7316-2699 BS_1S2BHJ8K BS_M15PW2N0 MB, SHH
PT_RFGZ2JGP 7316-135 BS_9CMJ3QF6 BS_M84H3KXA MB, WNT
PT_74XM7BV7 7316-312 NA BS_M86ECPHK MB, Group3
PT_K94ZVZMX 7316-521 BS_W3R2DQ86 BS_N4B1SZZH NA
PT_T03AT4BJ 7316-2708 NA BS_NKEAAFMW NA
PT_K94ZVZMX 7316-521 BS_W3R2DQ86 BS_N4B1SZZH MB, To be classified
PT_T03AT4BJ 7316-2708 NA BS_NKEAAFMW MB, To be classified
PT_RT1J9P8J 7316-307 NA BS_NKRYMHEP MB, Group4
PT_7FQ6VECA 7316-3846 BS_Y7CA8B5R BS_NZ71XCG3 MB, Group4
PT_M0AP3Z15 7316-14 BS_5BMNK8SY BS_QEYPFYHD MB, Group4
PT_CZRDBM1Q 7316-435 NA BS_QPPPGYP4 MB, Group4
PT_24DDXEB5 7316-1715 NA BS_QRDT19KS MB, Group4
PT_00G007DM 7316-272 BS_K07KNTFY BS_QWNBZ9RJ NA
PT_26V72ZXB 7316-3576 BS_QZT3SPY7 BS_R439VVPK NA
PT_00G007DM 7316-272 BS_K07KNTFY BS_QWNBZ9RJ MB, To be classified
PT_26V72ZXB 7316-3576 BS_QZT3SPY7 BS_R439VVPK MB, To be classified
PT_EGGY1XC0 7316-2865 BS_CSY11X7E BS_R6WNEEE4 MB, SHH
PT_WWZ2Q14R 7316-3138 BS_DVQYQSVW BS_RCC8BXVE MB, SHH
PT_NTEKMKTX 7316-1650 BS_PYVPKH11 BS_RD4D5F9F MB, SHH
PT_GR8P8NY5 7316-178 BS_P99S85CY BS_RSRPX3S8 MB, SHH
PT_BRTVGGRK 7316-2893 BS_QHTDJG77 BS_S1M423AB MB, Group4
PT_5JA1N2H4 7316-839 NA BS_S69QZAJR MB, SHH
PT_9S6WMQ92 7316-333 BS_1CZPVCXR BS_S6Q7NKA3 MB, SHH
PT_D1WJ3BJX 7316-358 BS_7PKPNFFK BS_SKGJ5SY9 NA
PT_D1WJ3BJX 7316-358 BS_7PKPNFFK BS_SKGJ5SY9 MB, To be classified
PT_B7QRTN72 7316-1802 BS_YH60H2FS BS_TA9WP4TH MB, Group4
PT_2FK75B27 7316-1700 BS_B3RH9V17 BS_TE0GVDNG MB, Group4
PT_9S6WMQ92 7316-278 BS_WY5KYSHJ BS_TW8DQH8J MB, SHH
PT_NV584F7Q 7316-3192 BS_X7QJCVJB BS_TYAYZ9ZW MB, Group4
PT_RFB07MZS 7316-2107 BS_N4B3WB8W BS_TZVFR600 MB, Group3
PT_KN25EYMG 7316-2309 BS_PVYMDM18 BS_V72H4RQS NA
PT_KN25EYMG 7316-2309 BS_PVYMDM18 BS_V72H4RQS MB, To be classified
PT_H3WWDMW9 7316-2118 NA BS_V96WVE3Z MB, SHH
PT_CTSQ5FHH 7316-438 BS_HPMX6CT4 BS_V9HVBBDW MB, Group3
PT_2ZTXV44P 7316-310 NA BS_VA5T4KAA MB, Group3
PT_XX2VW3D9 7316-96 BS_0J5GC803 BS_VJVDJABP NA
PT_XX2VW3D9 7316-96 BS_0J5GC803 BS_VJVDJABP MB, To be classified
PT_5AF1501D 7316-309 NA BS_VMEX27TN MB, Group4
PT_STRDJQ01 7316-1038 NA BS_VPBMDMQX MB, SHH
PT_1NZGDP3P 7316-1104 NA BS_VT6C6N6K MB, SHH
Expand Down
Binary file modified analyses/molecular-subtyping-MB/results/mb-classified.rds
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