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V18 release #849
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V18 release #849
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Co-authored-by: Jo Lynne Rokita <jharenza@gmail.com>
Co-authored-by: Jo Lynne Rokita <jharenza@gmail.com>
- add cohort update - add PNOC003 pathology diagnosis changes
* remove LGAT from HGG subtyping based on defining lesions * change order of operations add filtering at MAF step instead of later so that those samples are not captured in the final snv_lesions_df * Update README.md * update all files with module run I added a note to the shell script about installing BEDOPS locally as a requirement for that code to run.
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had some issues with file conflicts, closing |
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Purpose/implementation Section
What scientific question is your analysis addressing?
V18 data release
What was your approach?
What GitHub issue does your pull request address?
#750
Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.
Which areas should receive a particularly close look?
NA
Is there anything that you want to discuss further?
NA
Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?
no
Results
What types of results are included (e.g., table, figure)?
NA
What is your summary of the results?
NA
Reproducibility Checklist
Documentation Checklist
READMEand it is up to date.analyses/README.mdand the entry is up to date.Data Release Checklist